Hippoglossus stenolepis (Pacific halibut): 118120141
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Entry
118120141 CDS
T08308
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118120141
04091 Lectins [BR:
hsp04091
]
118120141
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118120141
Lectins [BR:
hsp04091
]
C-Type lectins
Others
118120141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
Lectin_C
SUEL_Lectin
GPS
QcrA_N
Motif
Other DBs
NCBI-GeneID:
118120141
NCBI-ProteinID:
XP_047198610
LinkDB
All DBs
Position
13:5950051..5980224
Genome browser
AA seq
2711 aa
AA seq
DB search
MCRTVLELLILVTLGCRSSAEDVFCREHQRAFLGSCFEFVAHHHSFVSAQAWCEESGGHL
AFIQDENTQYFLQKHLDPERDMWIGVARAASLNLQYSAAAEGPLSWLDDSHITFSNWASS
PQPGAACGHILKHSGFQWEATRDCDKKLSFMCQFESRRAIVCAGRNTALQCASGQVLVID
GGFYGRKNVHYCQSTTSTATASTQQCGWVNAVESLTAHCQGRQVCQIAEAVNSFGEPCPQ
LGNYLSVDYHCEEGFTVAMNTVAAVFTDVTITVKWLLTPSRGKPLCRLSTGDGHVFHVDS
PVGLESRVIHRYIYPSTCVVAIDCTSGDMHVTLQKIITILEPVTDITVTRCYAGMQHFHA
TNCKALYGGAFQMQMAVKTGLNISYRIQSEETVFLGFFVVKGNVSHNITVTPEMAKQLGP
GCHQLTIYASNMVTFPEVSTDLQVCILEEVAGLQASVLTGDCLHSSDIAVGVSLEHGAPA
LLLFSLTGDNNSSFYETRDMNARKDIFHIDHPIQGTVQLKLSARNIFSSLEVDVDMFSTC
GNNSVIKPNGHNDDWLSSNTGPRNKHVRVVRSKKQTSDIKIKAKPSASVDSKAKKIDLSI
EDPSSLKDPGERYQWECSDPCKCAGIFEKLTHAIKEECLPDPFEFNKYHFKVIDITNNVI
KKNKYICISRNPKGKKSKISLSCTQGCDPVKGSTDAKIKMSCEKKCPDVVWNIEDPGDHS
SWPAETKSCYVDSGKRPLIEKVNGGTEYTVKYSTLALAKSAGQDVTVVVTHGGKKDEMTK
YTIRTRNSASTQPAATVTTAAAGDTSAAPATTVPVTTSASTISATPNTGTTIGATPNTGT
TISATPNTGTTISATPNTGTTISATPDTGTTISATPNTGTTISATPDTGTTISATPNTGT
TISATPNTGTTISATPNTGTTISATPNTGTTISATPNTGTTISATPNTGTTISATPNTGT
TISATPNTATTTSAKPNSVTTGTATENSATSITTTIAATTGPPVSSSSSESLSCSISPST
GTVLDAFNITCETEIPCSNCHYCFNADGKHLRCSNSNDVAFVFLPLGDSSSNYNLIITAT
VTKDSFVVSTTITAQVLDSAGDSAASVEDLKSTVENAVAQLKEQGLLSGETIGQIIGSVS
DKLSSQSGDSGKADREKLREQMLRILTDAVKEVPINTPQGVHMVARGLTAVIAKEVSSTA
QEEASLLFVNLSSSLVHMVVNKSEESKKEMQSAAGAIVEGASNILDNSSNKNVSDALLVV
LKNIQSALLTFQANNEGPTVIQKNNIGVFVNRVTPGRLHMEPLTFPNCSCPSFSLPALPS
NIFPSDEPVDIRMLSLDKNPFSWNEGGNISGQIASLSLTTKDGSTIHIEDISEDIEILLP
RPVGGQVNTSVLDLGNHSTTIIDIPSADTTLVIKMVPSDDPLPFKLLLGYMSYPTEASYT
AMTEMPQKGKTQEERYTWLVDAKNLKMKTGVHYLVVKPIVGPGIKSINATLSIISISAAC
KFWNESKLEWSSKGCRVGAQTTHLVTQCFCNHLTFFGSSFFVTPNLVDPSRTAELFGTFT
ENPVVVCFVGSLFVAYLLVVVWARRKDIQDTAKVRVSVLEDNDPMDEYRYLLCVSTGHRR
GASTSSQITLTLLGADGTSEPHHLADPKKCVFERGAVDMFLLTTPFSLGDLQGVRLWHDN
SGSHPAWYVGHVMVQDVQTDQKWHFLCNSWLAIDMGDCSLDKVVPVSTETDLKSFSNLFF
