Hippoglossus stenolepis (Pacific halibut): 118119682
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Entry
118119682 CDS
T08308
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118119682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118119682
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118119682
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DMA
Motif
Other DBs
NCBI-GeneID:
118119682
NCBI-ProteinID:
XP_035029729
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All DBs
Position
2:complement(23201910..23211779)
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AA seq
315 aa
AA seq
DB search
MPLNVVLDGPAPWGFRLTGGKDFNQPLTISRITPGSKASVANLCAGDVILAIEGVAASDL
LHSEAQNKIKESSSQLCLTVERNESRLWTPRVMEEGRAHPYKINLEAEQQEFKPIGTGHN
RKAQPFVAAANIDEKRQVVSTAYNTPIGLYSSGNIQDAMEGQIRGIFPTKPESPRTLSSI
EESDVYRMLQQDQEDPQEPRQSGSFRALQDFIDSDGTRPIVTRTVKAPMNKPTPPTGNLQ
KLPVCDKCGNGIVGTVVKARDKYRHPGCFVCSDCDVNLKQKGYFFVEGQLYCEAHARARM
RPPEGHDLVTTYPSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaacgttgtgctggacggtccggcaccctgggggtttcgcctgacggggggg
aaggacttcaaccagcccctgaccatctccaggatcaccccgggcagcaaagcctccgtc
gccaacttgtgcgccggcgacgtcatcctggccatcgagggagtcgccgcctcggacctg
ctgcactctgaagcccagaacaagattaaagagtccagcagtcaactctgtctcactgtg
gaaaggaatgaatccagactgtggacgcctcgtgtcatggaggagggccgagctcatccg
tataaaatcaacctcgaagcagagcagcaggagttcaaaccgatcggcaccggtcacaac
cggaaagctcagccgtttgtcgcggcggcaaacatcgatgagaagcgccaggtggtcagt
acggcctacaacacccccataggcctttactcctcgggtaacatccaggacgccatggag
ggtcagatccgagggatcttccccacgaagcctgagagtcccaggactctgagcagcatc
gaggagtctgacgtttaccggatgttgcagcaggaccaggaggatcctcaggagccccga
cagtctggctccttccgagcgctgcaggattttattgacagtgatggcacccgtcccatt
gtgaccaggacagtaaaagccccgatgaacaaaccgacgccacccacaggaaacctgcag
aaactgcccgtctgcgacaagtgtgggaatgggatcgtggggacggtggtgaaagctcgg
gacaaatatcgccaccccggttgctttgtgtgctccgactgtgacgtcaacctcaagcag
aagggctacttcttcgtggaggggcagctgtactgtgaggcccacgctcgggccagaatg
agaccaccagagggacacgacctcgtcacgacttatccgtctgcgtag
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