Hippoglossus stenolepis (Pacific halibut): 118119382
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Entry
118119382 CDS
T08308
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118119382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118119382
03036 Chromosome and associated proteins [BR:
hsp03036
]
118119382
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118119382
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
118119382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
118119382
NCBI-ProteinID:
XP_035029197
LinkDB
All DBs
Position
12:14280047..14292788
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AA seq
1219 aa
AA seq
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MADPVAAVCEQLVKAVNVMMDAETSQIYRLEALKFYEEFKETNSFCVPCGLQLADKAQPA
VVRHFGLQILEHVIKFRWNNMQQQEKVQLKECAMQLLSNGTHSILEEESHIKDVLSRITV
EMIKREWPQHWPDMLKEMEALTSQGEAQTELVMLILLRLAEDVITFQALPAQRRRDIQQT
LTQNMENIFSFMMAILQLNVEDYRRLKGLPGHELKARAHCRVAVATLNTLAGYIDWVSLV
YITSGNCHLLEMLCLLLSEPELQLEAAECLLIAISRKGKLEDRKPFMLLFDDVAIHYILS
AAQSADGLAICKKSPESQAVEVVERRYIFLKRLCQVLCALGGQLCPLVGSDVEVEIPTNL
SKYMEALLSFTTHSSQFLKSSTLATWGALFRHETISKDAVVKEMAVKYLKASMTNLVKAG
FPSRDNSPSCEYSRVDFDSDEDFNSFFNSFRAQQGEVVRCASRVVPLEAFQIAAEWLQYQ
IASPIDIGDTTSKSAEGLCSLLSPSVVQWDAMTVFMECMVTQIFKSLEEEKLPIDQSMKL
LQAVLDYETKDPLILSCVLTNVSALFPFVLHRPHFLPQVLYKLFKAITFEVGQDTKAPRT
RAVKNVRRHACSSIIKICRDYPQFILPCFDMFYNHVKKLFSSDSALTHLEKSSLMESMVL
ISNQFKDFAKQKAFLDELMASVVAEWTSDEMKHVLSDPAVFLTFVGADQTVAEQSADADT
SGLNRGRLSFCLYAMLGVVKRARWPADLEEAKAGGFVVGYNPAGAPIYRNPCTAQFQLLL
PNLLALIRTHNSLFMPENMARLSETFSRVHDVMDAEKNVVLGLSQPPLDIYDSPVYRSNL
ERMQGFLSTVYDNCFHILGNVGLSLQQEFYTIDRLAEEIAGSAFVSLDHVPDHRLRPMIR
VFVRQLTLSCPQEYYNSLLCPLLGPLFAYMQQRLNSKWQVINQRTSVNGEEEEEVVCQES
QVTQEMLEEQLVRLLTRELLDLLSVSCISRKVPESAANKEEIEEEDMMTESVQMGCPQPT
EELTELGKCLMKHENIYMSLLTLAFTSLSWKDTTNCHRTASMVCWTLLRQVVGGNLLPEA
VTWFYTSVLRGLQVHGQHEVCNSTLSQLAMLIYENLRPRYMELRTVMTQIPNINLESLDQ
YDHRLVDPNAQKAGEKKRKDQFRKLIAGTVGKALCQQFRKEVHIRNLPSLFKKPKPDKDI
QNSEALGLAALFSPENISL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccggtggctgccgtgtgcgagcagctcgtcaaagctgtgaacgtgatgatg
gacgcggaaacgagtcaaatataccgactggaggccctgaagttttacgaggagtttaaa
gagaccaactccttctgtgtcccatgtggcttacaactagccgacaaagcccaaccagct
gtagtgagacactttggtttgcaaatcctggagcatgtcatcaagttccgatggaacaac
atgcagcaacaagagaaagtccagctgaaggagtgcgccatgcaactcttatcaaatggt
actcattctatcctggaggaggagagccatatcaaagatgtcctgtcccgaatcaccgtg
gaaatgataaagagagaatggcctcaacactggccagacatgctgaaagagatggaggct
ctcactagccaaggggaggcccagaccgagctggtgatgttgatcctgctgaggctggca
gaggacgtgatcaccttccaagcattgcccgcacagcgacgcagagacatccagcagacg
ctcacccaaaacatggaaaacatcttcagttttatgatggccattttgcaactcaacgtg
gaggactatcgtagactgaaaggactacctggacatgaactgaaagccagagctcactgt
cgagtcgctgtggctacgctgaacacacttgcaggctacattgactgggtgtcgctggtg
tacatcacctctggaaactgccatctactggagatgttgtgtttgctgctgagtgagccg
gagctgcagctcgaggcagcagagtgtctgctcatcgcaatcagccggaagggcaagctg
gaggataggaaaccattcatgctgctgtttgatgatgtggccatacactacatcctctct
