Hippoglossus stenolepis (Pacific halibut): 118120211
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Entry
118120211 CDS
T08308
Symbol
abca12
Name
(RefSeq) glucosylceramide transporter ABCA12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp02010
ABC transporters
hsp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118120211 (abca12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118120211 (abca12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118120211 (abca12)
Transporters [BR:
hsp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118120211 (abca12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_30
MukB
AAA_23
Motif
Other DBs
NCBI-GeneID:
118120211
NCBI-ProteinID:
XP_047198576
LinkDB
All DBs
Position
13:complement(10362471..10413555)
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AA seq
2812 aa
AA seq
DB search
MSLWARFERASLQDVPMLIGQLGRLVSMFFMGMPDLQQSIGSSMGVFTRLSPLLQQLMSG
KADQHMWDNLEKMLQSLLSSLEGTELWHNVSSVVPLFEKILGSLVNNMQAQNVLLLSLQT
PVVTLMREVARSVNTSHFNLSEVTERIQAAIEHTLQAAQQANGTLGCREALRPWEPVREG
AGLSPAFMAMWCNISLQPVIEAYAAAMTPYSHINMTHMGVGPTTVNATAARIAETMQALY
HVIVNQSLVTEQLISAFSMQLGMLAGRPLSPEAQLYWNRQLQDVQLQNSLSSIKMLTDEL
RKAVPSLQPYIEAVEKAMCFFIINSPLLQNSSTSQDLLKQTAMIFLTSANITAGDIFSAM
SGNVSGLNEASIINAMREVVKLMADLKILGDDPMVYRALEQILASNDTALIVRKVVELTT
WLGSTRASGLDLLMQVVHRMYDILRSILSLLTKLSVQMPENSELFEDLAGNVIGMLKQLL
STPGLLSPMHRQQGMSRPQMASANHSMRVRHKREAQMMQMRDPMDDFIDLFYIDYHTMSK
ALNVAPTTGEILETVHMFFANPDLSVVLKGVTSDMPWGMNASREETIDAALVGLSLFTLP
SAFQMSSEDLLMSAVAMLTDAIPFSPVFKNITRALANESQEILMLMQQTIQTAAELFQSN
MTDQQLQEKLTLLRSQVCALENTETMNQLLWLLSIERGQLCRTILPSLQILAESLLINAS
ALTDAVFQSFIGEPKTYNIDLDWTSVLGQGLGFNTSNLRSLNINVTSPGVVTVGELLRDK
AAFVQDVQRHMDFDPAALHLLMGAVVPNNNLEILSWLVNLRQCNSTSSVNMKASDAAILK
TFCSMSAEQWYSFSLLMVRHLNMEKLLYRVVLSEEMQSLVVVMLQLAETLTDMMNNILPT
INTLQSYLLSIQDLNLMANNEFNLMSRGDKSSISTKATFVTISRALCSNGIMALFGISKL
PPMSEPNPSFPSGQWKEEMIDRFKIPRNATPFCTNMYLEMVNTTGGAIAWAFLKPMLMGK
VLYTPDTPITRDIMEKANATLQEFANLRKNSQDWIQSSNYIINSAELLSNTLPMLQNSLS
NSFVKNFIEMQTDIDVGRMKDTLSSFSNMTVMLEKNKQILNQITTLSTLMVDLSSCIKFD
RYRGYDSAEQLNHEAQELAKDRNLYASVIFKLPKGDGSTKNRHARSSSNASSESSLPPQV
SYTIRMHMDNVMRTDRVREAYFVKDPHLLARQTMRYNRGFVYLQENIDRAIIESQTGKRV
TEPAVQLQPFPYPCHLRDEYLEAISFVFPIMLMLAWVLFIADFVKKLVHERELRLHEYMK
MMGVNPLSHFFAWFVECATYLGVTIIILTLVLKYGKILPNSDGFLMFLYLCDYGLSIIAF
SFLVSSFFDKTYIAGLSGSLLYILCFFPFIVVMSMETKLTFSQKSAMSLFSPTCFSYASQ
YVSRYEAQGEGIQWSNAYMSPIAGDTASFGWLCWMMLIDSMLYFIIGAYIRKVFPGKYGI
PSPWYFPFKASFWADLCCCIKSKTQAGRGLLFNNIMQNNQPVFSNDKEKGKSSLSFQAGE
DFSELPVGVALHSLSKMYADRVAIQNLNVSFHEGHVTSLLGHNGAGKTTTMSLLTGLFAP