MKTTRDLSDGHLWYSVISRPPSSPFTCVQRVSCCFSLLLCTMLTSIMFYGVPTDPSEQTM
DLGHFEFTWQQFMIGVQSSLVMFPVNILIVGIFRNTRPCETSCCKRRAEQQESCSSQTAS
ADMNGHVTLDTIAKDITRIVRSFSKTMKSSIPSAESEFGPGQQADINALLSVVKDYVRQI
YKTGDGAESRTEIVPDVAQPQEPESGGSVHPEIDVEGVQKSNRTQYLYRQMCHIDRALSL
LGSSGFPSPHSYSRALQQVQGMKVFLEDQLLASSRVSPDELVQNKLSPADSTGGDGQKKK
GCCHGGLPWWFIFVGWLLVIATSFVAGFYTMLYGLKFGKDRSVSWLVSMIVSFFQSILII
QPLKVLCLAAYFALVIKKVDEEDFQNVAFDSKAGECKDQQTVRQDRSLYEPPPPGDVERM
KRIKIIEQKAFALLREIFIYTGFMWMLLLVAHGQRDPNAFYLKQHIRNSFSPNVSQSMSL
GDVFTWANTSLLSNLFGVYPGFITDGNSKLVGNARLRQLRVQKNSCQIAGSMLHLVPDCH
ALYSWEVEDMGSYDSGWNQSVGDNNTLSTPSPWTYQTQAQLRSYPVWGKMVLYRGGGFVA
VLGPDLKNASRTIEYLFRNKWLDTYTRAFFVEFTIYNANVNLFCIVTLLLETAAVGAFQF
HSELQSVRLYQSTGSLYIFVMAAEIIYLLFIIYYMFVQGKLMKQQRWTYFSSKWNLLELS
IILLSLSALAVFIKRTLLGDRDMTYYQNHKDQFPSFYETASADSVLQYLIAFLVLLATVK
LWHLLRLNPKMHMVTATLQRAWGDISGFLLIIAIMFTAYSIACNVIYGWKISSYKTLADA
LLTIISLQMGIFNYGEVLDYTPVLGGLLIGSCIVFMTFVVLNLLISVILVAFKQEQINHK
PSEEKEIVDVMLKQIYSFFGIRCKDTKDSLEPDVSGSTGLTLNNSRNILSKSDDLNISQT
SDKPTNDKTVM
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgcacagttctggagctgctgatcctggtaacgctcggctgtcggtcaagtgcc
gaagatgttttctgccgagaacatcagagggcctttctaggctcctgctttgagtttgta
gctcaccatcactcctttgtcagtgctcaagcctggtgcgaggagagcggaggacacctt
gcattcattcaagatgaaaacactcaatatttcctccagaagcacctggaccctgagagg
gacatgtggattggagtcgcacgtgcggcctctctgaacttgcagtattccgccgcagct
gaaggtcctctctcttggttggatgattcacatatcaccttttcaaactgggcaagcagc
ccacagcctggagcggcttgtggacacatactcaaacactcaggcttccagtgggaagcc
acaagagactgcgacaaaaagctgagcttcatgtgccagtttgagtccaggagagccatt
gtgtgtgcaggccggaacaccgctctgcaatgtgcttctggccaagtgttggtgatagac
ggcggtttctatggtcgcaagaacgttcattactgtcaatccacaacctccacagcaaca
gcctccacacagcagtgtggctgggtgaatgctgtggaatcacttacagcccactgtcag
ggccgtcaggtttgccagattgctgaagctgtgaactcctttggtgaaccctgtcctcag
ctggggaattacctgtcagtggattaccactgcgaagaggggttcacagtggcaatgaac
accgtggctgctgttttcactgacgtcaccatcaccgttaagtggctcttaacaccatca
cggggaaaacctctgtgccggctgagcaccggagatggccacgtttttcatgtggacagt
ccagtggggttggagagcagagtgatccacagatatatttatccgagcacgtgtgttgtg
gcgattgactgcaccagcggtgacatgcacgtcacattgcagaaaataattaccatcctg
gagcctgtcacagacattactgtcaccaggtgctacgctggaatgcagcatttccatgca
accaactgcaaagcgctgtatggaggagcatttcaaatgcaaatggcagtaaaaacaggt
ctaaatataagctacagaatccagagtgaggagactgtgttcctcggtttctttgtggtc
aaaggaaacgtttctcataacatcaccgtgactccagagatggcgaagcagctcgggcct
