Hippoglossus stenolepis (Pacific halibut): 118120029
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Entry
118120029 CDS
T08308
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118120029
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118120029
Endosome - Golgi transport
Rab GTPases and associated proteins
118120029
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
118120029
NCBI-ProteinID:
XP_035030520
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All DBs
Position
13:complement(20456374..20478755)
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AA seq
1136 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTERSNAFFLLQRRRGHGESTGRITGLLVGALDTVLDSNARVT
PFRILLQVPGSQVSWVIASGAAIEELNKHWDWLLRNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEEPEKFREALLKFELHFGLPSSEKLVTYYSCCCWKGRVPRQGLLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTEAILVHTRQRQREFSMFLNLDEV
FGVVGQLADIALRRLLDSEGLELDRVLQQPARITKRVLEEQALREYVLALFRLPRGERLH
EVASCSVWTPHARCHTSGTLYTADNYLCFSSREEGNCILLIPLAEVLSIEKAESTNLLPN
PVIVSLRTKKAFQLIELQDRDELVESLNSRLRALQWKQSMFRSKKDSRRSLRSPTPYYTF
YYDTGHSDEEEIEEQVLRNTVNSEALMTAFHQNQPGTNGNKSMEQVKERLWDEHFSEFGR
GVHMFRTEKIQRLVAMGIPESLRGELWMTLSDASSELESHQGYYTSLVKKSMGQSSLATE
EIERDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYAKEEE
AFWLLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRERLPELAEHVPDLSALSSVSLSWF
LTLFLSVLPFHSAVCVVDCFFFHGIKANFQLGLAVLEANAAQLSACTDDGQALMILTGFL
EQVGSEASSSPPSSPPSSPLSSPPAADERGRSDSEVPVVHANITDLINESYEKFGDLTVR
QIERLRCRHRIRVLQAHEDTTKENALRLVTPDVSIPSENLADVYDLFKTEHFISLYWGDS
SSAAAAEAAAWSYMDSGRSYLERQYRLDRPQFKSLYGLLVPWPGDSNQHMDTVANRTFTL
LDQDQDNLVTFREFAGWLDTLYCEELNEKVRLLYRLHIPPALTESEDDPSLMKSPLLSTN
RPLCVNKPSGGEEEVKEDYQEQLKRMLRDLAKEKEKDVKKPLPLMNQREFIQFCKTLYSM
FHGEAEENDLFQAIATVTSLVLQIGEASHRGLSSSESEVTSQEEVKGAQPTQTAEDAGAD
KEWTISFAQILASLLTEQALVNFFEKPADLTEKISEAKEKQYQQRAGLLTLQRRSS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaacccggaggaagttctgctgaaaaacgctctgaagctgtgggtgacggag
aggagcaatgccttcttcctcctgcagaggaggagaggccacggggagtcgactggcagg
atcacaggtctcctggtgggagcgctggacacggtgttggactccaacgccagggtcacg
cccttccgcatcctcctccaggtcccaggctcccaggtcagctgggtcatcgcgagcgga
gctgccatagaggagttgaacaagcactgggactggctgctccgcaacctgctccactct
ctgtctgtgtttgagaacaaggaggatgtcgccagcttcgtcaaaggaaaagtgaagggc
cttatagcggaggaggttcggggtcgccaggctgctcaggaggaggagccggagaagttc
agggaggctctgctgaagttcgagttgcactttggcctcccgtcgtcggagaagctggtg
acgtactactcctgctgctgctggaagggccgggtgcctcggcagggcctcctctacctc
agtatcaaccacatggccttctactccttcctgctggggaaggaagtaaaatttgtcatt
ccctgggcagaggtgacgcggctggagcgggtctccaccggtctgatgacggaggccatc
ctggtccacacccggcagcggcagagggagttctccatgttcctgaacctggatgaggtg
ttcggggtcgtaggtcagctggctgacattgccctcaggcggctgctggacagcgagggt
