Hippoglossus stenolepis (Pacific halibut): 118119457
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Entry
118119457 CDS
T08308
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118119457 (sorcs3b)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Others
Others
118119457 (sorcs3b)
Endosome - Lysosome transport
118119457 (sorcs3b)
Endosome - Golgi transport
118119457 (sorcs3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
118119457
NCBI-ProteinID:
XP_035029364
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All DBs
Position
12:16262883..16305081
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AA seq
1239 aa
AA seq
DB search
MELWSFWSFSLLAFALLCPLRLNFVAQAEISSPRANDRFYRLEVVPLEARGTRQPAEVLH
KVDNCAEVFGTEPDGGLKPDRGKKTRNETQKGLKQEAPIGVETAPNCANRLKIPGKKYDS
VSEDNLRRSTANIFQRKKKVKRSVGPEFSENVDMSISGGAQSRERFVETVQGASSSRGEH
RRTGEETRGSNPRQSEPYVDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLHDFNLGA
VTESSLWRSTDYGSTYTKLNHKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESAVLISSDE
GASYEKYPINFNILSLLFHPSQENWMLAYSHDSKLYSSMDFGRKWQLVHDDVMPGRFYWA
VMGLDKESDVVHIETRIAKGRAQYVKCRAQRCTEGNRQYPFPGDVDTNSLVVQDEYVFTQ
VTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYIS
DSPGVYFTLSLEDLRTSRGPAGNLLVDFYKVEGINGMYLTNKLVDNHIKTFITYNKGQKW
ALLPAPASDVAGNNIHCILPFCSLHLHLEMLENPYTSGPITSKKSVPGIIVATGNIGTAL
SSTNLGMFITSDAGNSWRQIFDEEHNIWFLDNGGALLAVSHAPTPIQHLWISLDEGKKWD
NHSFSAAPLFVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYMGLFSRRCMGGDYQKW
QLHNKGELCVMGEKQIFMKRRPGNRCMLAQDYSRIYSSEPCLCTAFDFECDYGWERQADG
KCSPAFWFNPNGAAKSCSSSQSFLNSTGYRKVLSNNCKEEGGKVYSPRRQACRPRAPRGL
RLSTNQGELSATVGSNVTFNVYLDDGDSPGTSIQLDFGDGIRIIYSNLSRTDDGIKHIYR
TTGIYRVAAAAENSQGSDSSTLFLHITSPVERVYLSAPIVAIRGKEANLTAVVWPSHTRT
LTFFWWFDNSSEPIITLEGSISYTFQREGINKVTVQVASGSTVMQDSKVITVKEFFRSLL
LSFSPALDEHNPDISEWREDIGRVVRTALSQVSGVPEDQLLVSLYPGLPTTAELFILPVE
HTSSEHKGSSEEPLELIADIFVTALNQDLIQFELKTDVRIIVYMTQQTLAPLVDSNAIHS
GSAMLMLLSVVFVGVAAFFIYKFKRKIPWIHVQTEDSHEKEPEVISTVGQNDNLSKVKLS
DFSAPKELMAKDLEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtggtcattttggagtttttcccttttggctttcgcgctgctctgccccctt
cgcctcaactttgtggctcaagcggaaataagttcaccccgagctaacgatagattttat
cggctggaggtcgtgccgctggaagcacgtggaacacgacaaccagccgaagtcttacac
aaagtcgacaattgcgcagaagtttttggaacggaaccagacggcggtttgaaaccggac
cgtggcaagaaaactaggaatgaaacacagaagggactgaaacaggaggcaccgatcggc
gtcgagacggcaccaaactgcgcgaatcgtctcaaaatacccggtaaaaagtacgacagc
gtttccgaggacaacttgaggcgaagtactgcgaatatttttcaaagaaagaagaaggtg
aagaggagtgtgggtccagaattcagcgagaatgtggatatgagtataagtggaggagcg
cagtcaagggagaggtttgtggagacggtccaaggtgcctccagctccagaggcgagcac
cggcgcaccggggaggaaacccgggggtccaaccccagacaaagtgagccttacgtggac
acgtccactttcgccctgtcgggagactctgcgcacaaccaggcgatggtgcactggtct
ggacacaacagcagcgtgatcctgatcttgactaagctgcatgacttcaacctgggggct
gtaactgagagctcactctggagatccaccgattacggaagcacctacaccaaactcaac
cacaaagtgggttcaaggacagtcctgagttacctgtacgtctgcccgaccaacaaacag
aagataatgatgctcagcgatccagaggtagagagcgccgttctcatcagttcagatgaa
