Hippoglossus stenolepis (Pacific halibut): 118120058
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Entry
118120058 CDS
T08308
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118120058 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118120058 (clasp1a)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118120058 (clasp1a)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118120058 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Vac14_Fab1_bd
Sec7-like_HUS
MMS19_C
Cnd1
Adaptin_N
MMS19_N
ParcG
Dopey_N
HEAT_DAAF5
TAN
Paxt-1_C
INTS1_R4
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
118120058
NCBI-ProteinID:
XP_035030562
LinkDB
All DBs
Position
13:complement(3090804..3150146)
Genome browser
AA seq
1652 aa
AA seq
DB search
MTEPSMENCLALVLQKDVGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSHFKVALLGLDLLSAFVTRLQERFKAQVGTVLPSLIDRLGDAKDQVRDQDQTVLLKIM
EQAATPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMNSLVAIYKHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMISSSGSD
KNFEDEDSVDGGRSSSSASSKAPPSGRRTVISSVRRPSSATTTKPTGKEAAAGAVDEEDF
IKAFEDVPSVQIYSNREFEDQLSKIREVLNDDKHDWEHRVLALKKVRSLIFAGAIEYEGF
AQQLRLLEAPLKMSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESIMPTLLNLVPNSA
KVMATSGVVTIRLILRNTHYPRLIPIITSNCAAKSVAVRRRCFEFLDLMLQEWHTNTLER
HVAVLTETLKKGIHDADSEARSIARKCYWGFHAHYSREAEHLFQALESPYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGASMTRSKLVSARVSTTPGSLQRSRSDID
VNAASSAKSRLSTVPAASSPFSSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAN
TSVVDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRTTVSASTTPA
DKRTRIPRSQGCSRETSPSRLGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTS
RESSRDTSPARGFGPMASRRHSRSTSALSTSDPHGQSDRYGLIHQARISASVNAMRVLNT
GTEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIP
HYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADP
HSKRVFSMFLETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRE
SFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLGRHMDPTDFVNSSETRLAVSRII
TWTTEPKSSDVRKTLHSWVSEELAGRSSTAALLSTEGNQEERCKQAAQVVLISLFELNTP
EFTMLLGALPKTFQDGATKLLHNHLKNSSNTSSNVGSPSNTIGRTPPRHTPSRTSPLTSP
TNCSHGGLSPSRLWGWGVDGLSKHPPAPAPAPAPPPPPQPHSAPAAPSLRVLRRAYSPSM
MEYDTENMNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRREGKRDDAAGREGVASSPGS
DARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRGREFAPYGYGDSICTYDKSALKEAV
FDDDVEQFRDCRRQESGENKMTLPKVFAPVGQDHSDLVADLLKELSNHNERSEERKGALV
ELLKITREDSPSVWDEHFKTILLLLLETLSDKDHTIRAMALRVLKEILKNQPARFKNYAE
LTIMKTLEAHKDSHKEVVRAAEEAATTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQ
TKVIERITKDSLVTLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQL
TGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacccagcatggagaactgcctggccctggtcctgcagaaggatgtgggccga
cggctgcaggtgggacaggagatcatagattacattttggacaaggagaaatctcacgac
ctggagcaggatcagacggcgctggacaagatggtcgacggcatcgccagctcctgggtc
aactccagccactttaaggtggctctgctcggcttggacctgttatctgccttcgtgacg
aggttacaggagcggttcaaggcccaggtgggaacagtcctgcccagcctcattgatcgt
ctgggagatgccaaagaccaagtgcgagaccaggaccaaacagtgctgctaaagatcatg
gagcaagctgccaccccacagtacgtatgggacaggatgctgggaggcttcaaacacaag
aacaacaggaccagagaaggagtgtgcctttgcctcatcgccacactgaacacatatgga
gctcaaggcctgaccctcagtaaaattgttccccacatatgtaatcttttgggggacccc
acaagtcaggtgcgtgatggagccatgaactccttggtggcgatctacaaacacgtgggt
gagagggtgaggatggatctcagcaaaaagggcctgccgcagtcacggttgaatgtaatc
ttcagcaaattcgatgaagtccaaagatccgggaacatgatttcatcttctggctcagat
aagaacttcgaggatgaggactctgtggatggaggccggtcctcctcctccgcctcctca
aaagcaccccccagtggcaggaggactgtaataagctctgttagaagacccagctcagcc
accactactaagcccacagggaaagaagcagcagctggtgcagttgatgaagaggatttc
atcaaggccttcgaagacgtgccctctgttcagatctactctaacagagagttcgaggac
cagctgagcaagatcagagaagtgctgaacgatgacaaacacgactgggagcaccgagtg
ttggcgctgaagaaggtgcgttcgctcatattcgccggcgccattgaatacgagggattc
gctcagcagctgcgtctccttgaggctcctctcaagatgtcagctaaagacctgcgctct
caggtggtccgcgaggcctgcatcacactgggacatttgtcctcacttctgggaaacaag
