Hippoglossus stenolepis (Pacific halibut): 118120401
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Entry
118120401 CDS
T08308
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X2
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118120401
Membrane trafficking [BR:
hsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118120401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
FlgD_ig
CRAL_TRIO
PH_10
hSH3
DP
Motif
Other DBs
NCBI-GeneID:
118120401
NCBI-ProteinID:
XP_035031155
LinkDB
All DBs
Position
13:16976706..17009531
Genome browser
AA seq
1199 aa
AA seq
DB search
MSLHEFLREGGEASHRLMNRLSHLIQNLDISGLGTSFPFSPASRKNSWSYWDDEIMELDS
SPLHAVDITPDLKKQFAFLSGGRGDHGSPIIVFPEFPAFGDITDRVFHNVLTYLTSVPSL
LSTGVGFILVIDRRQDRWAAVKGTLLRIAGSFPGNLQLVLVLRPTALLQRTLSDILFKFN
KDEFKMKVPVIMLSSVTELHSYIDRSQLTNELGGTQEYCHEKWISHRTAIEDFALTVKKT
AQTLQSFGTELAETELPNEIQATIVLLSTHTNKKDKMKEDLLVALGQGRRLLESINEPVA
RDPDHNMNQDELENLATVQRLLSQLDETERAFDEFWVRHHTKLEQCLKLRHFEHNYKEVR
ALLDQVSEKLAAFSEVGISPAHDEHIVCELTSYEEKVCEVLDRASALSREGDELIENSHY
AEDSIQPKCSELRAISESVSSSLRAKKDHFLKAMELHHCLQRASKWVDDGIYLLASQPVD
KCQSHEGAELALQELERYLENAGLNQLTDLETIWKEYDAVLNQQFKDQVERISQKQASMQ
EMFDKRRVSLKKLAAKQTRPVQPVAPRPEAFIKSPLSSPAHRAQQEKNSSETDTGNNCEK
GNGQLQNGDSNSRHASLSEEEENLAVLRRHVMNELLETERAYVEELLCVLQGYASEMDNP
AMCVLIPAPLQNKKEVLFGNMPEIYHFHKRTFLRELEQYTDCPELVGRCFIERMTDLQIY
EKYCHNKPRSESLWRQCSDCAFFQECQKKLEHKLGLDSYLLKPVQRITKYQLLLKEMLKY
SKGCEGTDDLQEALTSILGILKAVNDSMHLIAITGYEGNLSELGKLLMQGSFSVWTEHKK
GHAKVKDLARFKPMQRHLFLHQKTLLFCKRREENGEGYEKAPSYSFKQSLNMSAVGITEN
AKGDNKKFEIWCNSRDEVYIVQAPTTEVKTTWVNEIRKVLTTQLEACREASQQKAPDQVV
QSTPASSGTISHSPFKTSQRSFKKGEEKKAEPCSPDVNSSSSSSSPKPTGKDEAATSPTS
DRAAAAKKRFTLQGFSNLKAQKGSPTSLDHKTKRQSDPTPFGFKGWNKASLSLDASEEND
GYSSAEEPLNSDPEDDSGKKLSAGKYTVTVDYENGGTQELPVKSGDMVELVKEGDDGQWF
VRNLSTSKEGWIASANLITLIRKSKSCQSLTSSEGSGSGNISTSSSCSETYASFSDIKP
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcatgagtttctgcgggagggtggtgaggcgtcgcaccggctcatgaaccgg
ctcagtcatctcatccagaacttggacatctctggactgggcacttcttttccttttagc
cctgccagcaggaagaactcctggagctactgggatgatgaaatcatggagctggacagc
agccctctccacgctgtcgacatcacccctgacctcaagaagcagttcgccttcctctca
gggggtagaggagatcatggcagcccaatcattgtgttcccagaattccctgcatttgga
gacatcacagatagagtgtttcacaacgtgctgacctacctgacaagtgttcccagtttg
ttatcgacaggcgtgggtttcatcctggtcattgatcgccggcaagacagatgggcagct
gttaaggggaccctgcttcgtattgcaggctccttcccagggaacctccagctggttctg
gttctgaggcccactgccctcctgcagcgcacgctgtccgacatcctcttcaagttcaac
aaggatgagttcaagatgaaggtgccggtgatcatgctgagctcagtaactgagctgcac
tcctacatcgaccgctcccagctgaccaatgaactcgggggaacgcaggagtactgccat
gagaagtggatctctcaccgcactgctattgaagactttgcgctcacggtaaagaaaacg
gcacagaccctgcagtcatttgggacggagctggccgaaactgaactccccaacgagatc
caggccacaatcgtcctgctcagcactcacaccaacaagaaagacaaaatgaaggaggat
ctgctggtggctctgggtcagggcagaaggctgttggagagcatcaatgaacctgtagca
