Hippoglossus stenolepis (Pacific halibut): 118119520
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Entry
118119520 CDS
T08308
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118119520
04082 Neuroactive ligand signaling
118119520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118119520
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118119520
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118119520
NCBI-ProteinID:
XP_035029497
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Position
12:5315785..5369069
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AA seq
460 aa
AA seq
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MAVSASGWTVFTILLISRLLESSLINAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLIFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNASVSGLDTLQLAQYTVEDYYTSVSEAIYETGQYPKLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARVCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLSYMDPHMLMYRHQMHDFDDDMNGIITTIST
HASRAKRRKEPAATPSTAPNSTELTVRPSSPSGSEPKPEASPPKPVNWCLTALATVRKVL
RSINCCHVENPHHIDNYSRVTFPLSFVMVNLLYWTYYLYF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtcggcatcaggatggaccgtgttcaccattctcctcattagcaggttgtta
gagagctcattgatcaacgcagaagtgaaggaaggagagattctgcctcctaccattcaa
aagctgatgaaaggatacaacaagtacctaaggcctttctttgacaatggtccagtaaca
gtgggcatgagcttggatatcgccagcattgatacgatctcagagatcaacatggactac
accgccaccatcttcctccgccagcgctggacagacgagcgcttgatattcgaaggcaac
aagagcctgagtctggacgggcggctcgtggagctcctctgggtccccgacacctttatc
gtggactccaaaaagtccttcctccatgacatcaccgtcgagaacagactgatccgcatc
ttccccaatggaaccgttctgtacgctctaaggattacgaccactgttgcgtgcaacatg
gatctgaccaagtatccgatggacaagcagacctgcacgttacaactggagagctggggt
tataacattaatgatgtcatgttctactggaccagaggaaatgcgtccgtcagtggtttg
gacacactgcagctggctcagtacacagtcgaggattactacacatctgtctcagaggcc
atctatgaaaccggccagtaccccaagttggttttccactttgagctgaagaggagcatt
ctgtacttcatcctggagacctacgtcccctccagcctgctggtggtcctctcatgggtt
tccttttggatctctctgtcctctgttccagcacgggtttgtatcggagtgaccacagtg
ctgaccatgaccactctgatgatgggagcccggacatcactgcccaatgccaactgcttt
atcaaggccatcgatgtctacttgggaatctgcttcagctttatctttggcgcgctcatt
gagtacgccgttgcccacttctgcaccctctcatacatggacccacacatgctcatgtac
cgccaccaaatgcatgactttgacgatgatatgaacggcatcatcaccaccatctccacg
catgccagcagagccaagagacgtaaggagcctgccgcgactccctccacagctcctaac
tccacagaactcactgtcagaccctccagcccttcgggcagcgagccaaagcctgaggcg
tcgccaccgaagcccgtcaactggtgcctcactgctctggccaccgttcgtaaagtgctc
cgctccataaactgctgtcatgtggagaaccctcaccacatagacaactactcgagagtc
accttcccactgtctttcgtcatggtcaatctgctctactggacatattatctgtacttc
tag
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