ggagcgagctatgagaagtatcccattaacttcaacatcttgagcctgctcttccacccg
tcgcaggagaactggatgctggcttacagtcacgacagcaagctgtacagttcaatggac
tttgggaggaaatggcagttggttcacgatgacgtgatgccgggccgattctactgggcg
gtaatggggctggacaaagaatcggacgtggtccacatcgagacgcgcatcgcaaaaggc
cgcgctcagtacgtgaagtgcagagcccagcgatgcacagaaggcaacagacagtacccc
tttcccggagacgtagacaccaactcgctggttgtgcaggatgaatatgttttcacacag
gtaaccaagtcaggaagagccagctactttgtctcctacatgagggaatccttcaagcgg
atgaaactacctaaatattgtcttccaaaggacatgcatatcatcagcacagatgagaag
caggttttcgctgcagtccaggagtggaatcagaacaacacctacagcctgtatatctcc
gactcccccggggtctacttcaccctttcgttagaggatctgagaaccagtcgaggaccc
gccggtaacctgctggtcgacttttataaggtcgaggggataaatggaatgtatctcacc
aacaaactggtggataatcacatcaagactttcatcacctacaacaagggacagaagtgg
gcccttctgccggctcctgccagcgatgtggccggaaataacattcactgcattctgcca
ttttgctcgctgcatctgcatctggagatgttggagaatccctacacgtcaggacccatc
accagcaagaagtctgtacctggaatcatcgtggctacagggaatattggaacagcgctg
tcctccaccaaccttgggatgtttataacatctgatgcaggaaatagctggagacagatt
tttgatgaagagcacaacatttggtttcttgacaacggcggggctctgctggcagtctcg
cacgcaccgacgccgatccaacacttgtggatcagtctcgatgaaggaaagaagtgggac
aatcacagtttctctgcggcacctctgtttgtggatggggtcctgatggagccagaatct
gacaatcacattatcactttcttcgggcacttcagccatcggtcagagtggcagctgatc
aagatcgactacatgggcctctttagcaggagatgcatgggtggggattatcagaaatgg
caactgcacaacaagggggagctgtgtgtgatgggcgagaagcagatcttcatgaagcgc
aggccaggcaaccgttgcatgctggcccaggactattccaggatctattcctcggagccg
tgcctctgcacagcctttgattttgaatgtgattatgggtgggagcgccaggcggacggg
aagtgctcccctgctttttggtttaatccaaatggtgcggctaaaagctgtagcagcagc
caaagcttccttaacagcaccgggtatcggaaggttttgtccaataactgtaaggaggaa
ggggggaaggtttactcccccaggaggcaggcgtgtcgtcccagggcgccacgaggcctc
cggctctccaccaatcagggagagctcagtgccacggtcgggagcaacgttaccttcaac
gtctacctcgacgacggagactcgccggggaccagcatccagctagacttcggggacggc
atcaggatcatctactccaacctgagccggactgatgatggcatcaagcacatttacagg
acgaccgggatctaccgagtggcggcggcagctgaaaacagccagggatccgacagcagc
acactgttcctgcacatcaccagtccagtggagcgtgtatatctctccgctcctattgtt
gccatcagggggaaggaggctaaccttactgcagtggtttggccgagtcacaccagaaca
ttgaccttcttctggtggttcgacaacagctcagagcccattataaccttggagggaagc
atctcatacacgtttcagagggagggaataaacaaggtcaccgtccaggttgcttctgga
agcaccgtaatgcaggattccaaagttataacagttaaagagttcttcaggtcgctgctg
ttgtcgttctcgccggcgcttgacgagcacaatcctgacatctctgagtggagggaggac
ataggccgcgtggtgcggacagctctgtcacaggtgtcgggggttcctgaagatcagctg
ctggtgtctctgtacccgggacttccgaccacagcggagctcttcatcctgcccgttgaa
cacacatccagtgaacacaaaggaagcagcgaggagcctctggagctgatagcagatatt
tttgtcactgccctgaatcaagacctgatccaatttgagctgaaaactgacgttcgcatt
attgtctacatgactcagcaaactctggcaccacttgtggattcaaacgccatccacagt
ggctcggccatgctgatgctgctctccgtggtattcgttggcgtcgccgcgttcttcatc
tacaagttcaaaaggaaaatcccttggatccacgtccagactgaggacagccacgagaag
gaaccggaggtgatcagcacggtcggtcagaacgacaacttgtccaaagtgaagctcagc
gatttttcggctccgaaagagctcatggcaaaagatctggaggccagaagcagaggagga
attggaagaaacatggagagaattgtaacgagggaatttccaaactgtactaatgtctaa
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