TSGTIEVYGRDMQSNIDDIRKELGVCMQYDVLFDHMTTKEHLLLYGQIKAPHWSKGELHE
QVRSTLEETGMYAHRHKRVGTLSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSI
WDIVIQHKKNRTIIMSTHHLDEAEVLSDRIAFLERGGLKCCGSPFHLKDKLGQGYKLTLT
KKLQNLESEVIDSADLKQFIQAHVPEARLKEAQGGDLVYSLPPFTSANASSYRSLLTALD
SNLDALQLGGYGICDTTLEEVFLQLTHDNTESESVPLSISETISDTGSVDSFPSDNGESI
GDKIKLTGSSMVSGMALAWQQMSAILIKRFHHSRRDWKGLIAQILLPVLFVVFAMGLGSI
KSDLRHYPELELSPALYNIGPSYSFFRNQNPSSGNLVDSMMSFPGMDNACLDEQDNPVCA
RNTHKWSSRGNSSKGFSICKCTRQEQVCAEDNYQPPHEIIPSSQVVYNLSGINLENYLVA
TANDFIRNRYGGFDFGMQLPTDLQMDLRAVPKNRTLSKVWFNPEGHHTMPAYLNSLSNLI
LRSNLPADKDPRKYAISVSSHPYFGRADDEDAIVQGMLQILVAVCVLTGYSIMTASFAIY
EVHEHHSGSKRLQHIAGISEPFYWAVNFLYDMVIYMIPVTLTICVIAAFQVPAFTDRQNL
GAVTLLLVLFGFSTFPWMYLLSSVFKDAEMAFITYVCINLFISVNTIMSTSVLYFLGQIS
MRNAELVKIIFERLSYAFLIFPQFNFGNGLMYLARKNIEVQILSGYGIDAYQNPFSTDAL
GWMFISSFIQGVVFFTLRLLLNKFLLRKVWHFICGRKTVPQVACEDEDEDVAAENLRVSS
GAANTDILQVDQLTKIYQHFKRKVPAVKRLSVGIPAGECFGLLGVNGAGKTTTFKMLTGD
VSPSDGTAQIRDLDGRLVDIMECRSKGINIGYCPQEDALDGLLTGEEHLNFYARIRGIPK
RDREGVVNYLLKRLELSYHRNIITDSYSCGTRRKLSTALALIGHPQILLLDEPSSGMDPR
TKRHLWKIISEEVKGKCAVVLTSHSMEECEALCSRLAIMDKGQFRCLGSLQHIKNRFGSG
FTVRMYMAEASCDAEAITGFMQRRFPSTYLKDQHSTMVEYHVPVAPGGVADIFDQLESNK
NALQIKHFSVSQTTLDEVFINFAMGKIGMETIPLQSEEEEWDDLDCKEAVDA
NT seq
8439 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctgggcacgttttgagagggcatcactacaagatgttcctatgctcattggc
cagctgggaagacttgtgagcatgttcttcatgggaatgccagacttgcagcagtcgatt
ggttcatctatgggggtcttcactcgcctgtcccctctcctgcagcagttgatgagtggc
aaggccgaccaacacatgtgggacaaccttgaaaagatgcttcaatccctactctcatcc
ctcgagggaacggagctgtggcacaatgtctcatctgtcgtcccgctgtttgagaaaatc
ctcgggagtttggtgaacaacatgcaagcacagaatgtgttgctactaagccttcagact
cctgtggtaaccttgatgagggaagttgcacgttcggtgaataccagtcacttcaacctg
tcggaggtcacggaaagaatccaggctgccattgagcacacgctgcaggcggctcagcag
gctaatggcacactggggtgcagggaagctctcagaccatgggagccggtcagggagggg
gccgggttgagccctgccttcatggctatgtggtgtaacatcagcctgcagcctgttatc
gaggcctatgctgcagctatgactccctactcccacattaacatgactcacatgggcgtg
ggaccgacgactgtgaatgccacagctgccaggattgccgagaccatgcaggctctgtac
cacgtcattgtcaaccaatcacttgtgacagagcagcttatctcagctttctccatgcag
ctcgggatgctggcaggccggcctctgagcccagaggcgcagctttactggaacaggcag
ctccaggacgtacagttacagaacagcttgtcttcaatcaaaatgctcacagacgagctg
cgtaaagcggtcccatccctccagccgtacatcgaggcggtggagaaggcaatgtgtttc
ttcatcatcaactcccctcttcttcaaaacagcagcacctcccaggacctcctcaaacag
acagcgatgatcttcctaacctctgccaacatcaccgcaggtgacatcttctccgcgatg
tcagggaacgtttccggactcaacgaggcgtctattattaacgcgatgagagaagttgtc
