Hippoglossus stenolepis (Pacific halibut): 118120064
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Entry
118120064 CDS
T08308
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118120064 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118120064 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118120064 (si:ch211-269e2.1)
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GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
tRNA_bind_3
NFACT_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
118120064
NCBI-ProteinID:
XP_035030601
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All DBs
Position
13:complement(18984550..18998467)
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AA seq
1181 aa
AA seq
DB search
MIPESTAAAASRSSEQTKKSHDEANSSGAVNHSEDESGNENQQKNVRRRKRAHKGSENVK
RKSARAGCSSVGRARGRRGKRRHVENVTLFEVITMGRSAMRAVIDDWIKAYVTDRDSSLL
DLISFFIQCCGCKGVVTAEMCQSREDSDVMSKMVEELDEVASLQYKKFLAFPWILTVTWP
MDTDSVEYPLTQSGPYGRWFHSEFCDFVSVLVAQCQHSVIFDSYLMNTLISLLTELSNSY
IRAFRHTCTLAAVKLLSALVGVALSLSVGIENSQKLYKVPKTKTTRQKLTPQLERIQKKI
AELQGKRVEIESMMDIVFKGVFLKRYRDVLPEIRSICVEELGLWMKLYSSEFLNDTYLKY
MGWMMYDKTPDVRLKCVLGLQGLFGDPLLLPKLDLFTSRFKERMISMTLDKDNEVSVQTM
KLLLLISRTCDDVLSPDDYKQLLQFVYSSQRPLAAAAGELLYLKLLSSGAHTSDSQDEIN
EEEAHKLQTSARLKSLLQFHQESELHKHVVYLVDSLWDCGGALLKDWAALTSILLQEPSS
HGPGLTLAEQALLVEILVASVRQASEGPALAGRSGAKKALNAREKKIQIDDCTKLTEHLL
TVLPKLLNKFSSSSDVVASLLRIPQFFIPECPEAENTQAVSSLMAELGAVLDFHSGPVVV
EAAARTYLSLCGEETSCGSVARDARDSLVQTWVDKLTVLLEDSLQVGDCFSADEEKTGDI
LSTLRKLRAFHNCHDLSRWSLFQLLSPLLSAGGAPPEVLLEVLQCLCFFMIWSLNVSSGT
LTSREKAVAQRLQLRLFCERSHRCLSHSDHSVRHQAFLGVCDVLVAHSYQTHVWDPTSFG
PLLHTPSPKLQRALSTFVCMHVFVGPDCDSQSRVSEGSEVERLEDLHRRRNLLAAFCKLI
VHGVLEMSTAAEVFMYYTKYYNDFGDIIKETMYRARQTDKIESSRTLVLCLQQLFVRLKK
EQESGGRAQAGVQTFTSIKELARRFALTFGDPVKFRECVVMMHRTGIEFVFQEFNQTPET
PTPPLLSYLTILSEFSSKLLKPDKKTVFMYLQKHTAELFINLRDECWQPLVYYRASLLTA
AEGEDAVSYVSSDRKPCPPNRSPFSKQKLEGTAQNRVTSYCLRATSRVHLFAFQEVSLPA
CSALSIPKLAKVTDLNSVQVIRRKQQTWISFLFHWNLLHEV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgagtccacagctgcagctgcgtctaggtcctcagagcagactaagaaatcg
catgatgaggctaactcctctggtgctgtcaatcattccgaggacgagtcgggaaacgag
aatcaacaaaagaacgtgagaagaaggaaaagagctcacaagggctcagagaatgtcaaa
cgcaaaagtgccagagccggctgcagcagcgtcggcagagcgagaggccgccgcggtaaa
cggagacatgtggagaacgtcaccctgttcgaggttatcactatgggcaggagtgccatg
cgggcggtgatagacgactggattaaggcttatgtgacggacagagactcgtctctcctc
gatctcatcagcttcttcatccagtgctgtggatgcaaaggtgtggtcacagcagagatg
tgtcagagcagagaggacagtgatgtgatgagtaagatggtggaggagctggacgaggtg
gcgagtctgcagtataaaaagtttctggcctttccgtggatcctcacagtgacgtggccc
atggacacagacagtgtggagtatcccctcacacagtcaggtccgtacggtcgctggttc
cactccgagttctgtgacttcgtgtcggtgctggtggctcagtgtcagcacagcgtcatc
ttcgacagttacctgatgaacacgctgatctcgctgctcacggagctgtcgaactcttac
atacgggccttcagacacacctgtacgctcgcagcggtgaagctgttgagtgctctggtg
ggcgtggctctgagcctgagtgtcgggattgaaaacagtcagaaactgtacaaggtgccg
