Hippoglossus stenolepis (Pacific halibut): 118120094
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Entry
118120094 CDS
T08308
Symbol
myo1b
Name
(RefSeq) unconventional myosin-Ib isoform X1
KO
K10356
myosin I
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118120094 (myo1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118120094 (myo1b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118120094 (myo1b)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118120094 (myo1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118120094 (myo1b)
04147 Exosome [BR:
hsp04147
]
118120094 (myo1b)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118120094 (myo1b)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Phagocytosis
Others
118120094 (myo1b)
Others
Actin-binding proteins
Myosins
118120094 (myo1b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118120094 (myo1b)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118120094 (myo1b)
Exosome [BR:
hsp04147
]
Exosomal proteins
Proteins found in most exosomes
118120094 (myo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_16
AAA_22
TPR_Nup160_C
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
118120094
NCBI-ProteinID:
XP_035030681
LinkDB
All DBs
Position
13:complement(6826499..6887509)
Genome browser
AA seq
1168 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLSEDSFLENLKNRFEHNEIYTYIGSVVISMNPYRSLPI
FTPEKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKLVMS
YVAAVCGKGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGG
VISNYLLEKSRVVKQPRGERNFHVFYQLLSGASDESLKKLKLHRDFSKYNYLSLDSAAVN
GLDDAANFRTVRNAMQIVGFMEDEVQSVMELVAAVLKLGNIEFKPDSRSNGSDESRIKDK
NDLKEMCELLGIEQSVLERAFSYRTVEAKLEKVSTTLNVAQAYYARDALAKNLYSRLFSW
LVTRINESIKAQGKTRHKVMGVLDIYGFEIFEDGDNSFEQFIINYCNEKLQQIFIELTLR
EEQEEYIREGIEWTNIEYFNNAVICDLIENNQNGILAMLDEECLRPGTVTDETFLDKLNT
ICAEHLHFESRLSKNSKFLTDHSLPHSCFRIQHYAGKVLYRAEGFVDKNNDLLYRDLSQA
MYKANHKLIKQLFPEGNPAKVNLKRPLTAGFQFKASVGTLMRNLQTKNPNYIRCIKPNDK
KASHIFTDSLVRHQLRYLGLMENVRVRRAGYAFRQPYEPCLERYKMLCKRTWPHWLGPAR
EGVEVLMSDLPVPAEEFSFGRSKIFIRNPRTLFFLEERRRQCLQDLATLIQKIYRGWKCR
GHFLLLKKSQIVVSAWYRRYAQQKKYQKIKSATTVVQSYTRGWQARKLLRELKYQKRCVE
AVTTISAFWHGTQARMELRRLKQEVRNKHAVTVIWAYWQGTKARRELRQLKEEARNKHAV
SVIWAGWQGTKARRELRRLKEEARRKHAVAVIWAYWQGLKIRREYRKFFRANAGKKIYDF
TIQRIMQKYFLGLKSTLPSMSPIDKNWPARPYLFLGGVHSELRRIFHLWRCKKYRSQFTE
EKKAVYEEKLEASELFKDKKALYPSSVSQPFKGDYLEINKNPKYQKLSIAMEDKVLLADV
VNKINRANGKGTARLFLLTKNSVVLADQKTGQVKASVPLPDLTSVSVSTQSDGFFALKLK
EGSASAVKGDFLLSSEHLIEIITKIHRMGTTAADREQLDIDISDEFLVQFKHDKVCVKFI
QGVPKNGNSVSCKRKNNRLLEVSVPSTA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacgtcacttctggacaacatgatcggggtgggcgacatggtcctcctc
gagcccctgtccgaagactcgttcctcgaaaacctgaagaaccgctttgagcacaatgag
atctacacatacattggcagtgtggtgatctccatgaacccctacaggtccctgcccatc
ttcacacctgagaaagtggaggagtatcgcaacagaaacttctacgaactcagtccacac
atctatgctttggcagatgaggcctaccgttcactgagggaccaggacaaggaccagtgc
atcctcatcactggggagagtggggcggggaaaaccgaggccagtaagctggtgatgtca
tatgtggcagcggtgtgtgggaagggccaggaggtgaacaaggtcaaggaacagctgctg
cagtccaatcccgtgctggaggcttttgggaatgccaaaacagtgaggaatgataactcg
tccagatttggaaagtacatggacattgagtttgacttcaagggagatcctctgggtgga
