Hippoglossus stenolepis (Pacific halibut): 118119526
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Entry
118119526 CDS
T08308
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118119526
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
118119526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
118119526
NCBI-ProteinID:
XP_047198432
LinkDB
All DBs
Position
12:22921743..22971272
Genome browser
AA seq
1312 aa
AA seq
DB search
MDLWSKKVRGIIPRLALVLLCSCGATGGDVCHSSLVSNLLPSSFRSSSLLSASHGPGFAK
LNRREGAGGWSPLSSDRYQWLEVDLGRRTEITAVATQGRYGSSDWLTAYLLMFSDTGHNW
KQYRQEDNIWAFPGNSNADSVVQHKLQHPVIARYVRLVPLDWNPNGRIGLRLETYGCPYN
SDVVSFDGHSSLLFKLSPRPRPTTRESISLKFKTLRNSGTLLRAAGRSERSLTLELEEGK
LLLVLRKGRSSSAAGRQLVSLGSLLDDQHWHQVTVEHHSNHLNFTVDKSTERLQIPPGLA
HWDHDQMSVGADHDLGSRGSFGSDRNFCGCLENLIYNGVNLVELAQQRDQRVAVKGNVTF
SCAEPIFVAVTFTGPRSFLWLTRAAAASSTGLTVGLQFRTWNKAGLLLTFELPNHGGAVW
LYLSKAALHLQTHKPGRAPLELDAGSALNDGQWHSVVLTSRRGHLTLAVDGDEGAAAQAS
PSFVVTTAQLFFGGCPSEGSSQECMNPFKVFQGCMRRLTVDNQHLDLIKVQQRLLGNYSH
LQVDMCGIIDRCSPNHCEHGGSCSQSWSTFHCNCSGTSYSGATCHSSIHEPSCEAYKHKG
NTSGSYYIDVDGSGPIGPQLIYCNVTEDVTWTVIQHNNTELTRVRPSPGKTRHSAHFEYA
AKDEQLAAVVGQSEHCEQELTYHCRRSRLLHAPDGSPLSWWVGGPGEGHRQTHWAGAPPG
SQRCSCSLRQTCVDPKHHCNCDADRTDWANDSGLLTHKENLPVRSLVLGDVHRPGSEGAY
RVGPLRCHGDKNVWNAAFFDKETSYLHFPTFHGELSADISFLFKTTSSSGVFLENLGIKD
FIRIELSSSTEVLFSFDVGNGPLEVGVKAAFPLDDNRWHRIRAERNVKEATLRLDELPAA
AQEAPADGHIHLQLNSQLFIGGTASRQKGFRGCIRALQLNGVTLDLEQRARITPGVQAGC
PGHCSSYGSLCQNQGRCVERTSSFSCSCGPSAYTGAFCDREVSASFKAGTSISYTFKEQA
ATGPSRSSGVPSSIYSDVTLRAENISLSFRTSQSPSLLLYVSSSHSEYLALLLDKHEKLE
VRYRLDSSRDAEILRSKARNLANGHLHTVTISRRADAVSVQIDQDTEDDFNLTSDVEFNG
IRLLTLGRVHHPGEMDPELARLGSLGFTGCLSAVLFNSISPLKAALLHPDTSPVTVTGPL
VPSICGSTSTNPHPAETTHHQSGQSGPVETGQPLVNAMRTDSALIGGVIAVVIFVAVSAL
AVTARLLYGRRGGTCQSQEIKTVKPEDSPELPFSSQTSSHNIPSENQREYFI
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggatctctggagtaaaaaagtgcgaggaattatcccccggctcgccctggttcttctg
tgctcctgcggggcgacaggaggagatgtgtgtcacagttcgctggtgtccaatctgctc
ccatcgtccttcaggagctcctcacttctgtctgccagccacggaccaggcttcgcgaag
ctgaaccggagagagggcgctggaggttggtctcctctgagttccgaccggtatcagtgg
ttggaggtcgacctcgggcgacgcacagaaatcaccgccgttgccacgcaaggtcgctat
ggaagctccgattggctgacagcctacctgctgatgttcagtgacacgggacacaactgg
aagcagtatcgacaggaggacaatatatgggcctttccaggaaacagtaacgcagacagt
gtggttcagcacaagctccagcatccggtcatcgctcgctacgtccgcctcgtccctctg
gactggaaccctaacggacggatcggactccggctggagacgtacggatgtccctacaac
tctgacgtggtgagcttcgacggccacagcagcctcctcttcaagctgagtcccaggccg
aggccgacgaccagggagagcatctctctgaagttcaaaaccctgaggaattctgggacg
ctgcttcgtgcggcgggtcggagcgagcgcagcctcacgctggagctggaggagggaaag
ctgctgctcgtcctgcggaaaggcaggagctcgtctgcagccggtcggcagctggtgtct
ctgggcagcctgttagacgatcagcactggcaccaggtcaccgtggagcatcacagcaat
cacctcaacttcaccgtggacaagagcacagagcggctgcagatccctccaggactcgcc
cactgggaccatgatcagatgagcgtgggcgccgaccacgacctcggctctcgcgggtcg
ttcgggtcggaccgaaatttctgcggctgtttggaaaacctcatctacaacggcgtgaac
ctggtggagctcgctcaacagagggaccagcgggtcgctgtgaagggcaacgtgaccttt