ggctgccaccaactcacgatttatgcatctaacatggtcacgttccctgaagtgtccaca
gacctgcaggtgtgtattttggaggaagtagctgggctccaggcgtccgtgttgacaggt
gactgtctacattcttcagatattgctgttggcgtgtccctggaacacggagcgcctgcg
ctgctcctcttctccctgacaggagacaacaacagctcattctacgagaccagagacatg
aatgcaaggaaagacatttttcatatcgatcacccaattcaaggaactgtacaattgaaa
ctcagtgcgaggaatatcttctcttctctggaagtggatgtggatatgttttctacctgt
ggcaacaactcagtcattaaaccaaatggtcataatgacgactggctgagctctaacacg
gggccgagaaataaacacgtgagagttgtcagatctaaaaagcaaacatccgacattaag
atcaaagcaaaaccttcagcttcagtagatagcaaagctaaaaaaatcgacctctccatt
gaggatccctcctccctcaaggacccgggtgaacggtaccagtgggagtgcagtgatccc
tgtaagtgtgcaggaatatttgagaagctgactcacgccattaaagaagagtgcctacca
gatccatttgaatttaataaatatcattttaaagtgatagacatcactaataatgtgata
aaaaagaataaatacatctgcatcagccgtaaccccaaggggaaaaaaagcaaaattagt
ctctcttgtactcagggctgtgacccagtaaaggggtctacagatgcaaaaattaaaatg
tcatgtgagaaaaagtgtccagacgtcgtgtggaacatcgaggacccgggagaccacagc
agctggccagcggagaccaaaagctgctacgtagattcagggaaaaggccacttatagag
aaggttaatggtgggactgaatacacagtgaaatatagcactcttgctctggccaagagt
gcgggtcaggatgtcactgtggtcgtgactcatggagggaaaaaggatgaaatgacaaaa
tacactataaggacaagaaattctgcctcgactcaaccagctgccaccgttacgacagcc
gcagctggagacacctcagccgctcctgccactacagtacccgtcacgaccagtgcctct
acaatcagtgctacgccgaacactggaaccacgatcggtgctacgccgaacactggaacc
acgatcagtgctacgccgaacactggaaccacgatcagtgctacgccgaacactggaacc
acgatcagtgctacgccggacactggaaccacgatcagtgctacgccgaacactggcacc
acgatcagtgctacgccggacactggaaccacgatcagtgctactccgaacactggaacc
acgatcagtgctacgccgaacactggaaccacgatcagtgctacgccgaacactggaacc
acgatcagtgctacgccgaacactggaaccacgatcagtgctacgccgaacactggaacc
acgatcagtgctacgccgaacactggaaccacgatcagtgctactccgaacactggaacc
accatcagtgctactccgaacactgccaccaccacgagtgccaagccgaacagtgtcacc
acgggcactgccacggaaaatagtgcgacctcgatcaccactaccattgctgcaaccact
ggtccaccagtgtccagcagctcttctgaaagcctctcgtgtagcatatcgccatcgacc
ggaacagtcctcgatgcttttaatataacctgtgagactgaaatcccctgttctaattgt
cactattgttttaatgctgacggtaagcatctgcgttgcagcaatagcaacgacgtggcg
ttcgtcttccttcctcttggagacagcagttccaactataacctgatcatcacagcaact
gttacaaaggacagctttgttgttagcaccaccataacagcacaggtgctggattcagca
ggagactccgccgcttcagtagaggatctgaagtcgacagtggagaatgctgtggcacag
ctgaaggaacagggtctcctgtcaggagagaccataggacaaatcatcggttctgtgtcc
gacaaactgagcagtcaatcgggtgattcggggaaagctgacagggaaaagcttcgggag
cagatgctgcgcatattgactgatgcagtgaaggaggttcccatcaacactccacaaggg
gttcacatggtcgccagaggtctgactgctgtcatcgccaaagaagtcagctccactgct