ctggagctggaccgagttctgcagcagccggcgcgcatcaccaagagggtcctggaggaa
caggcattgagggagtacgtcctggctctgtttcggctcccccgcggtgagaggctccac
gaggtggcgtcctgctcggtctggacgccacacgcccgctgccacacgagtgggaccctc
tacactgccgacaattatctgtgtttctccagccgagaggaaggcaactgcatcctgctc
atacccctcgctgaggtgttgtcgatagaaaaagcagagagcaccaacttgcttcccaac
cccgtcatcgtgagcctccggacgaagaaggcgttccagctgatcgagctgcaggacaga
gacgagctggtggagagcctgaactccagactccgagctctgcagtggaaacagtccatg
ttccgcagcaagaaagacagcaggaggagtttgcgctcgccgaccccgtactacaccttc
tactacgacactgggcattcagatgaggaggagatcgaggagcaggttctgcgtaacacg
gtcaacagtgaggctctgatgacggccttccaccaaaaccaaccagggaccaacggcaac
aagagcatggagcaggtgaaggagcggctgtgggacgaacacttctccgagtttggacgc
ggcgtccacatgttccgcacggagaagatccaaagacttgttgccatggggataccggag
tccctgcgaggggagctgtggatgacgctttctgatgcatcctcagagctggagtctcat
cagggctactacaccagcctggtgaagaagtccatgggccagagcagcctcgccaccgag
gagatcgagcgggacctccaccgctcgctgccggaccaccctgccttccagaaccccacc
ggcatcgctgcactccgacgtgtcctcaccgcctacgctcatcgcaacccaaagatcgga
tactgtcagtctatgaacatcctggcgtcggtgctgctgctttacgccaaagaggaagaa
gcgttctggctgctggtggctgtttgtgagaggatgctgcccgactacttcaaccgcaga
gtcataggagctcaggtggaccagtctgtgttcgaggagctgatcagggagcgtttgccg
gagctggccgagcacgttccagacctctccgccctctcctccgtctccctctcctggttc
ctcaccctcttcctcagcgtcctgcccttccacagcgccgtctgcgtggtcgactgcttc
ttcttccacggaatcaaagccaacttccagctgggtttggccgtgctggaggccaacgcc
gctcagctctccgcctgcaccgatgacggacaagcactcatgattctcacaggttttctg
gagcaggttggaagtgaagcgtcgtcttcccctccgtcgtcccctccgtcgtcccctctg
tcgtccccgcctgctgcagacgagagaggccgcagcgactctgaggttcccgttgttcac
gcaaacatcaccgacctcatcaatgagtcgtacgagaaattcggagacctgacagtgcgg
cagattgagaggcttcgctgtcgacacaggatccgggtgctgcaggctcatgaagacacc
accaaagaaaacgctttaagattggtgactccagatgtttccatcccttcagagaacttg
gctgacgtctacgacctcttcaagactgagcactttatcagcctgtactggggcgacagc
agctctgcggcggcggcggaggcggcagcgtggagctacatggactccggtcgctcctac
ctggagcggcagtaccggctggaccggccccagttcaagagcctgtacgggctgctggtg
ccgtggcccggggactcgaaccagcacatggacacggtggccaaccgcaccttcacgctg
ctggaccaggaccaagacaacctggtgacgtttcgagagtttgccggctggctggacact
ttgtactgtgaggagctgaatgagaaagtccggctcctctatcgcctccacatcccacca
gctctgacagaaagtgaggatgacccctctctgatgaagagtcccctgctctccaccaac
agacccctctgtgttaataagccctcaggaggggaagaagaagtgaaggaagattatcag
gagcagctgaagcggatgctgcgggatttggccaaagagaaggagaaggatgtgaagaaa
cctctgccgctcatgaaccagcgggagttcatccagttctgtaagaccctctacagcatg
ttccacggcgaagcggaggagaacgacctcttccaggccatcgccaccgtcaccagcctc
gtgctgcagatcggcgaggccagccaccgtgggctcagctcctcggagtcggaggtcaca
agccaggaggaggtgaaaggagcgcagcccacccagactgctgaagacgcaggggcagat
aaggagtggacgatcagtttcgctcagatcctggcgtcgctgctgactgagcaggcgctg
gtgaacttcttcgagaagccggctgacctcacggagaaaatctccgaggccaaggagaag
cagtatcagcagcgggccggtttgctcacgctgcagcgacggagcagctga
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