Hippoglossus stenolepis (Pacific halibut): 118119696
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Entry
118119696 CDS
T08308
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118119696 (trappc10)
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
118119696 (trappc10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_2
TPR_12
SNAP
TPR_14
TPR_1
Gryzun-like
TPR_7
TPR_19
TPR_8
TPR_10
Motif
Other DBs
NCBI-GeneID:
118119696
NCBI-ProteinID:
XP_035029754
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Position
13:complement(19572597..19591052)
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AA seq
1259 aa
AA seq
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MESQEEKPIIYTMENKPIVTCAGDQGLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEVYKGTVKEDVMRWQNSLRGHGSVD
WVIIVVETNDTKKKNKTNILPRASIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVGNWSGLLLRRPIDMEKRDGIQRGEA
SLLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVLEGALDCWVFLS
CLEVLHRIEGCCDQVQLASNCSHTVGLWAYATDKLKSLGEHCGLVSEEGPTSEDLNRTVD
LLAGLGDERPETVNSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAIGRLRSARLV
GKSLAEFYMRKGDPEKAENFLQEALKSYVSEGWNLPVTHTRKQIAACQKLLGRTEDYLQT
SALLAGDANLTTEERKHFCQEILTFAAKSGDSSQNVTLSMGVFAHLTRLQFHPATASVHS
GAVLQVELTLRCLMPVSVHIQQVAASIHFDLDHGRLKALQRQTNPGTVEFNQGSSSAGPP
SSSASGPALELDEIHDRSPSDNSLNSTGVVCKNTHLIMRRHDSSSPPDTPNCVSPAVPMK
EGAQMLKVQDVMLEPGNNRITFTAPSGQPGTYTLRQLCATVGQVQFVLPHIYPSVQYEVY
SQEPQLTVEPLSEPLLAGLPQMVKFTLLTGHYTVKKGDALQLSNTDTMPILPSSSCSARI
SNPAAELLSESVLSIQSSEKVTSISLPPTPPYHTLEFQLEVLCLIPSGYDRPANERLTNG
EVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHSLLSAGNRKYIQ
VCVQNVSDVNFTLAEVKLTEKQHESLELQSLTTKAQQLLCSKHSVFCLWEVRWKDDLPSC
LQCVFSANFSLTNQDVSSLKPFHYQFQLERVTTLYSVRAEILPPAGEQHCRSGLLCGLEV
CITRLTEPAEGENAEESKTDTDGLKTTKLMYEVADSSSNWAVCGKSSGMVSMPMTANATH
KVQIEVMPLFAGHLPFPKIKVLKYLPHTAAVAIQPDPDSCVENDSLSLLDKTLDDQGDTA
SIRSRGSVHSVGSADQQQKGVAMPRLEPFGPGQAFNHSHARQVLVLPSSDDHIMEVNAT
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcaagaggaaaaacccatcatctatactatggaaaacaagccgatcgtgaca
tgtgctggagaccagggcttgtttacgtcgctctacacgtcattggcccaacaacttcct
agggagccaatggaatggaggaggacgtatggccgtgcaccaaaaatgatccaccttgaa
gctaattttgtccaatttaaagaggagctcctccccaaggagggcaacaaggctctcctc
accttccccttcctccacatctactggaccgactgctgtgatacggaggtatataagggc
acagtgaaggaggacgtgatgcgctggcagaacagcttgcggggccacggctcagtagac
tgggtcatcatcgtcgtggagaccaacgatactaagaagaagaacaagaccaacatcctg
cctcgcgcttccattgtggacaagatccgaagtgatttttgcaacaaacagaacgacagg
tgcgtggtgctatcggatcctctgaaagactcgtctcgctctcaggaatcctggaattcc
ttattactcaagctgcgaactctcctcctgatgtccttcaccaagaacctgggtcgattt
gaagacgacatgcggacgctccgagaaaaacgcacccagcccggctggagcttctgtgaa
tacttcatggtccaggaagagcttgcctttgttttcgagatgctgcagcagtttgaagat
gccttggtccagtatgatgaacttgatgctctttttacccagtatgtcctgaactttgga
gctggagatacagctaactggctcggctcgttctgcgccccggtgggcaactggagcggc
ttgctgcttcggcggcccattgacatggagaagagggatgggatccagcgaggggaggcc
agcctgttggatctgaggagctaccttttctcccgccagtgcaccttactcatcttcctc
