Hippoglossus stenolepis (Pacific halibut): 118119919
Help
Entry
118119919 CDS
T08308
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118119919 (lcmt2)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
118119919 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
118119919 (lcmt2)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118119919 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_5
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_6
Kelch_2
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
118119919
NCBI-ProteinID:
XP_035030289
LinkDB
All DBs
Position
13:1925933..1932917
Genome browser
AA seq
674 aa
AA seq
DB search
MPTSSRQKKKKGGDVAVQGTNDSSVVSKASAAARGYFHDHFLQHFVCKEARRAPLINRGY
YVRWRAVDHCVRRFLHVTENCPKRQILSLGAGFDSLYFRLRADEALAGVVVFEVDFPDVA
GRKTALISSNITLRGMLDPHLPAPTGAVHVCSGQYRLLGLDVREESQVKEALEAAGLDWA
APTLILSEVVLTYMETQWSDVVISWAAKLLPQSLFVMYEQIHPHDPFGSIMQDHFHKLNS
TLHALRQYPDTAAQRRRFLDKGWDQCVCLDMNDFYLGLVPEDERRRVEDLEPFDEYEEWH
QKCSHYFILTASQGSCMTQALLTHPPVSPVSSVNPSLSPVALSVKLDPACVEGLGMASSS
VSPGWLLLTGGSGRGGRGAVSRVLLRGQEGWRSVTVEPSLDLGVRLYHTVTSCPGGGAVV
YGGRSSPLSPARGLFKVLLDPAGPPAPLDGVKLCVEEMLCTGDPPPPRWRHTAAIVSHKG
KDFLFVYGGKNESDAVLGDGHFLCLDQLLWTEIPVEGAAPEPLHSHSACSYQGGVVMFGG
LDRRGVPLGDTVVLRPTDRGFSWETIELQPPPVPRYSHSAHVIGQKLVVVGGVWMHSDGV
PGVVMIDLATRSSVEFSLDTTRVPWPLMLHSFCCELTDSEEPELLLIGGGGSCFSFGTHF
NPQPVTLNLRPVLG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgagcagcagacagaagaagaagaaggggggggacgtggcggtgcagggaacc
aacgacagcagcgtggtgagcaaggcatcggctgcagcgcggggctacttccacgaccac
ttcctccagcactttgtgtgcaaagaggccagaagagccccgctcatcaacaggggctac
tatgtgcgctggagagctgtggaccactgcgtgaggaggtttctacacgttactgaaaac
tgccccaagagacagattttgtcgttgggcgcaggtttcgactcgttgtattttcgcctg
cgggcggatgaagctctcgccggagtcgtggtgtttgaggtggatttccctgatgtcgct
ggacgtaaaactgctctcatctcctctaatattacactgagggggatgttagacccacat
ttacctgcacctacaggagctgtgcacgtatgcagtggtcagtatcgtctgttagggttg
gatgtcagagaggagtcccaggtgaaggaggctctggaggcagctgggttggactgggct
gctcccactctgattctgtctgaggtggttctcacctacatggaaacacaatggtcggat
gtcgtcatcagttgggcggcaaagctcctgcctcagtccctctttgtgatgtatgagcag
atccatccacatgatccctttggttcaatcatgcaagatcatttccacaaactgaattca
acgctgcacgcccttcgacaatacccagacaccgccgctcagagacgccggttcctggac
aagggctgggatcagtgtgtgtgtctggatatgaatgacttctacctggggctggttcct
gaggacgagaggcgcagggtggaggacctggagccttttgatgaatacgaggagtggcac
cagaaatgttcccactacttcatcctcactgcctctcagggctcttgtatgactcaggct
ttactcacacatcctccagtgtctccagtgtcgtctgtaaacccatctttgagccctgta
gccctgagtgtgaagcttgatcctgcttgtgtggagggtttggggatggcctccagctca
gtgagcccaggatggctcctgctaacaggaggctccggcagggggggcaggggggcagtg
agtcgagtcctcctccgagggcaggaagggtggagatccgtcactgtggagccgtcacta
gacttgggcgtgcgactgtaccacacggtcacgtcctgtccaggaggaggtgcggtggtg
tacggaggtcgctcctctcctctcagcccagccagaggccttttcaaagtgctgctggac
cctgctggtccccctgcccctctagacggagtgaaactgtgtgtggaggagatgctctgt
acaggggatccacctccgccaagatggaggcacactgccgccatcgtcagtcacaaaggc
aaagactttctgtttgtttacggtggaaagaatgaatccgacgctgttctgggtgacggc
cacttcctgtgtctggaccagctgctctggactgagatcccagtggagggagcggcacca
gagccactccactcccactccgcatgttcatatcagggaggtgtggtgatgttcggaggt
ctggaccgaaggggggttcctctgggggacacggtcgtcctcaggcccactgacagagga
ttctcctgggagacaatagagctgcagccccctccggtccccagatactctcattctgcc
cacgtgattggacagaagctagttgtggtgggcggggtctggatgcattccgatggcgta
ccgggtgttgtcatgatcgacctcgccacacggagcagcgtggagttcagcctggacaca
acccgggtgccgtggcctctgatgcttcactctttctgctgcgagctgacagactctgaa
gaaccagagctgctcctgattggtggaggaggaagctgcttctcctttgggactcatttc
aacccccagccggtcactctgaacctcaggcctgtcctgggatga
DBGET
integrated database retrieval system
