Hippoglossus stenolepis (Pacific halibut): 118119898
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Entry
118119898 CDS
T08308
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118119898
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118119898
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118119898
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118119898
NCBI-ProteinID:
XP_035030246
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Position
2:13498143..13503491
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGMAIKKDEDVLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNEVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacgacgttgataatgaacttctggactatgaggaggatgaggagccacag
ggagcccctgagagtgggaccccagcgaacaagaaggaggtgaaggggtcctacgtatcc
atccacagctccggcttcagagacttcctcctcaaaccagagctgctccgtgccattgtt
gactgtggttttgagcatccttcagaagtccaacatgagtgtattcctcaagctatcctg
ggcatggacatcctgtgtcaggcaaagtctggtatgggaaagacagctgtgtttgtactt
gccaccctgcagcagatcgagcctgtggacggtcaggtgtctgtccttgtcatgtgccac
acgcgagagttggccttccagatcagcaaagagtacgagcgcttctccaagtacatgccc
actgtcaaggtgtcggtgttcttcggtggcatggccatcaagaaggacgaggatgtcctg
aagaagaattgccctcacattgtcgtgggaactccaggacgtaccctggccctcatccgc
aacaaaaccctcagtgtgaagaacatcaaacactttgtgctcgacgagtgtgataagatg
ctggagcagctcgacatgaggcgtgacgtccaggaaatcttcaggctgacaccccatgag
aagcaagtaatgatgttcagtgcaacattgagcaaggagatccgccccgtttgccgcaag
ttcatgcaggatcccatggaagtgtttgtggacgatgagaccaagctgacactgcatggc
ttacagcagtattactgcaagttgaaggacagtgagaagaaccgaaagctgtttgacctg
ctcgatgtgctcgagttcaaccaggtggtgatctttgtgaagtcagttcatcgctgtgtg
gctctgtctcagctgctggtggagcagaacttcccggctattgccatccacaggggcatg
gcacaggaggagaggttatcccggtatcagcagtttaaagacttccagcggcggatcttg
gttgcaaccaacttgtttggccgaggcatggacattgagcgagtcaacatcgtcttcaac
tacgacatgccagaagattccgacacttaccttcacagagtggcccgtgctggaaggttt
gggacaaaaggtctggccgtcacttttgtgtcagatgagacagacgccaagaccctgaat
gaggtccaagaccgctttgaggtcaatgtggcagagctaccagaggagattgatatttcc
tcttacattgaacagtccagatga
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