caggaggaagcctctttattatttgtgaacctcagctcgtctctcgtccacatggttgtg
aacaaaagtgaagaaagcaagaaggaaatgcaaagtgcagccggcgccattgtggaagga
gcgagcaatatcctggacaactcttccaataaaaacgtctctgatgctcttcttgttgtc
ctgaaaaatatccagagtgcactgttgacattccaagctaataacgaggggccgaccgtt
atccagaaaaataatattggtgtttttgtcaatagagtgactccaggaagattgcacatg
gagcctttaacgtttcccaactgttcctgcccctcgttttctctcccagctctaccctcc
aacatatttccttcagatgaaccagtggacatacgaatgctgagtttggataaaaatcca
ttttcctggaacgagggagggaacatcagcggccaaattgcttctctgtccctcacaaca
aaagatggctccactatccacatcgaggatataagtgaggatattgagattctgctgcca
aggcctgttggggggcaggtgaacacctcagttctggacctgggaaaccacagcaccaca
atcattgacattccttcagcggacactacgctggtgataaagatggtgccttcagacgat
ccattacccttcaagctgctccttggttatatgagctaccccactgaagcaagttatact
gcaatgacagagatgcctcaaaagggaaaaacacaagaggagagatacacgtggcttgta
gatgcaaagaatctcaagatgaaaactggagtgcactatcttgtagtgaagcccattgta
ggaccaggcataaaatccattaatgccactttgtcgatcatctccatctctgctgcgtgt
aaattttggaatgaatcaaagctggaatggagcagcaaaggatgcagggttggtgcacag
acgacacatttagtcacccagtgcttctgcaaccacctcaccttcttcgggagctccttc
ttcgtcacccccaacctcgtggacccgtcccgcaccgctgagctgtttgggaccttcact
gagaaccccgtggtcgtgtgcttcgtgggttcgctctttgtggcttatctcctggtggtt
gtgtgggctcgacgaaaagacatccaagatacagccaaggtgagggtgtcagtgctggag
gacaatgaccccatggacgagtaccgctacctgttgtgtgtcagcactgggcatcggaga
ggagcctccacttcctctcagataacattaaccctgctgggtgctgatggaaccagcgag
ccacaccacctggcagacccaaagaagtgcgtgtttgagagaggggcggtggacatgttc
ctgctaacgacacccttctcactgggagatctgcagggtgtccggctgtggcacgacaac
tcaggcagccatcctgcatggtatgtcggccatgtcatggtgcaggatgtacagacggac
cagaaatggcattttctttgtaactcctggttggccatagacatgggagattgttccctt
gataaagttgtccctgtctccacagaaacagatttgaagagtttcagtaatttgttcttt
atgaagacgacaagggatttgagcgacggacacctctggtactctgtgatcagccgaccg
ccgagcagccccttcacttgtgttcagagagtgtcctgctgtttctccctgctgctctgc
accatgctgaccagcattatgttctacggcgtcccgacggacccgtctgagcagaccatg
gacctgggtcactttgagttcacgtggcagcagttcatgattggagttcagagttcactc
gtcatgtttccagtgaacatcctcattgttggcatcttcagaaacactcgtccttgcgag
acgtcgtgctgcaaacgcagagcagaacaacaagagtcctgctcctcgcagaccgcctcc
gccgacatgaatggccacgtcactttagacactatcgccaaggacattacgagaatagtc
cgttcattctccaagaccatgaaaagcagcatcccatccgcagagtccgagtttgggcct
ggacaacaagctgacatcaacgctctcctttctgtggtgaaggattacgtcagacagatt
tataaaaccggtgacggcgcagaatcgaggacagagattgttcccgacgtcgctcagcct
caggaaccagaaagcggtggtagtgtgcaccctgagatagacgtggagggcgttcagaag
agcaacagaacccagtatctgtacaggcagatgtgccacatcgacagagcgctgagcctg
