Hippoglossus stenolepis (Pacific halibut): 118119134
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Entry
118119134 CDS
T08308
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118119134
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
118119134
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GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_1
TPR_12
TPR_19
TPR_16
ANAPC3
TPR_8
TPR_7
TPR_11
TPR_9
TPR_17
TPR_Slam
TPR_CcmH_CycH
Coatomer_E
TPR_15
ARM_TT21_4th
TPR_10
NatA_aux_su
ARM_TT21_C
MIT
HAT_PRP39_C
DUF6584
Urocanase
Motif
Other DBs
NCBI-GeneID:
118119134
NCBI-ProteinID:
XP_047198343
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All DBs
Position
12:complement(6072285..6077520)
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AA seq
511 aa
AA seq
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MYPEALSTYRVMVKNRNCNYTGLLRLSMANIYVRQKNYPKAIKLYCKALDRTPNCHKKRR
MKIKQNIGVVFVHMCQYPDAICCFEEVMRESPNVTVGYNLVLCYYAIGDKMMRNGFEMLL
LAPLGTDDEAKHFPSEGDTCPNATIESMNDELHQTKEAQEKQAEKYIVTAAKLIAPAMET
SAAAGLDWCMNMVKNSQHSELASDLEFAKAIAQLKQKDFKPAFEILNKFHLKDSRVKGNT
ANNLSFRHFLDKNYDQAEEYAHLALKADPHNPAALINKGNAVFGKQDYERAVECYKEALT
NHSACTEALYNLGLCYKKLTCPEEALHCFLDLHSILRNDNQVIYQLVKLFELLGDNHQAI
EWLMHIISSTPTDPSALAKLGQLHDATGDKLQAYQYYYESFKLYPCSVEVIEWLAGYYIQ
TQSCGKAIKSFERAAVLQPTLVKWRLLVAACYRRNGDYQKALEKYKHIHCLFPEDIECLR
FLVNLCMDMGLKEVNNYKGKLEKAMRISEQL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtacccagaggccctgagcacctatcgggttatggtaaagaacaggaactgcaattat
actggcctactgagactcagcatggccaacatatatgtaagacaaaagaactaccccaaa
gccatcaagctctactgcaaggcactggatcggacccccaactgtcacaagaagaggagg
atgaagatcaagcagaatattggcgtggtctttgttcacatgtgccagtacccagatgcc
atctgctgttttgaagaggtcatgagagagagccccaacgtcacggtgggctacaacctc
gtcctgtgctactatgccattggtgacaagatgatgaggaatgggtttgagatgctactt
ttggcccctctgggcactgatgatgaggccaagcacttcccgtctgagggtgacacctgt
ccaaacgcgaccatcgagtccatgaacgacgagcttcaccagacgaaggaggcacaagaa
aaacaggcagaaaagtacattgtgaccgctgccaagctcatcgctccggctatggagact
tctgctgcagctggacttgactggtgcatgaacatggtgaagaattctcagcattctgag
ctcgccagtgacctggagtttgctaaagccatcgcccaacttaaacagaaggatttcaaa
ccagcatttgaaatcctgaataaatttcatttgaaggacagcagagtgaagggcaacaca
gccaacaacctctcttttcgtcacttcctggacaagaactatgaccaggcggaggaatac
gctcatctcgccttgaaggctgatccccacaacccagcagcactcatcaacaagggcaac
gcagtgttcggcaaacaggactatgagagggctgtggagtgctacaaagaggcactgacg
aatcattccgcctgcacagaggccctctacaaccttggtctgtgctataagaagctgact
tgtccggaggaggctctgcactgcttcctggatctccactccatcctgaggaacgacaac
caagtcatatatcagctggtcaaactatttgagcttctgggggataaccaccaggcgata
gaatggttgatgcacatcatcagttcaactcccaccgacccaagtgcactggccaagctg
gggcagctgcatgatgcaacaggagacaagttgcaggcttaccagtactactacgagtcc
tttaagctctacccttgcagcgtggaagtgattgagtggcttgcgggatattacatacag
actcagtcctgtgggaaggccatcaaatcctttgagagagctgcagtcctgcaaccgacg
ctggtgaaatggcggctcttggtggcagcctgctacaggagaaatggagactaccagaaa
gctttggaaaaatacaaacacatccactgcctgtttccagaggatatagaatgtctgcgt
ttcttggtgaatctgtgcatggatatgggactaaaggaagtcaacaactacaagggcaag
ttggagaaggcgatgaggatcagtgaacagttgtga
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