Hippoglossus stenolepis (Pacific halibut): 118120412
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Entry
118120412 CDS
T08308
Symbol
dcaf6
Name
(RefSeq) DDB1- and CUL4-associated factor 6 isoform X1
KO
K11795
DDB1- and CUL4-associated factor 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118120412 (dcaf6)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118120412 (dcaf6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
118120412
NCBI-ProteinID:
XP_035031184
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Position
13:complement(16211191..16231249)
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AA seq
1006 aa
AA seq
DB search
MVTMSCSGNLVWDVNKRLIGYNEPNTIRTNYLGRREFVQRLKLEATLNVHDGCVNTISWN
DTGEYILSGSDDTFLVITNPYNKKVKKSIRSGHRANIFSAKFMPHTNDQEIISCSGDGII
YYTHIEKSPEFNRQCQFTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDLRTKTSCNKE
DCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYMGRGTTGM
CVRFVPAHLSNKSCRVTSLCYSEDGQEVLVSYSSDYIYLFNPKDDQARELKGPSEERREE
LRQPPVKRLRLRGDWSDTGPRARPESERERDGEQSPNVSLMQRMSDMLSRWFEEASEAQS
SRGTRPQTRPRGTAVRPEASSNPPAAPAGDSSQSSSAPERPVTTDTSVEPAAPAAATPDA
PAAATATATATVAATTAATAAATATATAAPMPKSTSSSSSGSSSTVTAPPPSSSTSVESS
APSTSPLTSSPDSEQRSQADATRTPTPAAASTSEAALSEYGPHRLPISLVCRRLQRLLRL
ADPPGRGQRAGPSSSSAERARQSQRAATSAAAAAETPPRTDSPSSVVNKQLGSMTLDEQQ
GGAEPAASPPGESVSALVSSSSSSSSSAPTSSTSTGTSRPSAAEPVLSLHYSSEGTTTST
IKLDFTDEWSSTSGTMGSGAHKTSEVVQSRASVSTESSASGQIPSEPSRQQSLPAASAEP
PCDASCSSTAPAAAEGSSQGGSAERSQPEGAEDTSGGCRRAEPTGESQCGPLPSEWEGQS
QPARGNQDSDDSDDDPILIPSTRLRGQGQRLSTRGSAVGDRMIRRSAAARIQELFRRRKE
RREMEESETQNIRRPSVKMVYKGHRNSRTMIKESCFWGNNFVMSGSDCGHIFIWDRHTAE
HLMLLEADNHVVNCLQPHPFDPILASSGIDYDIKVWSPLEVSPSFNRVLANEVITRNELM
LEETRNTITVPASFMLRMLASLNHIRSDRQEGDRSEGSGQENEEEQ
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgatgtcctgctctgggaacctggtctgggatgtaaataaacgcctgattgga
tacaacgagcccaacaccatcaggaccaactacttaggtagaagagaatttgtccagagg
cttaaacttgaagcgacactgaatgtacacgatggctgtgtcaacacgatatcctggaac
gacacaggcgaatacatcctgtcgggatcagacgacacatttttggttattacgaaccca
tacaacaagaaggttaagaaatccatacgttcaggtcatcgggcaaacatcttcagtgcg
aagttcatgccgcacaccaacgatcaggagatcatctcctgctcgggagatggcatcatc
tactacacccacattgagaagagtcctgagttcaacagacaatgccagttcacctgtcac
tatgggacagcttatgagattatgacggtaccaaatgacccctacacgtttctgtcatgc
ggggaggacggcacggtgcgatggttcgatcttcgcacgaagacgagctgcaataaagaa
gactgcaaagatgacatcctgattaactgtcggagggcagcgacctctatatccatctct
ccactggtgccatattatctggccgtgggctgctccgacagctcagtgcgaatctacgac
agacgcatgctgggaaccagagcgacaggtaactacatgggccgggggacgacgggcatg
tgcgttcgttttgttcccgctcacttgtccaacaagtcgtgccgggtgacgtctctctgc
tacagcgaggacgggcaggaggtgctggtcagctattcctccgattacatctacctgttc
aatcccaaagatgaccaggcccgggagctgaagggcccgtccgaggagaggagggaggag
ctgaggcagcctccagtgaaacgcctccgactacgaggggactggtctgacactggaccc
cgagctcgcccggagagtgagagggagagagacggtgagcagagcccaaacgtatctctg
atgcagaggatgtcggacatgttgtctcgttggtttgaggaggccagcgaggctcagagc
agcagagggacgcgaccacagacacggcccagaggaacagccgtccgtcccgaggcctcg
tcaaatcctccagctgcccctgcaggagactccagtcagagctccagtgcccccgagagg
cctgtgacgacagacacttcagtggaacctgctgctcctgccgctgccacccccgatgct
cctgccgctgccaccgccaccgccaccgccactgtcgctgccaccactgctgccaccgcc
gctgccaccgccaccgccactgctgcccccatgcctaagtccacctcctcttcctcctca
gggtcttcatcaacagtcacagcacctcctccttccagctccacgtcagtggagagttcg
gccccttccacctcccccctcacctcctcccctgactcagagcagaggagtcaggcagat
gcgaccaggacccccacgccggcggccgcatccacctcagaagctgcactctcagagtac
ggtccccaccggcttcccataagtttagtgtgtaggcgtttgcagaggttacttcggctg
gccgaccccccgggacgcggtcagcgggcggggccatcttcttcctctgcagagagagcg
agacagtcacaaagagctgctacctctgctgctgccgctgctgagacgccaccccgtaca
gattccccctcgtctgtggttaacaaacagctgggatccatgactcttgatgaacagcag
ggaggagcagaacctgcagcttcacctcctggtgaatctgtatctgcactagtcagcagc
agcagcagtagcagcagcagcgctccaacctcctccacctcgactggcaccagtcgaccc
agtgcagcagagccggtccttagcctacattacagctcagagggaaccaccaccagcacc
atcaagctggacttcactgatgagtggagcagcacttctggcactatgggcagcggagct
cacaaaacatctgaggttgtacagagcagagcgagtgtgtcgacggagagttcagcatca
gggcaaattccctctgagccctcgaggcagcagagtttgccggccgcctctgcagagcca
ccgtgtgacgcctcctgcagctcgacggctccagccgcggcagagggctcctctcagggg
ggcagcgcggagagaagtcagccggagggtgcggaggacacatccggaggctgcaggagg
gcggagcccaccggggagagccaatgcggcccgctcccatcagagtgggagggccagagt
cagcccgcacggggcaaccaggactctgatgacagcgatgacgatcccatcctcatccca
tcaacgaggctcagaggacagggacagagacttagtaccagaggatctgcagtaggagat
aggatgatcagacgctcggcggcagctcgcatccaggagctgtttcgcaggaggaaagaa
agaagggagatggaggagagcgagacccagaacatcaggagaccctcggtcaagatggtc
tacaagggccaccgcaactccaggacaatgataaaggagtcgtgtttctggggcaacaac
tttgtgatgagcggctccgactgcggccacatcttcatctgggacagacacaccgcagag
cacctgatgctgctcgaggccgacaaccacgtggtcaactgcctgcagccgcaccccttt
gaccccattctcgcttcttcagggatagactacgacatcaaggtttggtcgccgctggaa
gtttcgccatcattcaacagagtcctcgctaatgaggtcataactcggaacgagctgatg
ttagaagaaacgagaaacacaatcacagtcccggcctctttcatgttacggatgttggcc
tccctgaaccacatcagatcagatcgacaagagggcgaccgctctgaaggttcgggtcag
gaaaatgaggaagagcagtag
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