Hippoglossus stenolepis (Pacific halibut): 118119997
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Entry
118119997 CDS
T08308
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118119997 (aff3)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118119997 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
Motif
Other DBs
NCBI-GeneID:
118119997
NCBI-ProteinID:
XP_035030428
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All DBs
Position
13:complement(16791717..16809003)
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AA seq
1223 aa
AA seq
DB search
MPTVLGGREKLSIVCFLLRCAYSQVTGSQHNSCAKDILEDMTQSWPSQQALGGDQARQIL
YNPKDVKQSTTQQRQSRGDVQQRLTRHPHVAPHKSMLADDLKLSSDDDDTQRATHESAPW
DRHSLSAQRAHTHGRRVRHSSSDSSGSDSTVGSGSSSPRSRSPSPDVHPDPASPANVQPP
CNSKETDHPAAAQWQLDKWLKKSHKKSDSSEQDPSRSARRRLPSPHTERAPSPARSWDSN
QEYSPSQSPIPSPQFNYSHNNTPLPSPGYSYGPSPSPFTSTCPSPSPRLSSILSPALSVC
LSPCGSPRGSRSPSPLPTHPPRSPSPSLPSPSRHRHYPEIQTQTVQTTNPHRTKARSWIP
PLPNTKNKPTNGSHPQATHQHRPRTRPTHDQEPSKSKASATVLNSDLNHSQKSRPKSNVH
PVSKPISEAPKAKHTSHFEQIQGSGSNHKTRPPFQHGSQLNPTRAKHLAPASRETNAGHC
SQSQSTSKAAANSASGSNSRAGPSLKPRAKPWVATVPTPVHVNHTKASRKIYQTKEQEVD
QRRDHPTQTEGRKHERKEDRHREKPKGKGERKEDRRLAEEQLLRRPWIQSSAEEEEEEEE
EGVIERQRRREETAKGENRRKEQQHRREWQTVQVRQRPPTEAKQHRPKDDSNRQGATKKG
GRAEEERELQADLSPPPSRCPTPHRRSSSSSSSHSDSESERPITKVPADSTSHKRLAKRG
QQGAGRPDANRPKAAPPRGATAHPSEGQQSEARKKLYTLVPFGRGDQATVYSQRGLRNLV
VQIDLGLLKRVPDSTSGPSVKKPSSSPSTSLLTKDKQRDTMKHLYTPETVTKDSKRKRKL
ENGVSHREGKRSLPHAGGDLSDRTEPLAHTAGRNFVTETTHNGFLEEYLDSKRPLSPLSP
LSPLSPLSNSPESTKPPPKTKTSEQHHSHKNRDKTRDSAVKPKMEVECVKVSRQTQPPSE
CWGPAGHQGTVTKYETPHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKA
MEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFR
LKKDHALKYSKVLLDYFKSSPKVPSTPPCWNDSGKGAEGAPPSLSPNAKHLARSSHGGST
SPTFISIPQRIHQMAANHLTITNSVLYSYEYWEVADNLAQENKEFFNYLNTLSGPLTLHS
SIAHTVQFTRQALQWIRISAKLN
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcctcggcggcagagagaaactttccatcgtctgttttctgctccgatgc
gcgtattctcaggtaacaggaagccaacacaacagctgtgccaaagatattctggaggac
atgactcagtcgtggccgtcacagcaagccttagggggtgaccaggcccgacaaatcctc
tacaacccaaaggacgtgaaacaatcgactacacagcaaaggcaaagtcggggggatgtt
cagcagcgattgacccgtcaccctcatgtggcacctcacaaatccatgctcgctgatgac
ctgaagctgagcagtgacgatgatgacactcagagggccactcacgagtcagcgccctgg
gacagacacagcctgtcagcacagcgagcgcacacacatggcaggcgggtgagacattcc
agctcggactcctcgggctcagactccaccgtcgggtcgggcagcagcagccctcgttcc
cgcagcccgagcccggacgttcacccagatcctgcctcgccggccaacgtgcagccgccg
tgcaacagcaaggagactgatcaccccgctgcggcccagtggcagttggacaaatggctg
aagaagtcccacaaaaaatctgacagcagtgaacaggatccgtcccggagcgctaggaga
cgcttgccctctccccacaccgagcgtgccccatccccagccaggtcctgggacagcaat
caggaatacagccccagtcaaagccctattcccagcccacagttcaattacagccacaac
aacacccctcttcccagccctggttacagctacggtccgagccccagccccttcaccagc
acctgccccagccccagcccgaggctcagctccatcctcagtccagctctaagtgtttgc
ctcagtccgtgtggaagcccgagaggcagccgcagcccgagcccccttcctacacatcct
