Hippoglossus stenolepis (Pacific halibut): 118119130
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Entry
118119130 CDS
T08308
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1 isoform X1
KO
K09335
visual system homeobox protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118119130 (vsx1)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
118119130 (vsx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
118119130
NCBI-ProteinID:
XP_035028735
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All DBs
Position
12:24744693..24749026
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AA seq
362 aa
AA seq
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MTTRDEVGEEKPKVKMLSPGFGIDKSRLHAPGFRSKGFAITDLLGLESDLQARPQPGGAP
GLSAVCSGPGAEPHGAGGGLGGFSFPGGSLPLGLGFLCSLAAQQPPGAPCFLPGHLPLLQ
ARTESHYLHSLEAQRDNYSDEECLSDRNDPKSSGNSQKRKKRRHRTVFTSHQLEELEKAF
HEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVR
HSIPLPESILNSAKNGMMGSCAPWLLGEPHARMHKKSLEMAKKCSSPPASESTRSDSFNT
AERRGSEVREVEQGEELLEEEEELEEEVAIDLSSSSKQHHEDGGRSVPSPRRQSGGESDE
HS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgggacgaggtcggagaagagaagcccaaagtgaagatgttgtctccgggc
ttcgggatcgataagtcccgcctgcacgctcccgggttccggtctaaaggcttcgccatc
accgacctcctgggcctggagtcggacctgcaggcccggccgcagcccggaggagccccg
ggcctgtcggcggtgtgctccgggcccggggccgagccgcacggagccggcggcggcctc
ggaggcttctcgttcccgggaggatctctgccgctcggcctgggcttcctgtgcagcctg
gcggcgcagcagccccccggggctccgtgcttcctgcccggccacctgccgctgctgcag
gcccggaccgagagccactacctgcacagcctggaggcccagagggacaactactccgat
gaagagtgtctctcagacagaaacgaccccaagtcttcaggaaactctcagaagaggaag
aagaggagacaccggacggtgttcacctcccaccagctggaggagctggagaaagctttt
cacgaggctcattatccagatgtttacgcccgagagatgctcgccatgaagacagagctg
cccgaggacaggatacaggtctggtttcagaaccgtcgggcaaagtggcggaagcgtgag
aagtgttggggtcgcagcagcgtcatggcggagtacggcctctacggggcgatggtgaga
cattccatcccgctgcccgagtccatcctcaactccgcgaagaacggcatgatgggatcc
tgcgccccctggctgctcggtgagccgcatgcacgaatgcacaagaaatctttagaaatg
gccaaaaaatgttccagtcctccagcgtctgaatccactcgctcagactccttcaacacg
gcggagcgacggggcagcgaggtccgggaggtggagcagggggaggagctgttggaggaa
gaggaggagctggaggaggaagtggcaatcgacctgtccagctcctccaaacaacatcat
gaggacggagggaggagcgttccctcgccacggcgacagagcggcggcgagtcggacgaa
cacagctga
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