Hippoglossus stenolepis (Pacific halibut): 118119437
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Entry
118119437 CDS
T08308
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03430
Mismatch repair
hsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118119437 (mlh1)
03460 Fanconi anemia pathway
118119437 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118119437 (mlh1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
118119437 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
118119437
NCBI-ProteinID:
XP_035029322
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Position
12:6907421..6914232
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AA seq
735 aa
AA seq
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MAGVIRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKSSSIQVTVKDGGLKTLQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAHRANYSDGKMKGPLKQCAGNQGTQILVEDLFYNVSTRRKALKSPSDEHSRIVEVISRY
AIHNSGKSFCVKKHGQTVADVRTLPNASVVDNIRVVFGNAVSRELIEVCCEDPKLAYKMK
GYISNANYSMKKCILILFINHRLVESSALKKAIEAAYTAYLPKNAHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHIESKLLGTNSSRTYFTQTLLPGLSISGGTEVKSS
SATADSTERVYAHQMVRTDCRAQKLDAFLRPKEKPSPDPEAAGPSCKEAANKTTQPDGAE
WDGTGDADMLEALAQQEAEVPKGEEEESSVGSFDAQRKRPRKEQQLEEEEDADLTAAATP
KRRAIKLNSIKELRAEITENTHKGLQEMLQSHSFVGCVNPQWTLIQHHTKLYLLNTTKLS
QELFYQILIYDFGNYGVLRLSTPAPLYDLAMLALDSEDSGWTEEDGPKEGLAQYIVDFLK
KNAEMLQDYFSMEIDQEGNLRGLPLLLDKYTPVMEGLPMFILRLATEVNWDNEKDCFRDF
SKECSMFYSIRKQYILEPEPGEEQDDEANSWRWKVEHIIFKAFRTLFSPPKKFSEDGTVL
QIANLPDLYKVFERC
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtcatccggaggctcgacgagacagtggtgaacaggatcgcagcaggagaa
gtcatccagcgtcctgccaacgctgtgaaagaactgatagaaaactgtttagatgccaag
tccagcagcatccaggtgacggtgaaagatggaggactgaagacgctgcagattcaggac
aacggcacaggcatcaggaaagaagatatggaaatcgtctgcgagcgtttcaccaccagt
aagctccagacttttgaggacctgtcagctattgctacttatggatttagaggagaggcc
cttgcaagtataagccatgttgcacatgttaccataacgaccaaaacagctgatgccaaa
tgtgcacacagagccaactacagtgatggcaaaatgaaaggtccactcaaacaatgtgcc
ggaaaccagggaacacagattctcgtggaggacctcttctataatgtgtccaccaggagg
aaagctctaaagagccccagtgatgagcactccaggatcgtagaggtgatcagcaggtac
gccatacacaattcaggaaaaagcttttgtgtcaaaaagcatggacagactgtggcagat
gtgaggactcttcctaacgcatccgtagtggataatattcgagtcgtgtttggcaacgca
gtcagcagggagctcattgaagtttgctgtgaagatccgaagctcgcctacaagatgaag
ggctacatctcaaacgcaaactactcaatgaagaaatgcatcctgatcctcttcatcaac
catcgtctggtggagtcgagtgcgttgaagaaagcgatcgaggccgcttacaccgcttat
cttcccaagaacgcacatcctttcctttacctcagcctagagatcgccccacagaatgta
gacgtcaacgttcaccccaccaagcacgaggtgcatttcttacatgaagacagcgtcatc
gagagtgttcagaagcacatcgagagcaaactgctgggcaccaactcctcacgcacatat
ttcacacaaacgttgctgccaggcctgtcgatctcaggtggcacggaggtgaagtcctcc
agcgccacagcagattctactgagcgagtctacgcgcatcagatggtgaggaccgactgt
cgcgctcagaaactggacgcattcctccggccgaaagagaagccgtcccctgacccagag
gcagctggtcctagctgcaaagaggccgcgaacaaaaccacccagcctgacggcgcagag
tgggatgggacgggagatgcagatatgctggaggccttggctcagcaggaggcagaggtg
ccaaaaggcgaagaagaagaaagcagtgtcggcagttttgatgctcaaaggaagcgaccg
aggaaggagcagcagctagaagaggaagaagacgcggacctgacggctgcagccacgccc
aagaggcgagccataaaactgaacagcatcaaagagctgagagccgagatcactgagaac
acacacaaaggtcttcaggaaatgctgcagagccactcgtttgtgggctgcgtcaatccc
cagtggactctgatccaacatcacaccaaactgtacctgctcaacacaaccaaactcagt
caggagcttttctaccaaatactgatctacgactttgggaactatggtgtactaagacta
tctactccggctccgctctatgacctggccatgttggctctggacagtgaggacagcggc
tggactgaagaggacggacctaaagaaggcctggctcagtacatcgtggacttcctgaag
aagaatgcagagatgctgcaggattacttctccatggagatagaccaggaagggaatcta
cgagggcttcctcttctgcttgataagtacactcctgtcatggaaggtctccccatgttc
atcctgcgcctggccactgaggtgaactgggacaatgagaaggattgcttcagagacttc
agtaaagagtgcagcatgttctactccatcaggaaacagtacatcctggagcccgagccc
ggagaggagcaggatgatgaggccaactcgtggcgttggaaagtggaacacatcatcttt
aaagcttttcgaaccctcttcagtccgcccaagaagttcagcgaggacggcacggtgctg
cagatcgccaacttacctgatctctacaaagtgtttgagaggtgctga
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