Hippoglossus stenolepis (Pacific halibut): 118119194
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Entry
118119194 CDS
T08308
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118119194 (npas4l)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118119194 (npas4l)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
PAS_4
HLH
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
118119194
NCBI-ProteinID:
XP_047198364
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Position
12:complement(7973565..7979252)
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AA seq
762 aa
AA seq
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MTIWCNSCKCHVRAPCTLPHHVHKPNMVSHRSTKGASKARRDHINHEIRKMRALLPTTHD
DQERLSYLHSMAAICTYIRKSVLLRGVLPGDGSHCSLPYEAFLQALHGFILVTTSHGKLV
YVSENVAEYLGLSMIDVLQGDTFYDMVEPFDVDDVKSNLDMENNSSTERSFICCMQTSKA
FKLHHSSYCSMLVRGSFQSVPLPRPSSSDATEPLFVALCTPTVNRLSSSDSSFCHSFTSV
HRLDMTYTQLSDSVLYYLGYSADEMTGRSWYSLVHPDDLSLSADSHRSIMDTDEGLQVEM
VLRLQCKDLSWAWAYTRANKDSECQGISCTNYIISETEARFLQKEIGSDAFRPSSPANSC
HIAAQQAPHSQTYNNTKSFKRQRTSDSQSEEPAGARVRRESEQGYVACVYSRGGSSPVPS
GDVPTALFTPPYSPASSGSPLQQEELSHDLLMDVHGYGDQLLSSPEASPSYYSYPEAALT
CHPRPSDSLPMAAEHSFDQAAFGAVRPPSPLSSSSPNYDFQSCTSNARLVPDCLSASDMC
GSPVECALHQDDFSLLEQPEGGDLLQVQHVPHHHVMHAHSSLLTPNQSPTSSESNQYNER
EQAEISILAQQISSLARSFDMYHTINPLQPTAHSPLPSAGDWSQHPPHPSVLPLKCDLVL
DDGVIDSILKDLDTATRKSSTSDPAVVSYTYQQGLVCSRSGPRHLEQEPLGPSTATPEET
LPAEQFTAMDPFSLQLARYDQNTGLHQLNHHMHISLQQGNLY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgactatatggtgcaactcctgcaagtgtcatgtgagggctccgtgcacgctccctcac
cacgtgcacaagcccaacatggtctcccacagatccaccaaaggagcgtccaaagcccga
cgggaccacatcaatcacgagatcaggaaaatgcgggctctgctgcccaccacccatgac
gaccaggagcgtctgtcctacctgcactccatggcagccatctgcacctacatcaggaag
tctgtcctcctccgaggagtcctccctggggacggatcgcactgttctctaccgtacgag
gcctttctccaggctctgcacggcttcatcctggtcaccacctcccacgggaaactggtc
tatgtgtcggaaaatgtagcagaatacctgggtctgtcaatgattgacgtgcttcaagga
gacactttctatgacatggtggaaccctttgatgtcgacgatgtaaaatcaaacctggac
atggaaaacaactcatcaacagagcgaagcttcatatgttgtatgcaaacctccaaggcc
ttcaagctgcaccacagcagctattgctccatgctggtcagaggcagcttccagtccgtc
cctctgccccgtccgtcctcctctgacgccaccgagcctctgtttgtggccctgtgcacc
cccacagtgaaccggctgagcagctccgactccagcttctgtcacagcttcaccagcgtc
cacaggctggacatgacctacactcagctgtcagacagtgttttatactatctggggtat
tcagccgatgagatgaccggtcgatcgtggtacagcctcgtccaccctgacgacctttcg
ctgagtgcagattctcacagaagtataatggacacagatgagggcctccaggtggagatg
gtactgagactccagtgcaaggatctgtcatgggcctgggcctacactcgagctaacaag
gactctgagtgtcagggcatcagttgcactaactacatcatcagtgaaacagaggccaga
ttcctgcagaaggaaattggcagcgatgccttcaggccatcatctccggcgaactcctgc
catattgcagctcaacaggcgccacactctcagacctacaataacactaaatctttcaaa
aggcagaggacttccgacagccagagcgaggagccagcaggtgccagagtgaggagggag
tcggagcaaggctacgtggcgtgtgtctactcccgaggtgggagctcacctgttccctcg
ggtgacgtccccaccgctctcttcacgcctccctacagcccggcctcctccggctcccct
ctgcagcaggaagagctcagccatgacctcctgatggatgtgcacggatacggggatcag
ctgctgtcctccccggaggcctctccctcctactactcctacccagaggcagcgctcacc
tgtcacccaaggccctccgactccctccctatggccgctgaacactcctttgaccaggca
gcctttggtgcggtcaggccgccctctccgctctcctcctcatctccaaactatgatttc
cagtcttgtacatctaatgctcgattggttccagactgcctgtcggcgtccgacatgtgt
gggagcccggtggaatgtgccctgcatcaagacgatttcagccttctagagcagccagaa
gggggcgaccttttgcaagtgcaacatgtgccccaccaccatgtgatgcatgcacactcc
agtcttctaacccccaaccagtctcctacgtcctcagagtctaaccagtacaatgagagg
gagcaggcagagatcagtattctggcgcagcagatttcctctctggccagaagctttgac
atgtatcacacgataaacccccttcagcctacggctcacagccccctgccctcagccggt
gactggtcccagcaccctcctcacccctctgtccttcctctcaagtgtgacctggtcctc
gacgacggtgtgatcgacagcatcctgaaagacctggacacggccacaagaaaaagcagc
acgtccgaccccgctgttgtgtcgtacacctatcagcagggtttagtgtgcagcaggagc
gggccccgtcatttggagcaggagcccctcggcccctccacggccaccccagaggagacg
ctgcctgcagagcagttcactgccatggatcccttcagtttgcagttggcacgctatgac
caaaacactgggttgcatcaactcaatcaccatatgcacattagccttcagcaaggtaat
ttatattaa
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