tttgaccacggagcagagagcatcatgcccacgctgctgaacctcgtgcccaacagcgcc
aaagtcatggccacgtccggggtggtcaccatccgcctcatcctcaggaacacacactac
ccacgtctcattcccatcataaccagtaactgcgccgccaaatcagtggcagtaagacga
cgctgctttgagttcttggacctcatgttacaagagtggcacaccaatacactggagaga
catgtggctgttcttactgagaccctcaagaaaggaattcacgatgccgactctgaggcc
agatccattgctagaaagtgctactggggtttccatgctcactacagccgggaggcagag
catctgttccaggcgctcgagtccccctatcagaaggccctccagtctcacctgaagagc
tcggacagcatcgtgtctctaccccagtccgaccgatcctcatcctcttcccaagagagt
ctgaaccggcctttgtctgtgaagagtgtcatcggagcgagcatgacaaggagtaagctg
gtgagcgccagggtgtccaccacaccgggttccctccagcgttcacgcagcgacatcgac
gtaaacgcagcctccagcgccaagtcacgcctgtccaccgtccccgctgcctcctcacca
ttcagctctgcagccgcccttcctccagggtcctacgcctcattagatggcactcctggt
aaaagtgatggtcgtgttcgtaccaggagacaaagctccggcagcgtgggtggagccaat
acttcagtggtggacagcagggggcgaagtcgagccaaagtggtctcccagtcccagcga
tccagatcagccaatcccatcagtgctggcagtcgctccagctccccaggcaagctgctc
ggccacagcagctatggccggatccctcgaaccacggtgtcggcctccaccacgccggcc
gacaagcgcaccaggatccctcgaagccagggctgcagccgagagacgagtcccagccga
ctgggtctggccagcctgtgtggtaaagctcttcttcctgctgctcttccctaccgcacg
ctagcccggagccgcattccccgtcccagcatgagtcaaggttgtagtcgcgacaccagt
cgcgagagcagccgcgacaccagccctgctcggggcttcggccctatggcttcccgacgt
cactcccgttcaaccagcgctctctccacatccgacccccacggccagtcagaccgttac
ggtttgattcatcaagcaagaatctctgcatcagtcaacgccatgagggtccttaatacc
ggcaccgaggtggaggcagcggttgctgatgctctgctattaggagactcccggaataag
aggaagccactgaggcggaggtacgagtcaccggggatgtactctgacgatgacgccaac
agcgatgcgtccagcgcctgctccgagcgctcgtacgggtctcgaaacggaggtatacct
cattacctgcgccagacagaggacgtcgcagaggtcctcaaccactgcgccagctccaac
tggtccgagaggaaggagggactgctgggtctgcagaatctcctcaagagccaaagaata
ctgagtcgagtggagctgaagagactttgtgagatcttcacaaggatgtttgcagatcca
cacagcaagagagtgttcagcatgtttctggagacgctagtggacttcgtcaccgtgcac
agggaggacctgcaggactggctgtttgtcctgctcactcagctgctgaagaaaatgggg
gcagacctgctcggctccgtccaggccaaagtccagaaggccctggacatcacaagggag
tctttcccgttcgaccaacagttcaacatcctgatgaggttcatcgtcgatcagactcag
acgccaaacctcaaggtaaaagtggccattctgaagtacatcgagtccctgggtcgacac
atggacccgacggactttgtcaactccagcgagacgcgcttggcggtgtctcgcatcatc
acctggacgactgaacccaagagctctgacgtcaggaagacccttcatagctgggtgagc
gaggaactagctggcaggtccagtactgcagccttactgtccaccgagggcaaccaggaa
gaaaggtgtaagcaggcagcgcaggtggtcctgatctccttgtttgagctcaacaccccc
gagttcaccatgctgctgggggctctgcccaaaaccttccaggacggagccaccaagctg
ctccacaaccacctgaagaactccagcaacaccagcagcaacgtgggctcaccgagcaac
accattggtcggacgccgccacgccacacccccagcaggaccagccccctcacctctccg
acaaactgctcccacggcggactgtctccaagtcggttatggggttggggtgtcgacggc
ctgtcaaagcacccccctgctcctgctcctgctcctgctcctcctcctcctcctcagcct
cactccgcccctgctgccccctccctcagggtcctgcgcagagcatattcacccagtatg
atggagtatgacactgagaacatgaactcggaggagatctacagctcgctccgtggtgtc
actgaggccattcagagcttcagctaccggagccaggaggacctgaatgagccaatcaga
cgggagggcaagagggacgacgctgccgggcgagaaggagtagcgtcgtcccctggctct
gacgctcgcttgggcttggacgtggtggaaggaggtcgcactgccttggataacaaaacc
tctctgctcaacacgccctcgcctcgctcgttctccgggccgcgcggccgcgagtttgct
ccttatggctacggcgatagcatctgtacctatgacaagagcgccttgaaggaggccgtc
ttcgacgatgacgtggagcagttccgcgactgccgacgtcaggaaagtggtgaaaacaag
atgacgctccccaaggtctttgctcccgtcggtcaggaccactctgacctcgtagccgac
cttctcaaggagctgtccaatcacaacgagcgttcagaggagcgtaaaggtgccctggtg
gagctgctgaagatcacccgagaagacagcccgtccgtgtgggacgagcactttaaaacc
atcctgctcctcctgctggagacgctgagtgataaagatcacaccatccgagccatggcc
ctgcgcgtgctcaaagaaatcctgaagaatcagccggctcgcttcaaaaactatgcggag
ctgacgatcatgaagactctggaggcgcacaaggactcgcacaaggaggtggtgcgtgca
gctgaggaggctgccaccaccctggccggttccatccacccggagcaatgcatcaaggtc
ctgtgccctattgtccagacggccgactaccccatcaacttggctgccatcaaaatgcaa
actaaagtcatcgaacgcatcaccaaggactcactagtgacgctgctgcccgacatcatc
cccggactcctgcagggctatgacaacacagagagcagcgtacgcaaggccagcgtgttc
tgtctggtggcgatctactctgtgattggcgaggacctcaaaccccatctggctcaactc
acgggcagcaagatgaagctactgaacctgtacatcaagcgagcccagacgaccaacagc
aatagcagcagctcctctgacgtctcctctcacagctaa
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