cgagaccccgaccacaacatgaaccaggatgagctggagaatttagccactgtacaaaga
ctgctgtctcagctggatgagacagaaagggctttcgatgagttctgggtgcgacatcac
accaaattggagcagtgtctcaaactgcgccactttgagcacaactacaaagaggtgagg
gctctgctggatcaggtgtctgagaaacttgcagccttctctgaggtcggaatcagccca
gctcacgatgagcacatcgtctgtgaactcacaagttatgaggagaaagtctgtgaggtg
ctggaccgagcctcagctttgtctcgtgagggcgacgaactcatcgagaactcacactat
gctgaagactccattcagcccaaatgcagcgagctcagagcaatcagtgagagcgtgagc
agcagcctgagggccaagaaggatcatttcctcaaagccatggagctgcatcactgtttg
cagagggcctctaaatgggttgatgacggtatatacctgctggcgtctcagccggtcgac
aagtgtcagtcacacgagggggctgagttagcgctgcaggagctggagcgttatctggaa
aacgcaggcctgaaccagctgacagacctggaaaccatctggaaggaatatgatgctgtg
ctcaaccagcagttcaaggaccaagtggagaggatttcccagaagcaggcgtccatgcag
gagatgtttgacaagaggagggtgagcctgaagaagctcgcagccaaacaaaccaggccg
gtgcagccggtagctcccagaccggaggccttcatcaaatcccctctcagctcacctgct
cacagagcacagcaggagaaaaactcctcagagacagacactgggaacaactgtgagaaa
ggaaatggccaactgcagaacggagacagtaacagccgacatgcctcgctgtccgaggag
gaggagaacctggcggttctcaggaggcatgttatgaacgagctgctggaaactgagaga
gcctatgtggaggagctgctctgtgtgttgcagggatatgcctcagagatggataatccc
gccatgtgcgtcctcatccccgctccgctgcagaacaaaaaggaggttctgtttggcaac
atgcctgaaatttaccacttccacaagaggacttttctgcgggagctggagcagtacacc
gactgccctgagctggttggaaggtgttttatagagaggatgacagatctgcagatctat
gagaagtactgtcacaacaagcctcgctctgaaagcctctggaggcagtgctcagactgt
gccttcttccaggagtgtcagaaaaagctggagcataaactgggtttagattcttatctg
ctgaagccggttcagaggattaccaaatatcagctactcctgaaggaaatgctgaagtac
agtaagggctgtgaggggacagatgacctgcaggaggcgctgacctccatcctgggcatc
ctgaaggccgtcaatgactccatgcacctcatcgccatcaccggatatgagggtaacctg
agtgagctggggaagctgctgatgcaggggtcgttcagcgtgtggacggagcacaagaaa
ggtcacgccaaggtcaaggatctggcccgtttcaagcccatgcagcggcacctgttcctc
caccagaaaaccctgctcttctgcaagaggagggaggagaatggagagggctatgagaaa
gctccgtcgtacagcttcaaacagtctctgaatatgagcgctgtgggcatcactgagaat
gcaaagggagacaacaagaagtttgaaatctggtgcaactcaagagatgaggtttatatt
gttcaggcaccaacaactgaagtaaaaaccacttgggtgaatgagatcaggaaggttctg
acaacacagctggaggcgtgcagagaagccagccaacagaaggcaccagatcaggttgtc
cagtccactcctgcatctagtggaacaataagtcacagtccgttcaagacgagtcagagg
agctttaagaagggagaggagaagaaagctgagccctgcagccctgacgtcaactcctcc
tcctcctcctcctcaccaaagcccacaggaaaagacgaggctgcgacaagcccgacctca
gacagagctgctgcggctaaaaagcgctttactttgcaaggtttcagtaacctcaaagct
cagaaaggatccccgacgagccttgaccacaagacaaaacgccagagtgacccgacgcca
tttggcttcaaaggctggaacaaagcttccctgtcattggatgcctccgaggagaatgac
ggatattccagcgccgaggaacctcttaactctgacccagaggacgacagcggcaagaag
ctgagtgctgggaaatacacggtgacggtcgactacgagaacggcggcactcaagagctc
ccagtgaagagtggagacatggtggagctggtcaaagagggagatgacggacagtggttt
gttcgtaatctgagcacctctaaggagggatggatcgcttctgctaatcttatcaccctc
atcagaaagtccaagtcttgtcagtctctcaccagctcggaaggcagcggctctggaaac
atcagcacgtcgtccagctgcagcgagacctacgcaagcttctctgacatcaaaccctga
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