Hippoglossus stenolepis (Pacific halibut): 118119783
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Entry
118119783 CDS
T08308
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118119783 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118119783 (herc3)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118119783 (herc3)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
HECT type E3
118119783 (herc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
EKLF_TAD1
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
118119783
NCBI-ProteinID:
XP_035029968
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All DBs
Position
2:20867572..20886366
Genome browser
AA seq
1048 aa
AA seq
DB search
MLCWGNAKDGQLGIGLERNPLFEPKNCHVFIGRGLKEVSCGGQYSMFLLYDGSVYTCGSN
SCGQLGHDKPGTSPELVGALDTQKITNVSSGRAHSMAVNEKGQVFAWGAGEGGQLGLGTA
EVAVRIPRLVKRLCDHHISQVMCGNQHCIALSRDGQLFTWGQNASGQLGLGKGEPSKLFP
HPLMSLAGIPLAQIIAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSSNNELLPRRVLELMGTEVSQITC
GRQHTLAFVPSSGLVYAFGCNSHGQLGTGILGDGRSPFPVKTNLLTGHFHRAESRHYIVT
KIICGGDHSFLLYSNEQSSVPPEDFRVINISKSLTPINYERLNSWRLKLMYNTDSSVTND
IIIQLSSTACWNASFLDQSDDIHFKTNPKIPGIDLNSVRLLFEALSKPAFSGLLEQATKS
FESLLIPQLPHSPPDVEAMRIYLILSECPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFVDDSVFTRMVDIYKSIVVFMLTGGKTLLVPMFYENYFLAALRLLEKLHKVNLKAQ
HVEYNRFYIPDVTSLVDIQEDYLKWFLSKAEIKMGSSPSQSDFPSVNLCAYPFILNAQAK
TTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVIHVRRDHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTPYKESNLLWFSDKCF
VEENWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSPLLEDFKELSPTEARSLQQLL
DYEGGDVEETFLLNFAITRENYGMTEVKELIPGGESISVDKNNRKEFVEAYLRYVFSDSV
SEQYSAFSSGFLKVCGGEILALFQPSELMAMVVGNNNYNWEEMEKNAAYKGEYTATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIIIQSTMAEEHYLPVAHTCYNLL
DMPRYHTKEILCRRLTQAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaacgcaaaggatggacagctgggcattggcctggagaggaacccc
ttgtttgagccaaagaactgtcatgtgttcattggccggggactgaaggaggtctcgtgt
ggaggacaatactcaatgttcctgctgtatgatggcagcgtgtacacatgtggctctaac
agctgtggacagctgggccacgacaagccagggacttccccagagctagttggagctctg
gatactcagaagataacaaatgtgtcgagtggtcgagcccattctatggcggtgaatgag
aagggtcaagtttttgcctggggagctggtgaagggggtcagctcggcctggggactgca
gaggtggctgttcgcatcccaaggttggtcaaaagactgtgtgaccatcacatctcccaa
gtaatgtgtggaaatcagcactgcatcgcactttctcgagatggccagctattcacgtgg
ggccagaacgccagcggtcagctcggcctgggaaaaggagaacccagcaaactgttccct
catcccctgatgtctctggctggaatccctctggcacagatcatcgctgggggagaccac
agcttcgctctctccttgtccggagctgtgtttggctggggcaaaaacagagcgggacaa
ctgggtctcaatgataaacaagatcgtgccgtcccctgccacatcaaatttttgagatct
caaaaagttgtttacatcagttgtggagatgaacatacagcagcactcacaaaggacggt
ggcttgtttacgtttggcgatggctcgtggggtcagctgggtcacggctccagcaacaat
gaacttttacccagacgagtgctggagctcatgggcactgaggtgtcccagatcacctgt
ggcaggcagcacacattggcgtttgtgccgtcctctggactggtgtatgcattcggttgt
aacagccatgggcagcttggcacaggaatactgggagatggtagaagtccatttcctgtg
aagaccaatttgttgactggtcatttccatagagcagaatcaagacactatatagtgacc
aaaatcatctgtggaggagaccatagtttcttattgtactccaatgaacagagctccgtc
cccccagaagacttcagggtgatcaacatcagtaaaagcctgaccccaatcaattatgaa
cggctaaattcatggaggttaaaactgatgtacaacacagattccagtgtcaccaacgac
attattattcaactctcctccacggcttgttggaacgccagcttcttggaccaaagtgat
gacatccacttcaaaaccaacccaaagatcccgggcatcgatctcaactcggtcagactt
ctgtttgaggctctcagcaaaccggccttctctgggcttctggagcaggccaccaagagt
tttgagagtctgctgatccctcagctgccgcactctcctccggacgtagaggccatgagg
atctacctcatcttgtctgagtgtccagcgctgcaggactccaagaactacatccgcctc
actatccccttggcaatggccatcctccggctcgacgccaaccccagcaaagtattggac
aactggtggtgttttgtggacgacagcgtgttcaccagaatggtcgacatttacaagagc
atcgtcgtgttcatgctgacgggaggaaagacgctgctcgtgcccatgttctacgagaac
tattttcttgcagcgctaaggctgctggaaaaactccacaaggtgaacttaaaggcccag
catgtggagtacaaccgcttttatatccccgacgtcaccagcctggtggacatccaggaa
gactacctcaagtggtttctgagtaaagctgagattaaaatgggatcatccccttcgcag
agtgactttccctcagtgaacctttgtgcctacccgttcatactgaatgcccaagccaag
acaaccatgctgcaaacagatgctgaactgcagatgcagatggcagtaagcggtgcaaac
ctacacaacgtcttcatgctgctcacgctggaaccccacctcgcccgaaatccttacctg
gtgatacacgtgcgcagggaccatttagttagcgacaccctgcgggagctcaccatgtac
tctgacgtggacctgaagaagccacttaaggtgatcttcgatggagaggaggccgtggac
gcaggcggagtaactaaggagttcttcctgctgctgttaaaggagctgatggatcctgtt
tatgggatgttcactccctacaaagagtccaacctgctgtggttctcagacaaatgtttc
gtagaagagaactggtttcatctgatcgggatcatctgcggtctggccatctacaactcc
actgtggtggacctgcacttccccctggctctctacaagaagctgctggacgtgtcgccg
ctgctcgaggacttcaaggagctctccccaaccgaggccaggagtctacaacaacttcta
gactatgagggaggtgacgtagaggagacgtttcttctcaactttgctatcaccagggag
aactacggcatgacagaggtgaaggagctgatccctggaggagagagcatcagcgtggac
aaaaacaacaggaaggagttcgtggaggcctacctgcgctacgtgttctcggactcggtg
agcgagcagtactccgccttctcctcaggtttcctgaaagtgtgtggaggcgagatcctg
gcgctgttccagccgtcggagctgatggccatggtggtcggcaacaacaactacaactgg
gaggaaatggagaagaatgctgcttacaaaggggaatacacagccactcatccaactgtc
agattgttctgggaggttttccacgagttccctctggagaagaagaagcagttcttgttg
ttcctgaccggcagcgaccgcatccccatccacggcatggagagcctgcgcatcatcatc
cagtccaccatggccgaggagcactacctgccggtggcccacacctgctacaacctgctg
gacatgccccgctaccacaccaaagagatcctgtgccgccgtctcactcaggccgtggag
cagtacgagggcttcagcctggtgtga
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