aaactcatggctgacctgaagatacttggtgatgaccccatggtttaccgagccctggag
caaatcctggcatccaacgacacggctctgattgtgcggaaggtggtggagctgactacg
tggttgggctccactcgagcgtccggattggatctgctgatgcaggtggtgcacagaatg
tacgacatcctcaggtccatcttgtccctcctgaccaagctgagcgtgcaaatgccggaa
aattccgagctgttcgaggacctagccgggaacgtcataggaatgctgaagcagctgttg
agcacccctggtctactgtctcctatgcatcggcagcagggaatgtcaaggccacaaatg
gccagcgctaaccattcaatgagggtccgacacaaacgcgaggcgcagatgatgcaaatg
agggaccccatggatgacttcattgacctgttctacatcgactaccacaccatgtccaaa
gccctcaacgttgctcccaccacaggagaaatcttggagacagtccacatgttctttgcc
aatcccgatctgagcgttgtgttgaagggagttacgagtgacatgccgtggggcatgaac
gcctctcgggaagagaccattgatgccgctcttgttgggctctccctcttcacattgccc
agtgcatttcagatgtcgtcggaggatctcctgatgagtgctgttgctatgcttaccgat
gccatcccattctcccctgtgtttaaaaatatcacccgggctctggccaacgagtctcaa
gagatcctgatgctcatgcagcagaccatccaaacagcagctgagctcttccaaagcaac
atgaccgaccagcaactccaagagaaacttaccctcctgagatcccaggtgtgcgccttg
gagaacacggagacgatgaatcagctgctgtggttgctctctatagagcgtggtcagctg
tgccgcactatcctgcccagcctgcagatcctggccgagagcctgctgataaacgccagc
gcgctgactgatgccgtcttccagagtttcattggggagcccaaaacctacaacatcgat
ttggactggacgtctgtgttgggtcaaggtttgggctttaacaccagcaacctgcgctct
ctcaacattaacgtcacctccccaggagtggtgacggtcggagagttgctgagagataaa
gctgcctttgttcaggatgttcagcggcacatggatttcgatccagcagctctgcacctg
ctgatgggagccgttgtaccaaacaacaatttagagatcctgtcctggttggtgaacctg
cgtcagtgcaactccacatcctcggtgaacatgaaagcgtcagacgcggccatcttaaag
accttctgctccatgagtgcggagcagtggtacagcttttcactgctgatggtgcgccac
ctcaacatggaaaaactcctctacagagtggtgctgtctgaagagatgcagagcctggtg
gtggttatgcttcagctagctgagactctaactgacatgatgaacaacattcttcccaca
atcaacaccctgcaaagctacctgctctccatccaagacctcaacctgatggccaacaac
gagttcaacctcatgtccagaggagataaatcatccatctctaccaaggctacgttcgtc
accatctctcgagcgctgtgcagtaatggtatcatggctctgtttggaatctccaagctg
ccccccatgtcggagccgaacccttccttccctagcggccagtggaaggaggagatgatc
gatcgcttcaagattccacgaaatgccactcccttctgcacgaacatgtacctggagatg
gtcaacaccacaggaggagccatcgcctgggccttcctcaaaccaatgctgatggggaaa
gtcctgtacacccctgacacgcccatcacgagagacataatggagaaggccaatgccacc
ttgcaggagtttgcgaatctgaggaagaactcacaggactggatccagtcctccaactac
atcatcaattctgctgagctgctcagcaacactctgccgatgctgcagaattccctcagc
aactcctttgtgaagaatttcattgagatgcagactgacatcgatgtcggcagaatgaaa
gacacacttagcagcttctctaacatgactgtgatgctggagaagaacaaacagatactg
aatcagattaccaccctgtccaccctgatggtcgacctgtcctcctgtatcaagttcgac
cgttaccgtggctacgactctgcagagcagctcaaccacgaagctcaggaactcgccaaa
gatcgcaatctctacgcaagtgtcatcttcaagcttcccaaaggtgacggctcaaccaag
aaccgtcacgccaggtcttcctccaacgcatcttccgaatcgtccctgcctccccaagtt
