Hippoglossus stenolepis (Pacific halibut): 118120221
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Entry
118120221 CDS
T08308
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a
KO
K23619
collagen type XXVIII alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118120221 (col28a2a)
Peptidases and inhibitors [BR:
hsp01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
118120221 (col28a2a)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
PCC_BT
Motif
Other DBs
NCBI-GeneID:
118120221
NCBI-ProteinID:
XP_035030880
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Position
13:12657229..12673200
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AA seq
1237 aa
AA seq
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MFPSFTSVLLVTALTSVWAQDHYEERKTAKKSRGKPQPQTAANIHDGQAILDEDCSLELS
FLLDSSESAKDNHEQEKQFAMNVVDRLQGVRLQTGRSTSLRVALLQYSSHVITEQTFRDW
RGTENFKYRIAPIIYIGHGTYTTYAITNMTKIYLEESSPGSIKVAILLTDGISHPRNPDI
FSAVADAKNQGVKFFTLGITRSANDPANVAQLRLLASSPASQFLRNLQDEDIVNKIVTEI
TGLAEEGCPLAQRCACEKGERGPSGPAGKKGRSGDDGTSGFKGHKGEAGLSGLPGREGAE
GKLGLKGDKGEGGECGTPGIKGDRGLEGAFGPRGVRGPQGVPGPQGDIGPEGPQGKQGER
GPGGPPGIQGETGIGLAGPKGDMGFQGRPGPHGPQGVGEPGLPGPQGSQGVQGDKGPLGE
GFPGSKGDRGLPGPRGPRGQQGAGIKGERGELGPPGPLGPTGLTGVGIQGEKGIEGPRGP
PGGRGLTGEGLPGPKGDQGLPGEQGGPGERGIGEPGSKGELGAAGLGGLPGLPGEDGAPG
QKGETGLPGSRGLEGAQGIGTQGEKGDQGMRGIRGLHGPPGISGPSGPKGERGIPGQQGI
SGQPGRSISGSKGDQGPVGPHGPVGETGLGLPGPKGDRGHPGLPGPHGPKGEGLPGPGGP
PGLPGLQGELGPEGIGIPGPKGDVGFRGLPGLPGPAGEGLQGPPGNLGRSGPPGPIGTQG
EGIQGPKGMPGSQGMTGPRGPHGDGFPGPKGDRGLQGERGMKGLKGELGDSGVAGEAGKP
GTKGETGLTREDVIKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVTRLV
DRTTVGRNATRIGLVLYSLEVHLEFNLVRYMSKQDVKQAIRKMPYMGEGTYTGTAIRKAT
QEAFFSARLGVRKVAIVITDGQTDKREPVKLDLAVREAHAANIEMYALGIVNSSDPTQAE
FLQELNLIASDPDSEHMYLIDDFNTLPALESQLVNQFCEDENGAVFSNRIANGHRNGNNG
HGINGHNGHNGYNGHGNNGYVYGNNGHGNNGNTYNYQEEIQNQRRTNSRGRGDTFALPIS
ADPLPFQVVEDDDGEDLDIRAQVRGSSTVAVVNKTTVPGTSVIESSVPNEAVKSSSSSSS
SSATSSSTLSSVSSLNSNQLQPVVTPVLLEEAAIFVSRCNLSLNQGTCRAYIIRWYYDKQ
ANACAQFWYGGCGGNDNRYETEDECKETCVLSRTGDF
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgttcccctcctttacatcggtgctgctagtcactgcactgaccagtgtctgggcccag
gaccactatgaggagaggaaaactgctaagaaatccagaggcaaacctcaacctcaaacc
gctgcaaatattcatgatggacaagccatcctagacgaggactgtagcttggagctctcc
ttcctgttggacagctctgagagcgctaaggacaaccatgagcaggaaaagcagtttgcc
atgaacgtggtggacagactccaaggggttcgactgcaaaccggccgcagcacgagtttg
agggtggccctgttgcagtacagcagccatgtcatcacagagcaaaccttcagagactgg
aggggcacggagaacttcaagtaccggatcgctcccatcatctacatcgggcacggcacc
tacaccacctacgccatcaccaacatgaccaagatctacctggaggaatccagtcccggc
agcatcaaagtggccatcctcctcacagatggcatttcccacccaaggaaccctgacatc
ttctccgctgtcgctgacgccaagaaccagggtgtcaagttcttcaccctgggcatcacc
cggtcggccaatgacccagccaatgtagcccagctgcgtctgctcgccagctcccctgcc
tcccagttcctccgcaatttacaggacgaagacatagtcaacaaaatcgtcactgagatt
actggcttggctgaggaaggatgccctctggctcagagatgtgcttgcgagaaaggggag
agggggcccagtgggcctgcgggaaagaaaggccgatccggagatgatggaacctcgggg