ctgggctcgtccggcttcccgagcccacacagctacagccgggctctgcagcaggtccag
ggcatgaaggtcttccttgaagatcagctcctcgcatccagccgcgtcagcccagatgaa
ctcgtccaaaacaagttgagtcctgcagacagcactggtggtgatggtcagaagaagaag
ggctgctgtcatggagggctgccctggtggttcatctttgtcggctggctgctcgtgatt
gctaccagtttcgtagcaggattttacacgatgctttatggtttgaaatttgggaaggat
cgttccgtcagctggttggtgtcaatgatcgtgtccttttttcagagcatcctcatcatt
cagccactgaaggtgctgtgtcttgcagcctactttgcacttgtcataaagaaagtcgac
gaggaagattttcaaaatgtggcatttgactcaaaagcaggcgagtgtaaagaccaacag
acagtccgacaggacaggagtctttacgagccgcctcctcctggagacgttgagaggatg
aaaaggatcaagataattgagcagaaagcctttgccctcctcagagagattttcatctac
acaggcttcatgtggatgctgctgctggtggcgcacggccagagggatcccaacgccttt
tacctgaaacagcacatcaggaacagcttcagtccaaacgtctcacaaagcatgagtctg
ggggacgtgttcacttgggccaacacgtctctgctcagtaacctttttggagtgtatcca
ggatttatcacggatggaaactcgaagctggtgggaaacgcccgtcttcgtcaactgaga
gtgcagaagaactcgtgtcagatcgcgggctccatgctgcatcttgtgccggactgccac
gcactgtattcatgggaggtggaggacatgggctcctatgactctggttggaaccagtct
gtgggggataacaacacgctgagcacccccagcccctggacgtaccagacacaggctcag
ctcaggtcctacccggtgtggggcaaaatggtgctttacagggggggtggctttgtagcg
gtgcttggccctgatttaaaaaatgccagcagaaccatcgagtatctgttcaggaacaaa
tggctggacacgtacacacgggcattctttgtagagttcaccatttacaacgccaacgtc
aacctcttctgcatcgtcactctcttgctggagactgcagctgttggggcgtttcagttc
cacagcgagctgcagagtgtccgtctctaccagtccactgggagtctctacatcttcgtc
atggctgccgagatcatatacttgcttttcatcatctattacatgttcgtgcagggcaaa
ttaatgaagcaacagcggtggacttacttcagcagcaagtggaacctcctggagttgtcc
atcatcttattgagcttgagcgccttggctgttttcatcaagaggaccctgctcggagac
cgtgatatgacctactaccaaaaccacaaagaccaatttcccagtttttacgagacggcc
tccgcggactccgtgcttcagtatctgatcgccttcctggtcctgctcgccacggtcaaa
ctgtggcacctgctcagactcaaccccaagatgcacatggtcaccgccacgctgcagcga
gcctggggcgacatatctggcttcctcctgatcattgcgatcatgttcacagcgtattcc
attgcctgcaatgtgatttacggctggaagatctcctcttacaaaactctggcggatgct
ctcctcaccatcatcagcttgcagatgggcatttttaactacggagaggttttggactac
acccctgtgcttggtgggttgctcatcggctcctgtatcgtgttcatgacgtttgtggtg
ctgaacctgctcatttcagtcatcctcgtggcgtttaagcaagagcagatcaatcacaag
ccctcagaggagaaggagattgtcgacgtgatgctgaagcaaatctacagtttctttggg
atcagatgtaaagatactaaagactccctggagcctgacgtgagcggcagcactggcttg
accctcaacaacagcagaaatatcctcagcaaatcagacgacctcaacatttctcagaca
tctgacaaaccaacaaatgacaaaaccgtaatgtaa
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integrated database retrieval system
