Hippoglossus stenolepis (Pacific halibut): 118119893
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Entry
118119893 CDS
T08308
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A isoform X1
KO
K10523
speckle-type POZ protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118119893 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118119893 (spopla)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
118119893 (spopla)
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Gene cluster
GFIT
Motif
Pfam:
BTB
MATH_2
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
118119893
NCBI-ProteinID:
XP_035030206
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Position
13:complement(7612083..7626438)
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AA seq
399 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKCGVSLFSRCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREE
TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQ
SNMNMLKVPECQLSDDLGNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEM
EESKKNRVDISDVDPDVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEAL
CNSLSVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMET
AGWKSMIQSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcccacccctcctcctcctggggagatgtcaagtggacctgtggcagaa
agctggtgttacacacaggtcaaagttgtgaagttttcctacatgtggaccataaacaac
tttagtttttgcagagaagaaatgggcgaagtcttgaagagctcaaccttctcttctggt
cctaatgacaaaatgaaatgtggcgtctctttattttccaggtgtctgcgagtcaaccca
aagggacttgatgatgaaagcaaagactatctgtcactgtatttacttcttgttagttgt
ccaaaaagtgaagtcagagcaaagttcaagttttctttgttgaacgctaaaagagaggag
acaaaagcaatggaaagccaaagagcatacagatttgtccaaggtaaagactggggcttc
aaaaaatttataaggagagatttcctcctggatgaagccaatggactcttaccagatgac
aagctcaccctcttctgtgaggtcagcgttgtccaggactctgttaacatttcgggccag
tccaacatgaacatgctgaaggtaccggagtgccagctgtcagacgacctagggaatcta
tgggagtgttcgcgcttcacagactgcagcctttatgtgggagggcaggagttcaaagcc
cacaaatccatcctcgcagcgaggtctcctgtctttaatgctatgtttgaacatgaaatg
gaagaaagtaaaaagaaccgtgttgacatcagtgacgtggatccggatgtctttaaggaa
atgatgggcttcatctatacaggaaaggccccaaacctggagaagatggcagacaatttg
ctggcagctgcagataaatacgctttggagcgtttaaaggtcatgtgcgaagaggccttg
tgcaacagcctttcagtggagaatgtggccgacaccctcatcctagcagacttgcacagt
gccgagcagctcaaagcacaagccatagattttatcaacaggtgcagtgtcctgagacag
ctgggctgtaaagatggaaagaactggaatagcaatcatgctacagatataatggagact
gcaggctggaagtcaatgatccagtcccatcctcacttggttgcagaggcctttcgcgcc
ctggcttcagcacagtgcccaccctttggtcttcccaggaagcgtctaaaacagtcctga
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