Hippoglossus stenolepis (Pacific halibut): 118119904
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Entry
118119904 CDS
T08308
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04110
Cell cycle
hsp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118119904 (smc3)
04114 Oocyte meiosis
118119904 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118119904 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118119904 (smc3)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118119904 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
118119904 (smc3)
Proteoglycans [BR:
hsp00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
118119904 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118119904
NCBI-ProteinID:
XP_035030274
LinkDB
All DBs
Position
2:11170133..11198260
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIK
QRTKLELKTKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETSKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKSILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSTTFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSEDLDVLVDKTEVEIKDHIKS
MERWKNIEKDQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELERGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGGDSERG
SGSHSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttccgaagttacagggaccaaactgtggtg
gaccccttcagtccaaagcacaacgtcatcgttggaaggaatggatcaggaaaaagtaac
ttcttctacgccattcagtttgtgctcagtgatgagttcagccacctacgacctgagcag
cgtctggccctgctccatgagggaactggtccacgtgtcatttctgcttttgtggagatt
atatttgacaactctgacaaccggctgccgattgacaaggaggaagtctcccttcgccgt
gtcattggcgccaagaaggaccaatacttcttagacaagaagatggtgactaagaatgat
gtcatgaaccttctggagagtgctggtttctcccgcagtaacccctactacatcgtcaag
cagggaaagatcaaccaaatggccacggcaccggattcccagcgtttaaagctgctgcga
gaggtggcagggacacgggtgtacgatgagcgcaaggaggagagtatttctctcatgaag
gagacagagggtaaacgagagaagatcaatgaactgctgaagtacatcgaggagcgtctg
cacaccctggaggacgagaaggaggagctggctcagtaccagaagtgggacaagatgaga
agggccctggagtacaccatctacaaccaggaactgaatgaaacccgcgccaaactggat
gagttgtcctccaagagggagacctgtggagacaaatcccgacagctgcgtgatgctcag
caagatgctagagacaaagtagaggagacggagcgtgttgtgagggagctgaagtccaag
atctctgccatgaaggaggagagagagcagctgtcggccgaacgccaggagcagatcaag
cagaggaccaaactcgagctgaagaccaaggacctgcaggacgagctggcaggcaacagc
gaacagaggaaacgcctgctaaaggagcgtcagaagctgctggagaaaattgaggaaaag
caaaaagagctgcaggagacggagccaaaattcaacatggtgaaggaaaaagaagagcgg
ggtatctccagactggctcaggctactcaggagaggacagacctctatgccaagcaggga
cgtggcagccagttcacctccaaggaggagagggacaagtggatcaagaaggagctgaag
tcgctggaccaggccataaatgataaaaagaggcagattgcagcgattcacaaagacctg
gaagacacagagactagtaaggagaagaacctggagcaatacaataaactcgatcaagat
ctgaatgaggtgaagacccgtgtggaggagctggacaaaaagtattatgaggtgaagaac
aggaaagatgaactgcagagtgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggccctggcagccaaacgcgaggatctggagaagaaacagcagctccttcgagcggcc
accggcaagtccattctgaacggcattgacagcatcaacaaagtccttgagcatttccgt
cggaaaggcatcaaccagcatgtcatcaatggttaccacggcatagtcatgaataacttt
gagtgtgagcctgctttctatacctgtgtggaggtgaccgctggtaccagattgttctac
cacattgtggagactgatgaagtcagcaccaaaattctgatggagttcaacaaaatgaac
ctgccaggagaagtcacattcctgcccttgaccaagctggacgtcagggacacagcttat
ccagagaccaatgatgccattcccatgatcagcaaactgcgctatagcaccacctttgac
aaggccttcaagcatgtgtttgggaagaccctgatttgtcgcagcatggaggtttccacc
cagctggccagggcgttcaccatggactgtattactctggagggtgaccaggttagccac
cgtggagcgctgacaggaggctactacgacaccagaaagtctcgtctggagctgcagaaa
gacatgaggaaggcggaggaggagttgggtgagctggaggccaagctcaatgagaacctg
cgcaggaacattgaacgcatcaacaacgagatcgaccagctgatgaaccagatgcagcag
attgaaacacaacagaggaagtttaaggcgtctagagacagtattctgtcagagatgaag
atgctgaaggagaagaggcagcagtcggagaaaacgttcatgcccaagcaacgcagtctc
caaagtctggaggccagtctccatgccatggagtccaccagggagtcactgaaggctgag
ctgggcacagatctgctttctcaactcagcctggaggaccagaggcgtgtcgatgacctc
aatgatgagatccgtcagctccagcaggacaacagacaattgttgaatgagaggatcaag
cttgagggcatcatgaccagagtggaaacatatctaaatgagaacttacggaaacgtctt
gaccaagtggagcaggaactgaatgagctgcgggagactgagggaggtacagtgctcaca
gccacaacatctgagctggacggcatcaacaaacgtgtcaaagacactttggcccgatca
gaagatctggatgtccttgttgacaagaccgaggtagagatcaaggaccacataaagagc
atggagcgctggaagaacatagagaaggatcagaatgatgccatcaaccatgacaccaag
gagctggagaaaatgaccaacagacaaggcatgctgctcaagaagaaagaggaatgcatg
aagaagatcagagagcttggttcacttcctcaagaggcctttgagaagtaccagaccctc
acactcaaacagttgttcagaaaactggagcagtgcaacacagagctgaaaaagtacagt
cacgtcaacaagaaagctctggaccagtttgtcaacttctctgagcagaaggaaaaactg
atcaagcgtcaagacgagctggaacgtggccacaaatccatcatggagctcatgaacgtc
ctggagctgcgaaagtacgaggccatccagctcaccttcaaacaggtgtcaaagaacttc
agtgaagttttccagaagctggtgccgggtggaaaagctacactggtgatgaagaagggc
gatgctgaaggcagccagtctcaggatgagggtgagggcggtggagacagcgagaggggc
tctggttcacacagcagcgttccatcagtggaccagttcaccggagtcggcatcagggtg
tcgttcacagggaagcagggtgagatgagagagatgcagcagctgtctggaggtcagaag
tctctggtggctctggctctgatatttgccatccagaagtgtgaccccgcccctttctac
ctgtttgacgagatcgaccaggccctcgacgcccagcacagaaaggctgtctcagacatg
atcgtggaactggccggccacgcccagttcatcaccaccactttcaggcctgagctgctc
gagtccgccgacaagttctacggtgtgaagttcagaaacaaggtgagtcacattgatgtg
atcacagcagagcaggccaaagactttgtggaggacgacaccacccatggttaa
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