gtcatcagcaactatctgctggagaagtcccgtgtggtgaaacagccacgaggagagagg
aacttccacgtcttttatcagctcttgtctggagcctccgacgaatcactcaagaagctg
aagctgcaccgggacttcagcaagtacaactacctgagtctggactcggctgcggtcaac
gggctggacgatgcggccaacttccggacagtcagaaatgccatgcagatcgtggggttc
atggaggacgaggtgcagtcggtgatggagctggtggccgccgtgctgaagctcggcaac
atcgagttcaagccggactcgcgcagcaacggcagcgacgagagccgcatcaaagacaaa
aacgatttgaaggagatgtgcgagctgctggggatcgaacagtcggtgctcgagagggcg
ttcagctaccgtacagtagaggctaagctggagaaagtctcaaccaccctgaacgtggcc
caggcctactacgccagagacgcccttgccaaaaacctctacagccgtctgtttagttgg
ctcgttactaggatcaatgagagcattaaagcacaaggtaaaactcgacacaaggtcatg
ggtgtgctggacatctatggctttgagatatttgaggatggagacaacagctttgagcag
ttcatcatcaactactgcaacgagaagctgcagcagatcttcatcgagctgaccctgcgt
gaggagcaggaggagtacatcagagagggcatcgagtggaccaatattgagtatttcaac
aacgccgttatctgcgacctcattgagaataaccaaaacggcatcttggccatgttggat
gaggagtgcctgaggcctgggacggtcaccgacgagacgttcctggacaaactgaacaca
atctgtgctgagcacctgcactttgagagtcgtctcagcaagaattcaaagtttctcacg
gaccacagcctgcctcacagctgcttccggatccagcactatgccggcaaggtgctgtac
cgtgccgagggatttgtcgacaagaacaacgacctgttgtaccgagacctctcacaggcc
atgtacaaggcaaaccacaaactcatcaaacagctgtttcctgagggcaaccctgccaaa
gtcaacctgaagagacccctgactgctgggttccagttcaaagcatcagtgggcacgctg
atgaggaacctgcagaccaaaaacccaaactacatacggtgcatcaagcccaacgacaag
aaagcatcccacatcttcaccgactctctggtgcgccatcagttgcgctacctgggcctg
atggagaacgtccgtgtcaggagggcgggctacgccttccgccagccctacgagccctgc
ctggagcgctacaagatgctctgcaagcgcacctggccccattggctaggacccgccagg
gaaggagtggaggtgctgatgagcgacctcccggttccagcagaagagttctcgttcggc
cgctccaagatcttcatcaggaacccaagaacgctcttcttcttggaggagaggaggagg
caatgcctgcaggacctggccacgctcattcagaagatctaccgtggctggaagtgccgc
ggccacttcctgctgctgaaaaagagtcagatagtggtgtcagcctggtaccgccgatac
gcgcaacaaaagaaataccagaagatcaagagcgccaccacagtggtgcagtcctacacc
cgaggatggcaggcccgcaaactcctgagagagctgaaatatcagaagagatgtgtcgag
gcagtgaccaccatctcagcgttctggcacggcacccaggctcggatggagctgaggcgt
ctaaaacaagaagtgcggaataaacatgccgtgacagtaatttgggcatactggcaggga
accaaggcccggagagagctgcgtcagctgaaggaggaggcgaggaataaacacgccgtg
tcggtcatttgggccggctggcagggcaccaaggctcgcagggagctgcggagactgaag
gaagaggcccggcgtaagcacgctgtcgctgtgatttgggcctactggcagggactcaag
atccgcagagaatacagaaagttcttcagggcgaacgcaggcaagaagatctacgacttc
accatccagagaattatgcaaaagtacttcctgggtctgaagagcaccttgccctccatg
tcacccatagacaagaactggcctgcaagaccctatctcttcctgggtggagtccactca
gagctccggagaatcttccatctttggaggtgcaagaaatacaggagccagttcacagag
gagaagaaggcagtgtatgaagagaagctggaggcaagtgagctcttcaaggataaaaag
gctctctacccgagcagtgtgagtcagcccttcaaaggagactatctggagatcaacaag
aaccccaagtaccagaagctcagcatagcgatggaggacaaggttctgctggcggatgtg
gttaacaagatcaacagagcaaatggaaagggaacggctcggctcttcctgctgactaag
aacagcgtggtcctggccgaccagaagacgggccaggtgaaggccagcgtccccctgccg
gacctcaccagcgtgtcggtcagcacacagagcgacggcttctttgctctcaagctcaag
gagggctcagcctcagctgtcaaaggtgatttcttactcagcagtgagcacctgatcgag
ataatcaccaaaatccaccgcatgggcaccacggctgcagaccgggagcagctggacatc
gacatctcagacgagttcctggtgcagttcaagcacgacaaagtgtgcgtgaagttcatc
cagggagtccccaagaacggcaacagcgtgtcctgcaagcgcaagaacaaccgcctgctg
gaggtgtcggtgccctcaacggcatag
DBGET
integrated database retrieval system
