Hippoglossus stenolepis (Pacific halibut): 118119732
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Entry
118119732 CDS
T08308
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118119732 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118119732 (hdac4)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118119732 (hdac4)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118119732 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
118119732
NCBI-ProteinID:
XP_035029815
LinkDB
All DBs
Position
13:5318179..5433202
Genome browser
AA seq
1108 aa
AA seq
DB search
MSSHSQPGVFSNKDQPLELLNPLALNHFVDVSTAALPTQVPPATTALLPMDLRVVDHHHH
HHQQPPFGLVPQTHPLQPVSTACPLLAEPGRGQVVSHPEQQLQQELVVLKHKQQLQRQLL
IAEFQRQHEQLSRQHEVQLQEHIKHQQDLLALKHQQELLDHQRKMEEQRHKQQMEKQQRE
HKLQQLKNKDRGQESAIASTEVKMRLQEFVLNKKKALAQRNLNHCLPSDPRYWYGKTQHS
SLDQSSPPQTALSAYNHPLLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLR
RKDGLITTAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPSENGVIISSCPGEASLLQRL
AAREGSLSKLSLYTSPSLPNITLGLPATCLTNTVVSGHQDGESHLSALQQGIPLTPPFLA
TAHLPPYLASSALDREGVGGGTAGHNPLLQHMVLLEQSHNPVVGLGGLSLQSPAVSKLAR
GHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQLFQQQQQHIINKIISKPG
DQVSSACSIASGSARQHQSHPEETEEELREHQGLSSLSSASMQETGLLRGMVIKQEPLDL
QEQEEIEQRERLAEQDFLFRQQQALLLEQQRIHQLRNYQASMEAAGLSISFAGHRPLSRA
QSSPASSSFPMAVQEPTAKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHAGRIQSIWSRLQ
ETGLRGHCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCSVSPMFVRLPCGGIGV
DNDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFN
SVAIAAKLLQQRLNVSKVLIVDWDVHHGNGTQQAFYSDPSILYLSLHRYDDGNFFPGSGA
PDEVGAEAGVGFNVNMAFTGGLEPPMGDADYLAAFRTVVLPIANEFAPDVVLVSSGFDAV
DGHAPPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNE
LDPIPDEVMQQRPNANAVQSMEKVIEVQSKYWRSLQRSASTLGCSLSEVLQRDAEEAETV
SAMASLSVANKHIGKRAEEEPMEEEVPM
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacagtcaaccaggcgtcttcagcaacaaggatcagcctctggaacttctc
aatccacttgcactcaaccatttcgtggatgtgagcactgcagcgctgcccacgcaggtg
ccccctgccaccacagctctccttcccatggacctgcgcgtagtggaccaccatcaccac
caccaccagcagcctcccttcggcctggttccccaaacccaccccctacaacctgtctcc
acagcctgtcccttattagccgagccaggccgtgggcaagtcgtcagccacccggagcag
cagctgcaacaggagctcgtggtgctcaaacacaagcagcaactgcagagacagctactg
atcgccgagttccagaggcagcatgaacagctgtcgcgacaacatgaagtccagctgcag
gaacacatcaagcaccaacaggatctactggccctcaaacaccaacaggagctgttggat
catcagaggaagatggaggagcagcgtcacaagcagcaaatggagaagcagcagcgcgaa
cacaaactccaacagctcaaaaacaaggatcggggacaagagagtgccatcgccagtaca
gaggtaaagatgcgacttcaggagtttgtcctgaacaagaagaaagccctggctcagcga
aatctaaaccactgtctgcccagtgacccacgctactggtatggaaaaacccagcacagc
tctttggaccagagctctcctccccaaacagcattgtcagcgtacaaccacccattgctg
