Hippoglossus stenolepis (Pacific halibut): 118119259
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Entry
118119259 CDS
T08308
Symbol
atrnl1a
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hsp04091
]
118119259 (atrnl1a)
Lectins [BR:
hsp04091
]
C-Type lectins
Others
118119259 (atrnl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_4
Kelch_3
EGF_LMN_ATRN
Kelch_5
Kelch_6
CUB
Kelch_2
PSI
EGF_TEN
NANM
EGF_Teneurin
EGF_2
TMEM100
Motif
Other DBs
NCBI-GeneID:
118119259
NCBI-ProteinID:
XP_035028953
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All DBs
Position
12:20871395..21047673
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AA seq
1400 aa
AA seq
DB search
MEHTGGMHLCTCTGSSTKGAWKTYLGFFVMLQLLLHAEASSVSKSCDKSCFSGRCVNGSC
ACDHGWVGDRCQHCQGRFKLTDLSGSLTDGPVNYKYKTKCTWLIEGYPNAALRLRFNHFA
TECSWDHMYVYDGDSIYAPLIAVFSGLVVAESGGNETVPEVVTTSGYALLHFFSDAAYNL
TGFTITYSINSCPNNCSGHGRCSTANLASGRVYCECEDYWKGDACDIPYCRDNCGSPDHG
YCDLTGEKLCVCNDSWQGPDCSLSVPSTEAFWTLPSVKPSAQSSGRASHQALLHSGLMWV
VGGYSFNYSNYHMVLNYNLESSTWDAVPVSSGPLHRYGHSLALHQDDIYMFGGKLESGPA
NVTDELWAFNIPRRTWSPRKPALPPPYALEGHTAHVVELSAGEAVMLIFFGYSPVYSYIN
KVQEYNIRSNSWQVVSAGGAVVQGGYGHSSVYDESSGCVFVHGGYKALNNNKYGLVDHMY
RYHVSTRTWLILRESGLARHLHSAALLSGTVLVFGGNTHNDTSLSNGAKCFSADFLAYDI
ACDEWSILPRPSLHRDANRFGHSAVVSNGSMLIFGGFSGVLLNDVLTYTPPSCRAFSNPA
LCAAAGPGLRCHWVKTRCFPWEPKPPDQILPAVICPSRPDSTDEQCFRFSDCASCTANTW
GCQWCEDRKCISSSSNCTVLTLELAQQHGGPLSLSPPPSMLSEHQLSLWKHGARRRGHSV
RDSFRCKRREEQECFRLANCRSCSLNVNCQWDQQQQECQALPGQLCGESWHHVDDACLRI
NSSKESYDNAQHYCKNLGGNIASLLTDKQVHFVLEELQRHQLQDKRLSPWVGLRKINVSY
WGWEDASPFTNTSLRWSPGEPSDSGFCAYLEQPLVAGLKANPCTATTDGLICEKPAGSPQ
SPSARPCKTPCALRSSCSNCTSQAMECMWCSSAHRCVDSSAYVISFPYGQCLEWQTQDCS
AQNCSGLRTCADCLESAECGWCGDPSNTGKGACTEGSYRGPLKPSSSRAGSRDRDMVLDQ
SLCTSDRGFNWAYIQCPACQCNGHSRCVNGSVCERCGNLTAGTHCQNCMAGYYGDPINGG
KCNACKCNSHANVCHVNTGKCFCTTKGIKGDQCQLCDSENRYLGNPLRGTCYYNLLIDYQ
FTFSLLQEDDRHYTAINFMATPEQANKNLDMSINASNNFNLNITWSLSSTAGTISGEEMP
IIARTNIREHRDSLSCEKFNFRLHHNITFYVYVSNFSWPIKIQIAFSQHNSIMDLVQFFV
TFFSCFLSLLLVAAVVWKIKQTCWASRRREQLMRERQQMASRPFASVAVVLEVGGDQEEL
LQALPKPIAMEPCWGSRAGVLTVLLYLPRVPSGTPPPGQCGIAIASALVDASQQRAMDFK
DRGLGLKHRKHTVHHQGTCV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaccggggggatgcacctctgcacctgcaccggttcgtccacgaagggcgcg
tggaaaacgtacctgggattctttgtgatgctccagctcctgctccatgcggaagcctcg
tctgtgtccaagtcctgcgataagagctgcttctcagggaggtgcgtcaacgggagctgc
gcctgtgaccacggatgggtcggggaccggtgccaacactgtcagggaagattcaaatta
accgacctgtcaggttccctcacagacggaccagtgaactataaatacaagaccaaatgc
acttggctaatagaaggatatcctaatgcagcactcaggctgcgcttcaatcactttgcc
accgagtgcagctgggaccacatgtacgtctacgacggagactccatttacgcccctttg
attgccgtcttcagcggtcttgtcgtagcagagagcggcggcaatgagacggtgccagag
gtagtgacgacctccggctacgctctgcttcacttcttcagcgacgcggcgtacaacctg
accggcttcaccatcacctactcgataaactcgtgtcccaacaactgttcgggccacggc
agatgcagcacggccaacctggcctctggtcgcgtgtactgcgagtgcgaggactactgg
aaaggagacgcctgcgacatcccgtactgcagagacaactgtggcagcccggaccacggc
tactgtgacctgaccggagagaagctctgcgtctgcaacgacagctggcaaggtccagac
tgttctctgtctgttccgtccaccgaggccttctggacgctgcccagcgtcaagccgtca
gcgcagtcgtcgggtcgagcgtcccatcaggcgctgctgcactctgggctcatgtgggtg
gtggggggttactccttcaactactccaactaccacatggttctcaactacaacctggag
agcagtacgtgggatgcggtgcctgtgagcagcggccctctccacagatacggacactcg
ctggctctgcaccaggacgacatctacatgtttggcgggaagcttgaatccggacccgcc