aagacaaagaccacgcgacagaaactcactccgcagctggagagaatacagaagaagatc
gcagagctgcaggggaagagggtggagatagagagcatgatggacatcgtctttaaaggg
gtttttctcaagagatatcgcgatgtgcttccagaaattcgctctatctgtgtggaggag
ttgggtttgtggatgaagctctacagttctgaattcctgaacgacacctacctcaaatac
atgggctggatgatgtacgacaaaacaccagatgtgcgtctcaagtgtgtgttaggtttg
cagggtttgtttggggatcctctgcttctccccaaacttgacctgttcaccagccgcttc
aaggagcggatgatctccatgacgctggataaggacaatgaagtatcagtacagaccatg
aagctgctgcttctcatctccagaacatgtgatgatgtgctgagtccagacgactacaag
cagctgctccagttcgtttactcctcacagcgacctctagcagccgccgcaggggagctg
ctctacttgaagcttctcagctctggagctcatacatctgattcccaggatgaaataaat
gaggaggaggcacataaactccaaacttctgccagactgaagtctctgctgcagtttcac
caggagtctgagctgcacaaacacgtagtgtacctggtggacagcctgtgggactgtggc
ggagctctgctgaaggactgggctgcactcacgtccatactgctgcaggaaccgtcctca
cacggtccaggtcttacactggcagaacaagcactgctcgtagagatcctggtggcgtcg
gtgcgtcaggcctcagagggaccagccctggccggcagaagtggagcgaagaaggcattg
aatgccagagaaaagaagattcagatcgatgactgcactaaactcaccgaacatctcctc
actgttctcccaaagctactgaataagttttcaagtagctcagacgtcgtggcctccctg
ttgaggattcctcagttcttcatccctgagtgtcctgaggctgaaaacacacaggcggtt
tccagcctgatggcagagctgggagctgtgttggacttccactcgggccccgtggttgtg
gaggcagcggctcgcacgtacctgagtctgtgtggagaggagacgtcctgtggctctgtg
gcgcgggacgccagagactctttggtccagacctgggtggacaaactgacagttctgctg
gaggactcattgcaggtgggcgactgtttctctgctgatgaggagaaaaccggagacatt
ttatccacactgaggaaactcagagctttccacaactgccacgacctctctcggtggagt
ctgttccagctgctctctcctctcctgtcagcgggaggagctccacccgaggtgctgctg
gaggttctgcagtgtctgtgtttcttcatgatctggtccctcaacgtgagcagtggaact
ctgacatccagagagaaggctgtggcccagaggctccagctgcgcctgttctgtgagcgg
agtcatcgctgtctctctcactccgaccacagcgtccgacatcaggctttcctgggtgtg
tgtgacgtcctggtggctcattcctaccagacccatgtgtgggatcccacctccttcggt
ccgctgctccacacgcccagtcccaaactgcagagggcgctgtcgacctttgtatgcatg
cacgtctttgttggcccagactgtgacagtcagagcagagtcagcgaaggctccgaggtg
gagaggctggaggaccttcacagacggagaaatctgctggcggccttctgcaaactgata
gtgcacggggtgctggagatgagcaccgcagctgaggtcttcatgtattacacgaagtat
tataacgactttggagacatcatcaaggagaccatgtacagggccagacagacggataag
atagagagttctcgcacactagtcctctgcttgcaacagctgtttgtgcgacttaaaaag
gagcaggagagcggtggcagggctcaagcaggagtccagaccttcaccagcatcaaggag
ctggccaggcgcttcgccctcaccttcggggaccccgtcaagtttcgggagtgcgtcgtc
atgatgcacaggacggggatcgagtttgtgttccaagagtttaaccagaccccggagaca
ccgacgccaccgctcctctcgtacctgaccatcctcagcgagttctccagcaaactgctc
aaaccagacaagaagacggtgttcatgtacctgcagaaacacacagcggagcttttcata
aacctcagagacgagtgctggcagccgctcgtctactatcgtgcttccctactgactgca
gctgaaggggaggatgctgtgtcctatgtcagctctgacaggaagccctgcccgcccaat
cgctctcccttctccaaacagaaactagaaggtaccgcacagaacagagttacatcatat
tgtttacgagctacgtcacgtgtgcatctttttgcttttcaggaagtaagtctccctgcc
tgttcagccctgtcgattccaaagttagcaaaggtcacagatctaaattcagtccaagtc
atcaggagaaaacaacagacgtggatctcttttctcttccactggaacctgctgcacgag
gtctga
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