ccgagaagcccaagtcccagcttaccgtctccttcaaggcaccgacactaccctgagatt
caaacacaaactgtccaaacaaccaatccccacaggacaaaagctaggtcgtggatcccc
ccgttgcctaacaccaagaacaagcccacaaacggttctcaccctcaggcgactcatcag
cacaggcccaggacccgaccaacgcacgaccaagagccaagcaaatcgaaggcctctgct
acagttttaaactctgacctgaatcacagccaaaaatcgagacccaagtctaacgttcat
ccggtttctaaaccgatctcagaggctcccaaagccaaacacacttcacattttgagcaa
atccagggcagcgggtccaaccacaagaccaggcctccgtttcaacatggctcacaactt
aaccccactagagcaaagcacttagctcctgctagtcgtgaaaccaacgctggccactgc
tctcagtcgcaatctacctctaaagctgctgctaattctgccagtgggtcgaactcgagg
gctggtccgagcctgaaaccaagggccaagccgtgggtggccacagtgccgacacctgtg
catgtgaatcacacaaaagcgtcaaggaaaatataccagaccaaagaacaggaggtggac
cagagacgagatcatccaacacaaacagaggggagaaaacacgagaggaaagaggacaga
catcgggaaaaaccgaaaggaaaaggggagagaaaggaagacaggaggctggcggaggag
cagctgctgagacgtccctggatccagagttcagcagaagaagaagaggaggaagaggag
gagggagtgatagaaaggcagaggaggagagaggagacagcaaaaggggaaaacaggagg
aaggagcagcaacatcgacgtgaatggcaaacagtgcaggtcagacagagaccacccact
gaagccaagcaacaccgacctaaggacgactcaaaccgccagggggcgacgaaaaagggt
gggagagctgaggaggagagagagttacaagcggacctttcacctcctccgtcacgttgc
ccgactccccatcgccggtcctcctcatcctcttcctcacattcagattctgaatccgaa
cgtccgatcaccaaggttccagctgactccacctcccacaagagactcgccaagagaggg
caacaaggcgcgggcagacccgacgccaacaggcccaaggcagcaccccccagaggtgcc
actgctcatccaagcgaggggcagcagagcgaggccagaaaaaaactctacaccctagtc
ccgtttgggcgaggtgaccaggctacggtttattcccagcgagggctcagaaacctggtg
gtgcagatcgacctcggtcttctcaaacgggtcccggacagcacgagtggtccctctgtt
aaaaaaccctcttcctctccttccacctccttgttaaccaaggacaaacaaagagacacc
atgaaacacctgtacacacctgagactgtgacaaaagacagcaaaaggaaacgcaagttg
gagaacggtgtgtcacacagagaaggcaagaggagtcttccccacgccggaggagaccta
tcggatcgcacagagcccttagctcacacagctgggcgcaactttgtgaccgagaccaca
cacaatgggttcttggaggagtacttagacagcaagaggccactgtctcccctgtctccc
ctgtctccactgtctccactgtccaacagcccagagtccaccaaacctcctcccaaaact
aagacttcagagcagcatcacagccacaagaacagagacaagaccagagattctgctgtg
aagcccaagatggaggtggaatgtgttaaagtgtccagacagacccagcccccgtctgag
tgctggggccctgcaggacaccaggggaccgtgactaaatatgaaactccacaccatgct
gagtactacttacacgaagctaaaaggatgaagcatcgagccgacgcaatggtggacaaa
ctggggaaagctgtgaactacgtggatgctgctctctccttcatggagtgtgggaaagcc
atggaggaaggaccgctggaggcaaaatctccatataccatgtactcggagacagtggag
ctcatcaggtacgcaatgaggctgaagagccactctggccctggggcgagacaggaagac
aaacagctggcggttctgtgtttccgatgccttgccctactttactggcagatgtttcgg
ttaaagaaggaccacgctctgaaatactccaaagtgctgctcgactatttcaagagttct
cccaaagtgccttctacaccgccctgctggaatgactctgggaagggtgcagaaggagcc
cctccgtcactctcacccaacgccaaacaccttgcacggagttcacatgggggcagcact
tcccccaccttcataagcattccccagcgtatccaccagatggcagcaaatcatcttacc
attaccaacagtgtgctgtacagctacgagtactgggaggtggccgacaacctcgcacag
gagaataaagagttcttcaattacttgaatactttatctgggccattgactcttcacagt
agcattgctcacacggtccagttcaccagacaggctcttcagtggattcgcatcagtgcc
aaacttaactaa
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