Hippoglossus stenolepis (Pacific halibut): 118119648
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Entry
118119648 CDS
T08308
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00100
Steroid biosynthesis
hsp01100
Metabolic pathways
Module
hsp_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
118119648 (lss)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
118119648 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
118119648
NCBI-ProteinID:
XP_035029652
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Position
13:complement(3553679..3561602)
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AA seq
735 aa
AA seq
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MTEGTHLRRRGGPYRTEPATDLSRWRLTNAEGRQTWRYVEDQETPDREQTVLEAHSLGID
TSELVCGSPAAHTAVDVALKGMHFYSHLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
PGAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTSLRILGLEPDDPDMVRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPSWMPAHPSTLWCHCRQVYLP
MSYCYAVRLAAEEDSLVLSLRQELYVQDYASISWPAQRNNVAACDMYTPHSSLLTAAYMV
LNVYEAHHSTTLRGMAARELYEHIQADDRFTKCISIGPISKTINMLVRWYVDGPTSPVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDDPRLSKCLQDAHHFLA
ITQIPENPPEYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCPSISQHVP
SDRLYDAVNVLLSMRNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALRHFQKVYPEHRAEEISSTLRAGLEYCRRVQRPDGSWEGSWGVCFTYGIWFGLEAFACM
GHVYGDEDVCVEVQKACQFLLEWQMPDGGWGEDFESCEQRRYVQSSAAQIHNTCWALLGL
MAARHPDRRAIERGVQLLIDKQLPTGDWPQENIAGVFNKSCAISYTSYRNVFPVWTLGRF
SALYPGSPLAGKVKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggggacgcacttgcggaggcgcggggggccgtacaggacggagccggccaca
gacctgagccgctggaggctgactaacgctgagggcagacagacctggcgctatgtggag
gaccaggaaacccccgacagggagcagaccgtgctggaggctcactcactaggcatagac
acgagtgagttggtgtgtggatccccggctgcgcacacggccgtggacgtggctctgaaa
gggatgcacttctacagtcacctccaggcggaggacggtcactgggcgggggactacggc
ggacctctcttcctgctcccaggcctcctgatcacctgccacgtggctaagatccctctg
cccggggcctggaagaaggagatggtgaggtacttgcgctccgttcagctgccagatgga
ggctggggtctacatattgaagataagtcgacggtctttggcacagcactgagttacacc
tccctcaggatcctgggactagagcctgatgacccagatatggttcgagccagaaataac
ctgcacagcaaaggcggtgcagtggggattccctcgtggggcaaattctggttggccatt
ttaaatgtgtacagttgggaaggaatgaacacgctcctgccagagatgtggctgttcccc
tcttggatgccggcccacccctccactctgtggtgtcactgtcgccaggtctacctcccc
atgagctactgctacgctgtcagactggcggctgaggaggactccctggtgctcagcctc
agacaggagctttatgtccaagactatgcctccatcagctggccggctcagaggaacaat
gtggcagcatgtgacatgtacacacctcacagctcgttactcaccgctgcctacatggtg
ttgaatgtgtacgaagcccatcacagcaccacgctgagaggaatggctgccagagagctg
tacgagcacatccaggctgacgaccgcttcactaagtgtatcagcatcggaccgatctcc
aagaccatcaacatgctggttcgctggtacgtggacggtccgacctccccagtgtttcag
gagcacgtgtccaggatcccagattatctctggctggggctggatgggatgaaaatgcag
gggaccaatggctctcaactgtgggacacttgttttgctgtgcaggctttcctcgaggca
ggagcccaggacgaccccaggctatcgaagtgcctccaagacgctcatcactttctcgcc
ataacacagataccggagaatcctcctgaatacaagaaatactacagacaaatgaacaag
ggaggcttccccttcagcacccgggactgtggctggattgtggccgactgcacggccgag
ggcctgaagtcagtgatgctgctgcaggagctgtgtccctccatcagccagcatgtcccc
tctgaccgtctctatgacgccgtcaacgtgctcctgagcatgaggaactccgacggtgga
tttgccacatatgagaccaagaggggagggagactcctggagctgctcaacccatcggag
gtgtttggtgacatcatgatagattacacctatgtggagtgtacgtcagcggtgatgcag
gctctgaggcacttccagaaggtctaccctgaacaccgagcggaggagatcagctccact
ctgagagcgggactggagtattgcaggagggtgcagcggcctgatggttcctgggaaggg
tcctggggagtgtgcttcacatatggaatctggtttggcctcgaggcctttgcgtgtatg
ggtcacgtctacggggacgaggacgtgtgtgtggaggtgcagaaggcctgtcagttcctg
ctggagtggcagatgcccgacggagggtggggggaggactttgagtcgtgcgagcagcgg
cgctacgtccagagcagcgcggctcagatccacaacacctgctgggctttgttaggcctc
atggccgccaggcatcctgacaggcgggccatagagagaggagtacagctgctgattgac
aagcagcttcctactggagactggccacaggaaaacattgcaggtgtgttcaacaagagc
tgtgccatcagctacacctcctacagaaacgtcttccctgtgtggaccctgggacgcttc
tcagcactttaccccggcagtccgctggctgggaaggtgaagctgtga
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