Hippoglossus stenolepis (Pacific halibut): 118120438
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Entry
118120438 CDS
T08308
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
hsp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118120438 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118120438 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118120438 (ranbp2)
03110 Chaperones and folding catalysts [BR:
hsp03110
]
118120438 (ranbp2)
04121 Ubiquitin system [BR:
hsp04121
]
118120438 (ranbp2)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118120438 (ranbp2)
Chaperones and folding catalysts [BR:
hsp03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
118120438 (ranbp2)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118120438 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_14
TPR_1
TPR_16
TPR_2
TPR_8
TPR_7
ARM_TT21_C
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
118120438
NCBI-ProteinID:
XP_035031254
LinkDB
All DBs
Position
13:complement(8416562..8437623)
Genome browser
AA seq
3081 aa
AA seq
DB search
MRRSKAEVDRYVSSAQSSSPSLKEKPTKGFLFAKLYFEAKEYELAKRHVSEYLKVQQRDP
KAHKFLGHLYEREGDIGKAVGCYKRSVDLNPAQGDLVLKVAELLVSQEEFDGKAEFWVDK
AAKMLLPGNPAVFNLKERLLSRQGQQGWNRLFDLLQAELAARPGDAHVNVKLVQLFCQDG
RLDEAVKHCLAAENRGLLSHSLDWYTVVVRTLQEYLAQPSVSSNEKSCRRLQKELLLAHC
NLLRITLSESSVQPSCDALKSFDQAMQTLSSIAGCHADDLCEVFVEMRGHLYLHAATLLV
KLAQDRQQTWRDVIDMAALCYLLAYQVSRPKPKMTKRDQPAPPLLELLANDRQSQAGHML
LNLSTDLSNLIREVVEVFGNRSGQDSLFELLFGTQASTGSSFIANDDIRTTNTMVPELSQ
LAKWDTGSILLHGGDLQHLSWLGLQWTLLAQRPALRDWLAQLFPRLTLETSKLDTNAPES
ICLLDLEVFLYGVVFCSHCQFQETAKISSSLNQQQQQQLYEPRCLPLPLLRLLTTDRQRE
WWDALNSLIHKQTATGMSGKRRMIVQHGLSTLRAGEKHGLQPALAIHWAQCLSQTANMTV
NSYYDQTDYIGRSVHYWKVALPLLEKIKNRRGIPEPLDPLFMHFPSKDIQISSVKGYEEE
FKIAYAALLEIEGRTEEAIATLETINNMSSFWHLAQIYQRLSEEASNGVEETQDRCITFL
RKFRTYLSKIYNANADDIEKLPVSMEEVVDLLNDVNQQLGESGEAIDEEEEKEEGQRGPA
HSSPAHPIETSATISHIKFSSPSPNKSIVSPAKRLISPKTQPHWVEDQKSLLQMLCQQVE
ALKNEVHDLRHNSSGNAGSPRHKMYGESYGAEGVQDSFTPVQSYHGAPLTVATTTPSAYY
NQSPAYNSQYLLRTAVNVTPTKGPVYGMNRMPPQQHMYAYQPPTHTPPLQTAPPCIYPPQ
EQVFGAPLRFESPATSLLSPYSEEYYGQSVTQQTTNPPLPEPGYFTKPSVVPVQPPKSID