gcagctcagtctgcagatggactggcgatatgtaagaaatcccccgaatcacaagcagtg
gaggtggtggagcggcgctacatctttctgaagaggctgtgtcaggtgctgtgcgctctc
ggaggccagctctgcccattagtgggttcagatgtagaggttgaaatacctacaaatctc
agcaagtacatggaagctcttttatccttcactacacattccagtcagtttttgaaatcg
tccactctggctacttggggagctttgttcagacatgagacgatatcaaaggatgcggtt
gttaaggagatggccgtcaaatacctcaaagcatctatgaccaaccttgtcaaggctggg
tttccatcgcgagacaatagtccaagttgtgagtactcccgtgtggactttgacagtgac
gaggacttcaactctttctttaattcttttcgagcgcagcagggagaggtggttaggtgc
gcatctcgtgttgttcccctggaggcctttcagatagcagcggaatggttacagtatcag
attgccagccctattgatattggggataccacatctaagtctgcagaaggcctgtgctcc
ctcctgtctccatctgtggttcagtgggatgcgatgactgtcttcatggagtgcatggtc
acacagatcttcaaaagtctggaagaggagaagctgccaatagatcagagcatgaagctg
ctgcaggccgtgctggactatgaaaccaaagacccgctcattttgtcatgtgtgctcacc
aacgtctcggccctcttcccgtttgtcctgcacagaccacacttcctgccacaggtcctc
tacaagctgtttaaagccatcacatttgaggtcggtcaggacactaaggcacctcggacc
agagctgtgaagaatgtgaggaggcacgcctgttcttctatcatcaaaatttgccgggat
tacccacagttcatcctgccttgttttgacatgttttacaatcacgtgaagaagctgttc
tccagcgactccgcgctgactcacctggagaaatcgtcactgatggaatcgatggtgctg
atcagcaaccagttcaaagactttgcgaagcagaaggcttttctcgacgagctgatggcg
tcagtggtcgcagaatggacgtcagatgagatgaaacatgtgctgtctgaccctgctgtg
ttcctgacatttgttggagctgatcagacggtggctgagcaaagtgcagatgcagacaca
tcgggtcttaatagggggcggctgagcttctgtttgtatgccatgctgggggtggtgaaa
cgggcgcgttggcctgcagacctggaggaagccaaggctggtggcttcgtcgtgggttac
aaccccgctggggcccccatctacaggaacccctgcactgcacagtttcagctcttgctg
cccaacctgttggctcttatcaggactcacaacagtctgttcatgccagagaacatggct
cgtctgagtgagaccttctctcgggtccacgatgtgatggatgcagagaaaaatgtggtc
ctgggtctctctcagcctcctctggatatttacgactctccggtgtacagaagcaatctg
gagcgcatgcagggatttttatccacagtctacgacaactgcttccatatcctgggaaat
gtaggtctgtccctgcaacaggagttctacaccattgataggttggctgaagaaatagcc
ggctctgctttcgtttccctcgaccacgtgcccgaccacagacttcgacccatgattcgg
gtgtttgtgaggcagttgacgctatcatgtcctcaggagtactacaacagcctactctgc
cccctgctgggccctctgtttgcctacatgcagcagagactcaacagtaagtggcaggtc
atcaaccagaggacttctgtaaatggcgaggaggaggaggaggtggtgtgtcaggagagc
caggtgacccaggagatgttggaggaacagctggtgcggctgctcaccagagagctgctg
gatcttctctccgtgagctgcatttccagaaaagtgcctgaatcagcagcaaataaggag
gaaatagaagaggaagacatgatgacggagtcggtgcagatggggtgtccccagcccaca
gaggagctgactgagctggggaaatgtcttatgaagcacgagaacatctacatgtccctg
ttgaccctggccttcacctcactgtcatggaaggacaccaccaactgccaccgcactgcc
tccatggtctgctggacacttctgcggcaggtcgtaggaggtaatcttctacctgaggca
gtcacatggttttataccagtgttcttagaggccttcaggttcatgggcagcatgaagtc
tgcaactcgaccctctctcagctggcaatgctcatctatgaaaacctgcgacctcgctac
atggagctgagaaccgtaatgacccagatcccaaacatcaatttggagtctctggaccag
tatgatcacaggctcgtggaccccaacgcccagaaggctggagagaaaaagaggaaagac
cagttcaggaagctcatcgcaggaactgttgggaaagctctgtgccagcagttcaggaag
gaggttcatatccggaatcttccatcgctctttaaaaagccaaagcccgacaaggatata
cagaacagtgaggcattaggcctggcagctctcttctccccggagaatatctccctgtag
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