agctacactatccgcatgcacatggacaacgtcatgcgtacggatagagtgcgggaggcc
tactttgtgaaggacccccacctcctggccaggcagaccatgcgctacaaccggggcttc
gtgtatctgcaggagaacatcgaccgggccatcatcgaatcccagaccgggaagagagtc
acggagccggccgtgcagctgcagcccttcccctatccgtgccatttgcgtgatgagtac
ctggaggccatctcttttgtcttcccgatcatgctgatgttagcatgggtgctcttcatc
gccgactttgtgaagaagctcgtgcacgagagagaactgaggctgcacgagtacatgaag
atgatgggcgtcaacccgctcagccacttctttgcctggttcgtggagtgcgccacctac
ctgggggtgaccatcatcatcctcacgctggtgctgaaatacggcaagatcctgcccaac
agcgatggcttcctcatgttcctttacctgtgcgactatggcctgagcatcattgccttc
agcttcctggtcagctccttcttcgacaagacctacatcgcgggcctgagcggcagcctc
ctctacatcctctgcttcttccctttcatcgtggtcatgtctatggagacaaagctcacc
ttttcccagaagagcgctatgagtttgttttccccaacctgcttcagttacgccagtcaa
tacgtgtctcgctatgaggcccaaggagaagggattcagtggagcaacgcatacatgtcg
cccatcgctggggacacggcctcgttcgggtggctgtgctggatgatgctcatcgactca
atgctctacttcattatcggggcttacatccgcaaggtcttcccaggaaaatatggcatc
ccatctccatggtacttccccttcaaagcctcgttctgggccgacctgtgctgctgcatt
aaatcaaagactcaggcgggcagaggactcctcttcaacaacatcatgcagaacaaccag
cctgtcttctccaacgacaaggaaaaaggcaagagctcgctttccttccaggccggcgag
gatttctctgagctgccggtgggtgtcgccctccacagtctcagcaagatgtacgccgac
cgagtcgccattcaaaacctcaacgtttccttccacgagggccacgtcacctcgttgctt
ggacacaacggagctggcaagaccaccaccatgtctctcctgacaggtcttttcgcccca
acctccgggacaatagaggtgtacggcagagacatgcagtccaacatcgacgacattcgc
aaggagctgggcgtgtgcatgcagtacgacgtcctcttcgaccacatgaccaccaaggag
cacctgctgctgtacggccagatcaaggccccgcactggtcgaagggggaactgcacgaa
caagtccgatcgaccctagaggagacaggcatgtacgctcacaggcacaagcgggtgggc
accctgtcgggcggcatgaagcgcaagctgtcaatctccatcgccttcataggaggctct
cgcttggtggttctggatgaacctaccacaggagttgatccttgctcgaggcggagcatc
tgggacattgttatccagcataagaaaaaccgaaccatcatcatgtccacccaccacctg
gacgaggctgaagtgctcagcgaccgcatcgccttcctggagagaggaggattaaaatgc
tgcggctcccccttccacctgaaagacaagctgggtcagggatacaaactcaccctcacc
aaaaagctgcagaacctcgagtctgaagtaatcgacagtgctgacctgaagcagttcatc
caagcccatgtacctgaagcgcggctgaaggaggcccaagggggcgacttggtctactcg
ctgccccccttcacctcagccaacgcctcctcataccgctccctcctgaccgcgctggac
tccaacctggacgccctgcagctcgggggctatggcatctgtgacaccaccctggaggag
gtcttcctccagttgactcatgacaacacagaatccgagagtgtccccctgtcaatctca
gagaccatttctgacacagggtctgtggacagtttcccctcagacaacggtgaaagcatt
ggtgataagatcaagcttaccggctcatccatggtttctggcatggctctggcctggcag
cagatgtcggccatactgatcaagaggtttcaccacagccgcagagactggaagggcctg
atcgcccagatcctgctccctgttctgtttgtggtgtttgcaatgggcttgggatccata
aagagcgacctacggcactatcctgagctggagctgagccccgcgctctacaacatcgga
ccaagctactctttcttcagaaaccaaaatcccagctccgggaacctggtggactccatg