cagaggccctgggaggtcacccaaagagcactggaactgctgcacaactgtgtccaggag
ctacgcctgctcgaggtgtcggtgctggagggggcactggactgctgggtgttcctcagc
tgcttggaggttttgcacaggatcgagggttgttgtgatcaggtccagttagcatcaaac
tgctcccatactgtcgggctgtgggcttatgcaactgacaagctgaagtctctgggggaa
cactgtggcctggtgtcagaggagggacccacatctgaggacctgaacaggactgtagat
ctgctggctggactgggagatgagagacctgagactgtcaacagtttgcagagcccgtac
aaaaagctaaaagaggctttgtcatctgtggaggcctttgaaagacactatcttgaactc
tcccatgcagctatggagatgtacagggccattgggcggctacggtctgccagactggtg
gggaaaagcctggcggagttttacatgaggaagggggaccctgagaaagcagaaaacttc
ttacaggaagctctgaagtcgtatgtatcagaggggtggaacctccctgtcactcacacc
agaaaacagatcgcggcgtgtcagaaactgctgggcagaactgaagactacctgcagact
agtgccttgttggcgggtgacgcaaatctgaccacagaggagaggaaacacttttgtcag
gaaattctgacctttgctgccaagtctggcgattcctcccaaaatgttactctcagcatg
ggcgtgtttgctcacctcacacggctccagttccacccagcgactgcgtctgtgcactct
ggagccgtcctgcaggtggagctcactctgagatgtttgatgcccgtgtccgtgcacata
caacaagtagctgctagcattcactttgacttggatcacggaaggttgaaggctttgcag
agacaaacaaacccagggacagtagagtttaaccaaggcagctcgtcagcaggccccccc
tcctcctcggcctcgggtcctgctttagaactggatgaaattcacgacagaagtccgtca
gacaattccctcaattctacaggagtggtgtgtaaaaacactcacctgatcatgcgtcgt
catgacagcagctcgccaccagacacgcccaactgtgtcagtcctgctgttcccatgaag
gaaggagcgcagatgctgaaagtgcaggatgtaatgttagaacctgggaataacagaatt
accttcacagcaccaagtgggcagcctgggacttacacattgcgtcagctgtgtgccaca
gtgggtcaggtgcagtttgtgctgcctcacatctacccatcagtccagtatgaagtgtat
tctcaggagccacagctcactgtggagccgctctcagagccgctgttagccggtctgcct
cagatggtgaagttcactctgttgacgggtcactacactgtgaagaaaggagacgctctg
cagctcagcaacacagacaccatgcccatcctgccctccagcagctgctccgcccgcatc
agcaaccctgcggctgagttgctgagtgaaagcgtcctctccatccagtcgtctgagaag
gtgaccagcatcagcctgcccccgacccctccctaccacaccctggagttccagctggag
gtcctgtgcctcatcccgtccgggtacgaccggcccgccaacgagaggctgaccaatggg
gaggtccgccatcgaccacgcagctacagtcatcctgacacgcccatgaccgccatcgac
cagaggatgtctatcgactgtccctggtcgatttactccacgctgctcgccctcaccttc
tacatccccttcaagaccaaacactcactgctttctgctggaaacaggaagtacatccag
gtgtgtgtgcagaatgtgtcagacgtgaacttcacgctggcagaagtgaagctgacagag
aagcagcatgagtcactggagctacagtccctgaccactaaagcacaacagcttttgtgc
agtaagcacagtgtgttctgcttgtgggaggtgaggtggaaggatgacctgccttcctgt
ctccagtgtgttttctctgccaacttctctttaaccaaccaggacgtctcctccctcaaa
cctttccattaccagtttcagctcgagagagtcactacgttgtacagtgtgagagctgag
atcctgccccctgctggtgaacagcactgtcgttctggcctcctctgtggactggaggtg
tgtataacacgactgactgaacctgcagagggggagaatgcagaggagagcaagacagac
actgatggactcaaaaccaccaaactcatgtatgaagtggctgacagcagcagtaactgg
gcagtgtgtgggaagagttcagggatggtgtcgatgcccatgacggccaatgccacccac
aaggtgcagatcgaggtgatgcctctgttcgcaggacatctgcccttccccaaaatcaaa
gtactgaagtacctgccccacactgcagctgtggccattcagccagaccctgacagctgc
gtggagaatgacagtctgtccctgctggacaagacgctggacgaccagggggacacagcg
agcatccggagccggggcagcgtccattctgtgggcagtgccgaccagcagcagaaaggc
gtggccatgccacggctggagcccttcggccccggacaggcgttcaaccacagccacgca
cggcaggtcctggtgctgccctccagcgacgaccacatcatggaggtcaacgccacatga
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