Hippoglossus stenolepis (Pacific halibut): 118119841
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Entry
118119841 CDS
T08308
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118119841 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118119841 (cnot9)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118119841 (cnot9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
118119841
NCBI-ProteinID:
XP_035030088
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All DBs
Position
13:3590612..3594752
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AA seq
299 aa
AA seq
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MLATGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSC
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNLRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDARGIPLAPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgaccggagcggctgtgactaatgtgacagctctggcccaggtggaccgggag
aagatctaccagtggatcaatgagctgtccagtccggagaccagggagaacgcgttgctg
gagctgagcaagaaacgggaatccgtgccggacctggcgcccatgctgtggcactcctgt
ggcaccattgctgccctgctgcaggagatcgtgaacatctatccatctataaatccaccc
acactgacggctcaccagtcgaaccgagtgtgcaatgccctggcacttctgcagtgtgtc
gcctcgcacccggaaacacggtcggcgttcctcgctgctcacattcctcttttcctttac
cccttcctgcacactgtgagcaaaacacggccatttgagtacctgcgactcaccagcctc
ggcgtcatcggtgctttggtcaaaacggatgaacaagaagtgataaacttcctcctcacc
actgaaatcatcccgctgtgtctccgtattatggaatctggcagtgaactatccaagacg
gttgcaactttcatacttcagaagatcctcttggatgacacagggctggcctacatatgt
cagacttatgaacgtttttcccatgtggctatgatcctgggcaaaatggtgttgcagctc
tcgaaagaaccatcagcacgtctgctgaagcacgttgttcgctgctaccttcgcctctca
gataatctcagagccagagaagccctgcgtcagtgtttgcccgaccagctgaaagacagc
acctttgctcaggtgctgaaggacgacaccaccaccaagcgctggctcgcacaactggtc
aagaacctgcaggaaggtcaagtcactgatgccagaggcatcccgctggctccacagtga
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