atgtcattccctgggatggataacgcctgcctcgacgagcaggataacccggtctgcgcc
cggaacacgcacaagtggagttccagagggaacagctctaaaggatttagtatctgtaaa
tgcaccagacaggagcaggtttgtgctgaggacaactatcagccgccacatgagatcatc
ccttcatctcaggttgtttataacctcagtggcatcaacttggagaactacctggtggcc
acagccaatgacttcatcaggaacaggtacggtggattcgattttgggatgcagcttcct
accgacttacaaatggaccttcgagcggtgcccaaaaatcgcactctgtctaaggtctgg
ttcaaccccgagggccaccacacaatgccagcatacttaaacagcctcagcaacctcatc
cttcgctccaatcttccagcagacaaggatccgcgtaaatacgccatttcagtttccagt
cacccgtatttcggtcgggcggatgatgaagacgcaattgttcaggggatgctccagatc
cttgtggctgtgtgcgtgctgactggttactcaatcatgacggccagtttcgccatctac
gaagtccacgagcaccacagcggctccaagaggctgcagcacatcgccggcatcagcgag
cccttctactgggctgtgaacttcctctatgacatggtcatctatatgatccccgtgact
ttgaccatctgtgtgatcgcagccttccaggtcccagcgttcacagatcggcagaacctg
ggtgccgtcaccctcctcctggtgctctttgggttttccaccttcccctggatgtatctg
ttgtcaagtgtcttcaaggatgcagagatggccttcatcacttacgtgtgcatcaacctc
ttcatcagtgtcaacaccatcatgtccacctccgttctctacttccttggccaaatttct
atgcgcaacgctgagctcgtcaagattatcttcgaaaggctgagctacgccttcctcatc
ttcccccagtttaactttgggaacgggctgatgtatctggcgaggaaaaacatagaggtc
cagatcctcagcggctacggcatcgacgcctatcagaacccgttctccacagatgccctg
ggctggatgttcatctcctccttcatccaaggcgtggtcttcttcacgctgcgtctcctg
ctcaacaagttccttctgcgaaaagtctggcattttatttgtggccgaaagacggtgcca
caggtggcttgtgaggacgaggatgaggacgtggcagcagagaacctacgggtgtccagc
ggagcagccaacacggacatactgcaggtcgaccagctcaccaagatctatcaacacttt
aagaggaaggtccctgctgtcaagaggctctctgtgggaatccctgcaggagagtgcttt
ggtctgctgggagtgaacggagcaggaaaaaccaccaccttcaagatgctgactggagat
gttagcccctctgatggcacagcacagatcagggacttggatgggcggttggtcgacatc
atggagtgccgtagcaagggaattaacatcggctactgtccccaggaggacgctctggac
ggtctgctcacaggagaagagcacctgaacttctacgctcgcatccgaggcatcccgaag
agggacagagaaggggtggtgaactacctgctgaagaggctggagctcagctaccacagg
aacatcatcactgacagttacagctgcggcacccgcaggaagctctcgacggcgctggct
ctcatcggacacccgcagatcctgctcctggatgagccaagctctggcatggaccctcgc
accaagcgtcacctgtggaaaattatctccgaggaagtgaaaggaaaatgtgctgtggtc
ctcacctctcacagcatggaggagtgtgaggcgctgtgcagccgtcttgccatcatggat
aaaggtcaattccgatgcctgggctctctgcagcacattaagaacaggtttggcagcggg
ttcaccgtgaggatgtacatggccgaggcctcctgcgacgcggaggcaatcactggcttc
atgcagcggcgattccccagcacttacctcaaggaccagcactccaccatggtggagtac
cacgtaccagttgctccaggaggggtggctgacatcttcgaccagctggagtcaaacaag
aatgctctgcagatcaaacacttctctgtgagccagaccacactggatgaggtcttcatc
aacttcgccatgggaaagattggcatggagaccatacctttacaaagcgaagaagaagag
tgggatgatctggactgcaaggaggcagtagatgcatag
DBGET
integrated database retrieval system
