Hippoglossus stenolepis (Pacific halibut): 118119112
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Entry
118119112 CDS
T08308
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118119112 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118119112 (lrit1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
C2-set_2
LRR_EndoS
LRR_5
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
118119112
NCBI-ProteinID:
XP_035028715
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All DBs
Position
12:14495827..14500776
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AA seq
651 aa
AA seq
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MFLVLLLGLYVATGELVSPVSSCPSQCSCFYHNLSDGSKARSVICNDPDISLVPVGFPVD
TSKLRIEKTAIQRIPSDAFNYLSSLEFLWMSFNILSALNPDSFRGLFNLEELRLDGNALT
AFPWESIMDMPSLRLLDLHNNQLTSLPAEATTHIKNLTYLDLSSNNLLTLPAEVLSTWLA
VKPAQGPESSKMILGLHDNPWVCDCRLYDLVQFQKSPTLSVAFIDTRLRCSAPESVSGVL
FSDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRRGDGRALNGTVQQE
TSKEGITWSILSVPAVSYRDSGKYMCKATNYAGNAEAVISLIVSNTPKPEGNQTSSEKKA
KVKKSNQIGKAAYQEKLVARYLVPTSTPSSLPALDPGLPPGVGSESELASFSLADRATPG
PATSSNPDALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVTIEGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATGTQRLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKSKDIQDSYVTFE
TLSPGTKAKGLEGEYLNRMNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgttctgctcctggggctctacgtggccacaggtgaacttgtctccccagtg
agctcctgcccgtcgcagtgcagctgtttctaccacaacctgagtgatggatcaaaggcc
aggagcgtgatttgcaatgatcccgacatatctcttgtgcctgtcgggttccctgttgac
acgtccaagctgcggattgagaagacggccattcagcggataccaagcgacgcctttaac
tacctctccagtctggaattcctgtggatgtctttcaacatcctgtccgccttgaatccg
gacagtttccgtggattgttcaacctggaagagcttcgtctggacgggaacgccctcacc
gcctttccctgggaatctatcatggacatgcccagcctcagacttctcgatttgcacaac
aaccagctcacctcgctgcccgcggaggccaccactcacattaagaacctcacctacctg
gacctgtccagcaacaacctgctgaccctgcctgcagaggtgctgtccacctggctggcg
gtgaaaccagcgcaaggaccagagagctccaagatgatacttggtctccatgacaacccc
tgggtgtgtgactgccggctctacgacctggtccagttccagaagtccccaactctgtcg
gtggcattcatcgacacgaggctgcggtgttcagccccagagagtgtgtcgggggttctg
ttcagtgatgcagagctgaggcgctgtcagctgccacgcatccacacagccgtggcacga
gtccggagcgctgttggaaacaatgtgctgctccgttgtgggaccattggagtccccatc
ccggacctgacatggcgcaggggcgatggacgagccctcaatggaacagttcagcaggaa
acgtcaaaggaaggaatcacctggtccatcctcagtgttccagctgtgtcctatcgggat
tcagggaaatacatgtgcaaggccactaactatgcagggaatgccgaggctgtaatttct
cttattgtctctaacaccccaaagccagaggggaaccaaaccagtagtgaaaagaaggca
aaagtcaagaaatccaaccaaataggcaaagccgcctaccaggagaaactggtggccaga
tatttggttccaacctcgaccccttcatccctgcctgccctggatcctggccttccacct
ggggttggttctgagtctgaactagccagtttcagcctggctgaccgagccacaccgggg
cctgccacctcctccaacccagatgcactgctggatctggagaagacaaacctgagcaac
ttggctgccaacacctcgtcactgcagcaggacccagacagggtggtccggtcagtgaag
gtagtgggggacacagacaatacaatttctctgaactggagagcccctaaagccaagaac
actacagcctttagtgtgctgtacgctgtgtttggagagagggacatgaggaagatcaat
gttggggcgggacagaaccgtgtaaccatcgaagggctggtgcccaggaccaagtacatt
gcctgtgtgtgtgtgagggggctgatccccaagaaggagcagtgtgtgatattttccact
gatgaagcagccagtgccactggcacccagaggctgattaacgtgattgtgatcacagtg
gcctgtatcatcgcggtcccactcaccgtcatcgtgtgctgtggggcgctgaagagacgc
attcagaagtactggggaaagaaatccaaggacatccaagattcatatgtgacctttgaa
acgctgtcacctggtacaaaggccaaagggctcgagggcgagtatttgaacagaatgaac
ccagaggagtccaacaggctgctgtcggcccgctccagcctggactctgaggccacggct
aagatagagggacagcccaacgagtacttctgctga
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