Hippoglossus stenolepis (Pacific halibut): 118119395
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Entry
118119395 CDS
T08308
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118119395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118119395
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118119395
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
118119395
Messenger RNA biogenesis [BR:
hsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
118119395
Transfer RNA biogenesis [BR:
hsp03016
]
Prokaryotic type
tRNA degradation factors
118119395
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
CHX17_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
118119395
NCBI-ProteinID:
XP_035029231
LinkDB
All DBs
Position
12:complement(19665995..19673618)
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AA seq
770 aa
AA seq
DB search
MKNLLRLGASLARLHVRPCHQSVFSSHAQPRTAGVELGEKKLEISTGKFARFADGSAVVQ
LGDTSVMATAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRELGTTDNEILTSRLI
DRSIRPLFPSGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRVG
MVDGQLLINPTRAEMTSSSLNMILAGGPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IIHAIQQLAREQKVTKRTPVKVFSTPADMVEHVRQLANERIYAVFTDSKHDKISRDEAIN
KVRLDTEEDLKVKFPQAEQFEVIDSFNTVSKEVFRNLVLNEYKRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLCSVTFDSLESTVKADIITTALSGIKDKNFMLHYEFPPYAT
NEVGKVGGTNRRALGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACAGSLA
LMDAGVPISSAVAGVAIGLISKANAEKPTEIQDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIAGLPLKLVMEAIQQATVAKREILGIMNKCIVKPRGTRKENGPVIETVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPSPGAMNEAQDFISEICKDDQE
QQLEFGAIYTGTITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLDVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATIVKTLSEKQSISMGSNGSQPTGTES
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctgctgcggctcggagcgtctctcgcgcgcctccacgtgcggccctgtcac
cagagcgtgttcagcagccacgcgcagcccaggacggccggggtggagctcggggagaaa
aaactggagatttccacggggaagtttgcccggttcgctgatggatctgcagtcgttcag
ttgggggatacctcggtgatggcgactgctgtgagcaagaccaaaccttctccgtctcag
ttcatgcctcttgtggtggactacaggcagaaagctgctgctgcaggtcggatccccaca
aaccacctgaggcgggagctgggcaccaccgacaatgagatcctcaccagccgactgata
gacaggtcgatacgaccccttttcccttctggttacttttacgacactcagatcctctgt
aacctgctcgcagttgacggtgtcaatgatccagatgtgctggcaattaatgccgcttct
gctgctctggctctgtccgacatcccttggaacggacccataggtgccgtgcgtgtgggc
atggttgacggacagctgctgatcaaccccaccagggcagagatgacctccagcagtcta
aacatgattttggctggaggccccagcagtcaagtggtgatgattgaggcgtctgctgag
aacgtgctgcagcaggacttctgccatgcggtgaaggtgggagtcaaacacacccagcag
atcatacacgccatccagcagctggcgcgggaacagaaggtcaccaagcgcaccccagtc
aaggtcttttcaaccccggctgacatggtggaacacgttcggcaattagctaatgagagg
atctatgcggttttcactgattccaaacacgacaagatttctagagatgaagccatcaac
aaagttagactcgatacagaagaggatctaaaagtaaaattccctcaggctgagcagttt
gaggtcatcgattccttcaacactgtgagcaaagaagtgttccgcaacttagtgctgaat
gagtacaagaggtgtgatggaagggaattgacggctttgaggaacatctcttgcgacgta
gacctctttaagccgctccatggctccgccctttttcagagaggacaaacacaggtgctg
tgcagtgtcacattcgattccctggaatccactgtcaaagcagatatcatcaccacagct
ctgagtggaatcaaagacaaaaacttcatgcttcattatgaatttcctccatatgcaacc
aatgaagttggaaaggtgggcggcaccaacaggagagcgctcggtcatggggccctggct
gagaaggctctgagaccagtcattcccaaagacttcccattcactatccgggtcactgct
gaggtgttagagtcaaacggatcctcctcgatggcttcagcgtgtgcaggcagccttgca
ctgatggatgcaggtgttcccatctcctctgctgtggcaggtgtagccatcggcctcatc
tccaaggccaacgcagagaaacccactgagatccaagactacagattactcactgatatt
ctgggaatagaggattacctcggagacatggacttcaaactggcaggaacaaacaagggc
atcactgctttgcaggcggatgtgaagatagcaggtttgcctctgaagttggtcatggag
gcgatccaacaggccacagtggcaaaaagggaaatcttgggcatcatgaacaaatgcata
gtcaaaccaagagggacaaggaaagagaacggacccgtcatcgaaactgtccgggtgcct
gtttctagacgagctcgctttgttggtcccggaggctacaacctccgcaggttacaagct
caaacaggtgtgacaataagtcaggtggatgaggagactttctctgtgttcgctccgtca
ccgggagccatgaacgaagctcaagacttcatcagcgagatctgcaaagatgatcaggaa
cagcagctggagtttggagccatctacactggcaccatcactgaaataagagacattggt
gtgatggtgaaactttatcccaacatgagcgccgtcctgctgcacaactcacaactggac
cacaaacggatcaaacatccaagtgctttgggtttagatgtgggacagcagatacaggtc
aagtacttcggacgtgacccgacggacggtagaatgagactctcccgcaaggtgctccag
tctcctgctgcaaccatcgtcaagacattaagtgagaaacagagcatctccatgggttca
aacggcagccagccgaccggcaccgaatcatga
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