ggcacatatgactcaaaagatgacttccctctccgtaaaacagcttccgagcccaacctg
aagcttcgttccaggctaaagcagaaggtgacagagcgccgcagcagccctctcctccgc
aggaaagatggtctaatcactactgccaagaagcgttccctagatgtggccgagtctgca
tgcaacagtgcaccaggctctggtcccagctcccccaacaacagctccagtaacatcccc
agtgagaatggggtcatcatctccagctgcccaggagaggcctccctgcttcagagattg
gcagcgagggaagggtctctcagcaagctgtctttatacacctctccgtctctgcccaac
atcaccctgggactgccagccacatgcctcactaacactgtggtatcaggacaccaagat
ggtgagagtcatctctctgcgttacagcagggcattcctctgacccctcctttcctggcc
actgcccacctacccccctacttggcatcttcagcgctggacagggagggggtcggaggg
ggcacagctggtcacaaccccctcctccaacacatggtgctgctggagcagagccataat
ccagtggttggtcttggtggtctttcgctgcagtctcccgctgtctccaagcttgcgcgg
ggccaccgtcccctggggaggacccagtcagccccactgccccagcagcagtgtggacag
gcccaggccctgcagcagctggtggtccaacagcagcaccagcagttcctggagaaacac
aagcaactgttccaacagcagcagcagcacatcatcaacaagataatttcgaagcccggc
gatcaggtctcctcggcatgctccatcgcctcagggtcggccaggcagcatcagagtcac
ccggaggagacggaggaggaactccgggagcaccaggggctgtcctccttgtcctctgcc
tccatgcaggagacagggctgctccgggggatggtcatcaagcaggagcccctggacctc
caggagcaggaggagattgagcagagggagagactggctgagcaggacttcttgttcaga
cagcagcaggctctgctgttagagcaacagcggatccaccagttgaggaactaccaggcc
tccatggaagcagccgggttatcaatcagcttcgcgggacaccgcccgctctccagggcg
cagtcgtctccagcctcctcctccttcccgatggccgtacaggagcccaccgccaagcct
cgattcactacaggtctggtatacgactctctaatgcagaagcaccagtgtatgtgtgga
aacaccaccagtcatccagagcacgccggacgtatccagagtatctggtcccgactacag
gaaacaggcctcagagggcactgtgagtgtatccgtggtaggaaggcctcactggaggag
ttacagacagtccactccgaagcccacgtcctgctctacggaaccaatccactgcggcaa
aaactggactgttcagtgagtcccatgtttgtgcggttaccatgtggcggcatcggggtg
gacaacgacaccatttggaacgaggtccattcgtccagtgcagctcgtctggctgttggc
tccgtcgtggagctggtcttcaaagtggcatcgggcgaactgaagaatggttttgctgtc
gtgcgtccacctggacaccatgctgaggagagcacgcccatgggcttctgttacttcaac
tcagttgccattgcagccaagctcctgcagcagaggctgaatgtcagtaaagtcctcatt
gtggactgggatgttcaccatgggaacggcacccagcaggccttctacagtgaccccagc
atcctttacctttcattgcatcgctacgacgacggaaacttcttccctggcagcggtgca
cctgatgaggtgggcgctgaagcaggtgtaggcttcaatgtgaacatggcctttactggg
ggactggaacctcccatgggggatgcagactatctagctgccttcaggacggtggttctg
cccattgccaatgagtttgccccagacgtggttctggtatcttcaggctttgatgcggtg
gacggacacgctccgcccctgggaggatacaaactgacggccaaatgctttggctacctg
accaggcagctgatgggtctggcaggcggtcggttggtgcttgccctggaggggggtcac
gacctcacagccatatgtgatgcctccgaagcctgcgtctctgctctgcttggcaatgag
ttggaccccattccagatgaggtgatgcagcagagaccaaatgccaacgctgtccagtcc
atggagaaggttattgaagttcaaagtaaatactggcgctcactgcaacgctccgcctcc
acacttggttgttcattgagcgaagtcctccagcgtgacgcagaggaagccgagaccgtc
tccgccatggcctcgttgtctgttgccaacaaacatattggaaagagggctgaagaggaa
ccgatggaggaggaggttcctatgtaa
DBGET
integrated database retrieval system
