Hippoglossus stenolepis (Pacific halibut): 118120097
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Entry
118120097 CDS
T08308
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8 isoform X2
KO
K16499
protocadherin delta 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118120097 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Protocadherins
118120097 (si:ch211-199f5.1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
FctA
DUF5783
Motif
Other DBs
NCBI-GeneID:
118120097
NCBI-ProteinID:
XP_035030690
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Position
13:14479114..14483008
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AA seq
993 aa
AA seq
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MRLPTEGKITAKMMRGRFITYWYRWIIMFSIHQFLFASVAQGDGNTIRYQTNEEDAPGTV
IGNLAKDMSLSPSHSSKTNFRMMKQFNDSFIRVRESDGQLTVVERIDRERMCRHTPQCLI
TFDVVNFSKERYKLIHVEVEVKDINDNSPEFPSRESIVDISENAAVGSRVPLDPAADADV
GSNYIQSYQISVNSHFTIDVLLRADGVKYAELVLMKELDRETQASYTVELVATDGGNPHR
SGSTKINIRVTDFNDNSPVFDQNSFSVSLPEDAPVGTVILSLNAVDADEGSNGEVVYGFG
KQVPREIRELFHVDSKSGRLTLRSPVDFEDKRTYELDVQATDLGANPTPSVCKIIIHVTD
VNDNAPEISITPMTSITTGIAHISEAAERDSLVALISTLDRDSGVNSQVHCTLFGHDHFK
LRQAYEDSYMIVTAAVLDRERISEYNLTVMAEDFGSPPLRKITQYTVRLTDVNDNAPHFA
KAVYEVSVVENNAPGAYITTVEASDADLGNNGKITYRLVDSVIMGSPVNTFVSLNSVSGS
IYALRSFNYEVMKVLDVHIQASDGGSPQLQSTAVVRLKIVDQNDNQPSIIEPPLYKGSAE
VFLPKDAPAGYVVTQIKATDADEGINAQLSYKITEGGHLGFSINKETGKVHVSRQLTYDL
TDNVKVTVAVSDNGTPALTSTAIIHLSFIEGTLPSLPSFAPNGGEELFEWDMSIAIIIVL
AGSCSLLLLAIILITTICSRRRKETRERGCDEKEDMPNVEKVESGHIDSVIANHKGKVFD
AHPFPEKPQLANSNTTDTGCEDGRQTAGIFESNSRVAEGKLKQGYSTLPGYGKETVRPIT
IWKGNSFTTISARDPHISGKDSGKGDSDFNDSDSDLSADVHKKESPPMNSLWACTSECKV
LGHSDRCWSPSATRPNTSLACAPHLSTFSKTASLPRDSRRENYYPAHVNKPTGLQSVYEK
VQHQEFDYILVGPPTPARIQEADEISIPEYANS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcccaccgaggggaagatcaccgcgaagatgatgcgggggagatttataact
tattggtaccggtggattattatgttttccatccatcagtttttattcgcctcggtggca
cagggcgacgggaatactatacgataccagaccaacgaggaggacgcgccgggcacggtc
attggaaacctcgccaaggacatgtccttgagtccgtctcactcctccaagaccaatttt
aggatgatgaaacaattcaacgactcgttcatcagggtgcgggaaagcgacgggcagctc
accgtcgtggagcgcatcgaccgggagaggatgtgcagacacactccacagtgcctcatc
acttttgacgtggtgaatttctccaaagagcgctacaaattgatccacgtcgaggtggag
gtgaaggacatcaacgacaactctccggagttcccgagcagggagtccatagtggatatc
tcggagaacgcagcggtggggtcccgggtccctctggacccagccgcggacgcagacgtc
gggtcaaactacatccaaagctaccagatctccgtcaacagtcacttcaccattgacgtg
ctcctgagagcggatggggttaaatatgcggaattggtgctaatgaaggagctagacagg
