Hippoglossus stenolepis (Pacific halibut): 118120252
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Entry
118120252 CDS
T08308
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118120252 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118120252 (nup62l)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118120252 (nup62l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
118120252
NCBI-ProteinID:
XP_035030927
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All DBs
Position
13:complement(13040456..13042868)
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AA seq
569 aa
AA seq
DB search
MSGGFSFGPPTGGFAFGAQKPTAAAAPGPGFGMPSSTPVAPGGGFTFGPPAQPNANSAGG
FSFGTPAKSTAAVGVGFPFGTPTPNAFGLGATPQPTATAQAPGMTLGSAAAPVSMQGFNM
AGAMSAQTTAAPPAGGGFSFGTAPQAQPQLAAPAPAQAAPAQAAAAAAAAAAAAAAAAAA
SGGLSFGNFSFGATKVQATAAAPTLPTGGGFGFGTSAPSNLTMGMQPQPVSTTAAPTPQG
GAFGFGIKPSSTPAPPALTQPAPAVGPTLFSMPFTTVAASAPAAAAPAAGFMQSAAPTSA
ASTAPAITTAASGGMSFMLKPLGAATATLAAAPASTAAATTGAAVAFSLGLKPASGISTI
TTATTLTTTTAPPVMSYAQLEGLINKWSLELEDQERHFLQQATQVNAWDRMLVENGEKIT
SLHKEMEKVKLDQRRLNQELDFILSQQKELEDVLCPLEESVKEQSGTIYMQNADEERERT
YKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTSDPLQQICKILNAHMDSLQWIDQNSV
LLHRRVEEVSKLCDNQRKEQEKTFRLTFD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagggtttagcttcgggccgcccactggaggcttcgctttcggggctcagaag
cccacagctgccgccgcccccggtccgggcttcgggatgccaagctccacacctgtagcc
cctggagggggcttcaccttcggcccccccgcccagcccaacgccaacagtgccggcggt
tttagtttcggcaccccagcaaagagcacagcggccgtgggtgtaggatttccttttggg
acccccacccccaacgcgtttggtctcggcgcgactcctcaacccacagccacagcgcaa
gcaccggggatgaccctaggctccgcggcagctccagtttcgatgcaagggttcaatatg
gccggcgcgatgtccgcacagaccaccgctgcccccccagcaggaggcggcttctccttc
gggactgctcctcaggctcaaccccaacttgctgcaccagctccagcccaagcagctcca
gcccaagcagcagcagcagcagcagccgcagccgccgccgctgcagctgcagcagcagca
tcaggtggcctctcgtttggaaacttcagctttggagctacaaaggtccaggcgaccgca
gcagcccccactctccccacaggaggaggcttcggctttggcaccagtgctccctccaac
ctcaccatgggcatgcagccccagccagtctccaccactgcagccccaacacctcagggt
ggagcgtttggctttgggatcaaaccttcatcaaccccagctcctcctgctttaacacag
ccagccccagccgtaggtcccactctcttttcaatgcccttcactacagttgctgcttct
gctcctgctgctgctgcaccagcagctggctttatgcagagtgcagctccaacttcagca
gcaagcactgctcctgcaataaccacagcagctagtggaggtatgtcttttatgctcaaa
cctctgggggcagctactgccaccttggccgctgctcctgcctctactgcagctgccaca
acaggtgctgcagtagcctttagcctgggactcaaacctgcatctggcataagcaccata
acaacagccacaacactcaccacaaccacagctcctccggtgatgagctacgcccaactg
gagggtctcattaacaagtggagtctcgaactagaggaccaagagagacatttcttacag
caggccactcaggtgaacgcctgggaccgaatgcttgtggagaacggggagaagatcaca
tccctgcacaaggagatggagaaggtaaagcttgaccagaggaggctgaaccaggaactg
gacttcatcctgtcccagcagaaggagctggaggacgtgctgtgcccactcgaggagtct
gtgaaagagcagagcggaaccatctatatgcagaacgccgacgaggagcgcgaaagaacg
tacaagctcgcagagaacgtggacgcccagctgaagaggatgtcgcaggacctgaaggag
atcatcgagcacctcaacacatccagcggccctgccgacaccagtgatccacttcagcag
atctgtaaaattctcaacgcccacatggattctcttcagtggatcgatcagaattcggtg
ctcctgcacagacgagtggaggaagtgtccaaactgtgcgataaccagcgcaaggagcag
gagaaaacctttcgtttaacgtttgactga
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