aacgtgaccgacgagctgtgggccttcaacatcccccgacgcacctggtcaccacggaaa
cccgccctgcctcctccctacgccctggagggacacaccgcccacgtggtggagctgtcc
gccggcgaggcggtgatgctcatcttcttcggctactcgccggtttacagctacatcaac
aaagttcaggagtacaacatcaggtcgaactcgtggcaggttgtgtccgccggcggcgcg
gtggtccagggaggatacggccacagcagcgtgtacgatgagtccagtggctgcgtgttc
gttcacgggggatacaaggccctgaacaacaacaagtacggcctggtggaccacatgtac
cgctaccacgtctccaccaggacatggttgatcctcagagagagtggtttggcgcgacac
ctccactcggcggcgctgctgagcggcacagttctggtttttgggggaaacactcacaac
gacacgtcgctaagcaacggagccaagtgtttctctgctgacttcctggcgtacgacatc
gcttgtgatgagtggtcaatcctccccagaccatcgctgcaccgggacgccaaccgcttc
ggacactctgctgtcgtgagcaacggctccatgttgatcttcggaggtttttccggcgtc
ctcctgaacgacgtgctgacctacacccccccgtcatgtcgggccttttctaacccagct
ctgtgtgccgctgctgggccgggccttcgctgccactgggtcaaaactagatgttttccc
tgggaaccaaaaccacctgaccagattctgcctgctgtgatttgtccttcacgacctgac
agcacggacgagcagtgtttccgcttctcggactgtgcgagctgcacggccaacacgtgg
ggctgccagtggtgtgaggacaggaagtgcatctcttcatccagcaactgtactgtgctg
actctggagctggcccagcagcatggcggccctctgtctctgtctccccctccatccatg
ttgtctgaacatcagctgagcttgtggaagcacggagccaggaggcggggacattcggtg
agagactcgttcaggtgtaaacgtcgggaggagcaggagtgtttccgactggccaactgc
aggagctgctcccttaacgtcaactgtcagtgggaccagcagcagcaggagtgtcaagcg
ctgcctggtcagctgtgtggagagagctggcaccacgtggacgacgcctgcctgaggatc
aactccagcaaggagagctatgataacgcgcagcactactgtaagaacctgggaggaaac
atcgcgtctctgctcacagacaaacaagtccactttgttctggaggagctgcagagacac
cagctgcaagacaagaggttgtctccgtgggtcggcctgaggaagatcaacgtgtcgtac
tggggctgggaggacgcgtcgcccttcaccaacaccagtctgcgctggtcgccgggcgaa
cccagcgactcgggcttctgtgcctacctggagcagccgctggtggccgggctcaaggcc
aacccctgcaccgccaccacggacgggctgatctgtgagaaacctgcagggagtcctcag
agtccgagcgctcgtccctgtaagacgccctgcgctctgcggtccagctgctctaactgc
accagccaggccatggagtgcatgtggtgcagcagcgctcatcgctgcgtcgactcctcg
gcctacgtcatctccttcccctacgggcagtgtctggagtggcagactcaggactgctca
gctcagaactgttcaggtctgcggacgtgtgccgactgtctggagagcgccgagtgcggt
tggtgcggtgaccccagtaacaccggtaagggcgcctgcacggagggatcctaccggggg
cccctgaagccttccagctccagggccgggtcccgagacagggacatggtgctggaccag
agtctgtgcacgtcggacagaggctttaactgggcctacatccagtgtccagcgtgtcag
tgtaacggtcacagcaggtgtgtgaacggcagcgtgtgtgagcgctgtgggaacctgacg
gcagggacgcactgccagaactgcatggccggttattacggcgaccccatcaacggaggg
aaatgcaacgcatgtaagtgtaacagtcatgccaacgtgtgccacgtcaacacggggaag
tgcttctgcaccaccaagggcatcaagggagaccagtgtcagctatgtgactcagagaac
cgttaccttggcaaccccctcagaggaacatgttattacaacctgttgatcgattaccag
tttaccttcagcttgctgcaggaagacgaccgtcactacacggccatcaacttcatggct
acacccgaacaggccaacaaaaatctcgacatgtccatcaacgcctccaacaacttcaac
ctcaacatcacctggtccttaagctccacagccggcaccatctctggtgaagagatgccc
atcatcgctcggaccaacatccgggagcacagagacagcctctcctgtgagaagttcaac
ttcaggcttcaccacaacatcaccttctacgtctacgtgtccaacttcagctggccaatc
aagatccagatcgccttctctcagcacaacagcatcatggacctggtgcagttcttcgtc
accttcttcagctgtttcctgtctctgttactcgtcgctgctgtggtttggaaaatcaag
cagacctgctgggcctcacgaagacgagagcagctgatgagagagcgacagcagatggcc
agtcgtcccttcgcctcggttgctgtggtgctggaggtgggcggcgaccaggaggagctg
ctgcaggcgttgccgaagcccatcgccatggagccgtgctgggggagcagagcaggtgtt
ctgacggtgctgctgtatctgcccagagtcccgtctggaacacctccgcctggacagtgt
ggtattgctatagccagcgccctggtggacgcatcgcaacagcgagcgatggactttaag
gaccgaggcctcggactcaagcatcgcaaacacactgtgcaccatcaagggacctgtgta
tga
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