gagactcaggcgtcatacaccgtggagctggtggccacggacggggggaacccgcacaga
tcggggtcaacaaagatcaacatcagagtgacggactttaacgacaatagccccgttttt
gaccagaacagcttctcggtgagtttgcccgaggacgcaccggttggcacagtcatcctg
agcctgaacgcggtggacgcggacgagggttcgaacggggaggtggtgtacgggttcggg
aaacaggtcccccgcgagatccgagaacttttccacgtggatagtaaatcgggccgcctg
acgctcaggagccccgtggatttcgaggacaaacgcacctacgagctggacgtgcaggcg
accgacctgggagccaacccgaccccctccgtgtgcaaaatcatcatccacgtcaccgac
gttaacgacaatgccccggagatcagcatcacccccatgacctccatcaccacgggcatc
gcgcacatcagcgaggcggcggagagggacagcctggtggcgctgatcagcaccttggac
agggactcgggtgtgaacagccaggtccactgcaccttgttcggccacgaccacttcaag
ctgcgccaggcgtacgaggacagctacatgatagtgaccgcggccgtcctggaccgggag
aggatcagcgagtacaacctgacggtcatggccgaggactttgggtcgcccccgctgagg
aagatcacccagtacaccgtcaggctcaccgacgtgaatgacaacgcccctcactttgcg
aaggctgtgtacgaagtttccgtggtggagaacaacgccccgggcgcgtacatcaccacg
gtggaggccagcgacgcggatctgggcaacaatggcaagatcacatacaggctcgtggac
agcgtcatcatgggctccccggtgaacacctttgtgtctcttaactcggtgtctggctcc
atatacgcactgaggagttttaattacgaggtgatgaaagtgctggacgtgcacatccaa
gccagcgacggggggtcaccacagctgcagagcacagctgtcgtccggctaaagatagtt
gatcaaaatgacaaccagccctccatcatcgagcccccgctttacaaaggctctgctgag
gtgttcctgcccaaagatgcacctgcgggttatgtggtaacccagataaaggccacagat
gccgatgagggcataaacgcacagctgtcctataaaatcacagagggggggcacctgggc
ttctccatcaacaaggagacagggaaggtgcacgtgagcagacagctgacatatgatctc
acagacaatgtcaaagtcacggtggcggtcagtgacaatggaacccccgcactcacctcc
acagccattatacatttgagctttatagaagggaccctcccgagcttgccttccttcgcc
cccaatggtggcgaggagctctttgaatgggacatgtccatagccataatcattgtactg
gcagggagctgctctctcctcctgctggctatcattctcattacaaccatttgcagccgc
aggaggaaagagacgagggagagggggtgcgatgaaaaagaagacatgcccaacgtggag
aaagtggagagcgggcacatcgattcagtgattgccaaccacaaagggaaagtgtttgat
gcccatccatttccagagaagccgcagttggccaacagcaacacaacagacacaggctgc
gaagatggcaggcagacagcaggcatctttgagtcaaacagcagggtggcggagggtaaa
ttaaagcagggttattctacgttgccaggatatgggaaggaaaccgtcaggcccataacg
atatggaagggtaattccttcacaacaatctcagcaagagatcctcacatcagcggcaag
gacagtgggaaaggggacagcgacttcaacgacagcgactcggacttgagtgcggacgtg
cacaaaaaggagtcgccgccaatgaacagtctctgggcgtgcacgagcgagtgcaaagtg
ctgggacactcggaccgatgctggagcccctcggccacaaggcccaacacgagcctggcc
tgcgcgccacacctgtccacgttctccaagacagcttcgctcccccgggacagcaggagg
gagaactactacccggctcacgtgaacaaacccaccgggctgcagagcgtgtacgaaaaa
gtccaacaccaggaatttgattacattctcgttggcccgccgaccccggccagaatacag
gaagcggacgagatatcgattccggagtatgcaaactcttaa
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