tttaaagggcataagggtgaagcaggattgagtggactacctggacgagaaggtgctgag
gggaaattaggtctgaaaggagataagggtgaggggggagaatgtggcactccaggaatc
aaaggagacaggggtcttgaaggtgcatttggtccaagaggagtcagaggcccgcagggg
gtaccaggaccacaaggagacatcggaccagagggccctcagggaaagcagggtgaacgt
ggcccaggtggtcctccaggaattcaaggggaaactggtattggacttgctggaccaaaa
ggtgacatggggttccagggcaggccaggtcctcatggtcctcaaggagtgggtgaacct
ggacttcctggacctcaaggatctcaaggcgttcaaggggacaaaggacccctgggtgaa
gggttccctgggtcaaagggtgatcgggggcttccaggaccgagggggccaaggggacag
cagggtgcaggaatcaaaggagaaaggggtgaactggggcctccaggtcctctcgggcca
actggactgacaggagtcggcatacagggagaaaagggaatcgagggtccaagaggtcct
ccaggaggcagagggctaacaggagaaggtttacccggacctaagggagaccaaggttta
ccaggagagcagggaggtccaggagagagaggcatcggtgagcctggttcaaagggagag
cttggagcagctggtttgggtggactgcctggtcttcctggagaagatggagctccagga
cagaagggggagactggtttacctggttcaagaggtcttgagggagcacaaggaattggc
actcaaggggagaaaggtgaccagggtatgaggggtatccgtgggttacatggtcctcca
gggatttcaggaccctctggaccgaagggagaacgtggaataccaggtcagcagggcatc
tcaggtcagccaggacggtctatatctggttcaaagggtgatcaaggtcctgttgggccc
catggtcctgttggggaaacaggccttggactgcccggtccaaagggtgatcgtggtcat
ccaggtttaccgggtccacatggtccaaaaggagaaggccttcctggccctgggggtcct
ccaggcctgccaggcttacaaggagaactaggcccagagggaattggaattcctggtccc
aagggtgatgttggctttagaggattgccaggattgcctggtccagctggagagggctta
caaggaccaccgggtaatcttgggagatcaggaccccctggtccaattggaactcaaggc
gaaggcattcaaggtccaaagggaatgcctggatctcaaggtatgactgggccaagaggt
ccgcatggagacggttttcctggccctaagggtgatcgtggattacagggtgagagggga
atgaaaggtttgaaaggagagttgggagattctggagtcgctggtgaagcagggaagcca
ggaacaaaaggagaaacaggcctgacgagagaagacgttattaagctgatcaaggaaatc
tgtggatgtggcatcaagtgcaaggagaggcccatggagcttgtgtttgtcatcgacagc
tcagaaagtgtcggccccgagaactttgaaatcatcaaagactttgtcacacggctggtg
gaccgcaccacagttggtcgaaacgccaccagaatcggactggtcctttacagtctggag
gtccatttggaattcaacttggttcgctacatgagcaaacaggatgtcaagcaggcgatc
agaaaaatgccttacatgggtgagggcacctacactggcacggccatcagaaaagccact
caggaggcctttttcagcgctcggcttggagtccggaaagtggccatcgtcatcactgat
ggtcagaccgacaagcgagagcctgttaagcttgacctagctgtgagggaggctcatgct
gccaacatcgagatgtatgcactggggatcgtcaattcatctgatcctacgcaggccgag
ttcctgcaggaactcaacctcattgcctctgaccccgacagtgaacacatgtaccttatt
gatgacttcaacacactaccagcactggagtctcagctcgtcaatcagttctgtgaagat
gaaaacggcgcagtcttttccaatcgcattgcaaatggccacaggaacggcaacaatggg
catggtatcaatggacacaatggacacaatggatataatggccatggtaataatggttat
gtttatggaaacaatggacatgggaacaacgggaatacttataactaccaagaggagatt
caaaaccagagacgcaccaacagcagaggccgtggagacacttttgcgctgcccatcagt
gcggatcctctcccttttcaggtggtggaagatgatgatggtgaagatttagacatcaga
gcccaagtgcggggcagcagcactgtggctgttgttaacaaaacaacagtgcctggaact
tctgtgatagaaagctccgtccccaatgaagcagtcaaatcatcttcttcctcctcatcc
tcatcagcaacgtcttcttcaacgctgagttcagtttcatccttaaactctaatcaactg
cagccagtggtgaccccagtcctgcttgaagaggccgctatttttgtatcccgctgtaac
ctcagcctgaaccaaggtacctgccgagcctacattatccgctggtactatgacaagcag
gccaacgcctgtgcacagttttggtatggaggctgtggcggaaatgacaaccgttatgaa
acagaggacgaatgcaaggagacttgtgttctatccagaacaggtgacttttag
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