tcctgtgctgaacccattttcgtcgccgtgacgttcaccggcccccggagcttcctctgg
ttaacgagggcggccgcagcgtcatcgacggggctgacggtggggcttcagtttcggacg
tggaacaaggccgggctgctgctgacctttgaactcccaaaccacgggggtgcagtctgg
ctgtacctgagcaaagccgcgctccacctccagacccacaagcccggcagggcgccgctg
gagctcgacgcaggttcagctctgaacgacggtcagtggcactccgtggtcctgacctcc
agacgaggacatctgaccctcgcagtggacggagacgaaggagccgctgctcaggccagt
ccctcgtttgtcgttaccacagctcaactcttcttcgggggttgtccctctgaaggcagc
agccaggagtgcatgaaccccttcaaggttttccagggatgcatgcgtcggctgaccgtg
gacaaccaacatctggatctgatcaaggtgcagcagaggctgctgggaaactacagtcac
ctgcaggtcgacatgtgtggcatcattgacaggtgttccccgaatcactgtgaacacggt
ggctcctgcagtcagtcgtggagcaccttccactgcaactgctccggcaccagctacagt
ggagcaacctgtcacagctcgatacacgagccgtcctgtgaggcgtacaaacacaaaggc
aacacgtcggggtcttattacatcgatgtggacggcagcggccccatcggacctcagctc
atatactgcaatgtgacagaggacgtgacgtggacggtgattcagcacaacaacaccgag
ctgaccagagttcgaccgtcgccgggaaagactcggcactcggctcactttgagtacgcc
gccaaagacgagcagctggccgccgtcgtgggccaatcggagcactgcgagcaggagctg
acctaccactgcaggaggtcacgtcttctccacgcaccagacggctcccctctcagctgg
tgggtggggggtccaggtgaaggtcacagacaaacccactgggccggagcccccccgggc
agccagcgctgctcctgcagcctgcgtcagacctgtgtcgaccccaaacaccactgcaac
tgtgacgctgaccgcactgactgggccaatgactcgggcctgttgacccacaaggagaac
ctgcccgtcagatccctggttctgggcgacgtgcaccggcccggctcggaaggcgcctac
agggtaggaccactccgttgccatggagacaaaaatgtctggaacgctgccttcttcgac
aaggagacatcgtacctccactttcccaccttccacggagagctgagcgccgacatctcc
ttcctctttaagaccacttcatcctccggcgtcttcctggaaaacttgggcatcaaggac
ttcatccggatcgaactcagctcctccactgaggtcctcttctccttcgacgtgggtaac
ggtccgctggaggtcggcgtgaaggccgccttccccctcgatgacaacaggtggcatcgc
atccgagccgagcgcaacgtcaaggaggcgacgcttcgccttgacgagctccccgctgcc
gctcaggaggctcctgctgacggacacattcacctgcagctgaacagtcaactattcata
gggggcacagcgtccaggcagaagggcttccggggatgtatccgtgctctgcagctgaac
ggcgtcaccctggacctggagcagagagccaggatcacccccggggttcaggcgggatgt
ccgggccactgcagcagctacggctccctgtgccagaaccagggccgctgcgtggagaga
accagcagcttctcctgcagctgtggcccgtcggcctacaccggagccttctgcgaccga
gaggtctcagccagcttcaaggcgggcacctccatcagctacacgttcaaggagcaggcg
gcgaccgggccgagcaggagcagcggcgtgccgtcctccatctactccgacgtgaccctg
agagcagagaacatctccctgagcttcaggaccagccagagtccgtcgctgctgctctac
gtcagctcctcccacagcgagtacctggctctgctgctcgacaagcacgagaagctggag
gttcgttacagactcgacagcagcagagacgcagaaatcctgaggagcaaagcgaggaac
ctcgccaacgggcatctccacacggttactatcagcagacgggcagatgctgtttctgtg
cagattgaccaggacaccgaagacgacttcaacctgacgtctgacgtggaattcaacggc
atcaggttgctgactcttggcagagtgcaccaccccggggagatggatccggagctggct
cggctcggctcgctgggtttcaccggctgcctctccgccgtcctcttcaactccatcagc
cctctgaaggccgccctgctccacccggacaccagccccgtcacggtcaccggcccgctg
gtcccgtccatctgcggctccacttcaacaaatccccatccagcagaaaccacacatcac
caatcaggtcagtctggacccgtggagacaggtcagccgttagtcaacgccatgaggacg
gactcagctttaattggaggtgtgatagcggtggtgatctttgtcgcggtgtctgcgtta
gccgtaacggccagactcctctacgggcggcggggggggacgtgtcagagccaggaaata
aaaacagtcaaacctgaagacagccccgagctgccgttcagcagccagaccagctcgcac
aacatccccagtgagaaccagagggagtatttcatttag
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