GKPMDFGKLSFSQQAPAEAPKVPSFGAGAVAQSTHSSSFKFNSNFKSNDGDFTFSASQAK
HSESLLGLLTSDIPTKTDAVPEKLSAQEQPTSQTGIFTFGTKSPTSFSFVDSAESTDTAS
LFGKVDQPFKFGDSDTAKPVFGLSSYTPEAEKAAESDNESTHVEEDEDGPHFEPIVPLPD
KVDVKTGEEEEEEMFCNRAKLYRFDTETKEWKERGIGNVKILKHSTKGKVRLLMRREQVL
KICANHYINADMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTADEASLFRAKFEE
AQKIVLESPEEQSQVEEKEESIKDSQSLAAQFALKQGEWECDACYVRNKPTDVRCVACQT
ANPNSSSKPDIQAAGDTKPSPFSFKFGTDSSKPSSSGSTFSGFGAFGASIPSSFTFGTSS
LKPADTVTSAFGSGFVAPFGKKPGQWDCDKCSVRNEANSDTCVSCNALKASAKTTATAET
TPPADAPEVEPSTCSVGSGFGAQFGKKPGQWDCDICAVRNEASANKCVACYSPNPAAKST
EGPPEASHLPAVSGFGSGFEKKDEQWDCDVCLVRNDASANECVSCHAPNETPSLEAMFAR
KDDEWDCDICLVRNNGSANKCVACQTPNPNAKSTSSAAPTASSFSFAFGSKSSSSQPPAT
GFKLPFGAGSTFQFGHNKDKSSADSFKFETPQSGSSSTSASGFSFSMPNAGGGFKFGIQD
TASTDDPTPPSGSASSFLKSIADKHNEKQDVSTPSEDQTEQDQNPLITGKPNTFSFSDLA
QSSGSDFQLSEKDTEFKGFSGAGEQMFSSLQATPTKTVASHEVEDDDMYKTEENDDIQFE
PVVQMPDKVDLVTGEEDELVLYSQRVKLFRFDTSTNTSQWKERGVGILKFLKNTTNGRLR
VLMRREQVLKVCANHWITTTMNLKPLAGSDKAWMWLANDFAEGDARLEQLAAKFKTTELA
EEFKVKFDECQRLLLDIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKFFLTDEKTKIK
DDDKQGDITSSNVSSLVIKGHGETTGPTLEWDNYDLREDALDDTADTSVYASPITSSPLR
KNLFRFGESTSGFSFSFQPGISPSKSPAKPNQSRTSEGTDDEQDVTQDEERDGQYFEPVV
PLPDLVDISTGEENEQVVFSHRAKLYRYDKELGQWKERGIGDLKILQNFTTKQVRLIMRR
DQVLKICANHWISAAMKLEPMKGAEKAWVWSAMDFAEEGEGTIEQLAVRFKLQDTANAFK
QVFEDAKVAQENEELMTPVTSVVPTSPDTASAGSTKTATAVCGKAAIAVLEETTKERTEL
FPDIKPCSPSSPGPGNSSKTVVSPPKFVFGTDSLQKIFGSPRSPSEGEESASGLKAKDAG
HPSPASPAFKVPEKGLDFRLFKDNPMAFWTSTSTTQFEPPGPSQAEEGGAGSDEDSEVEI
LYVREPTAEQAALARELLLPLTFFCYQNEPGYVSDDQTDDEDFESAVKALNGKLYPDAPE
KGASACSDALILSVPPSEPDCQVVWEKKPTPQEEEKAKSLLLPPTFFCGLSTTDSDTDHD
KTEDFETEVRKAQRELDAQLNTGAEAPSSSAVAPEEQTPAPSSSSSDTAGNTSTPQEPTP
EQPVETCSQVPSSSISSSSCPIDLSTKKSSEPESNTEATVSTTSTTTGQDLSSFGFKDVS
GFSFADLAQTTEGYSFGSTDSNFSWANAGATVFGCAVPSAPKNTGEEGGTDDESSNNVDI
HFEPIVSLPEVETKSGEEDEEILFKERAKLYRWDRDLSQWKERGVGDLKILFHPSKHFYR
ILMRREQVLRVCANHNITEVMELKPMNASANSLIWTATDYSDGDGEVEQLAAKFKTPEIA
ESFKKTFCECQNRIGQSGSDDSSVLSPQMSRIQEHSRDSNPQVFFKVSAGDQTLGTITIE
LFSHIVPKTAENFKVLCTGEKGFGLRNSVFHRVIPDFMCQGGDITKGDGTGGKSIYGSKF
EDENFDVRHTGPGILSMANCGRDTNNSQFFITLKKAEHLDFKHVVFGWVRDGMDVVQQMG
ELGTKGGVPTKKLVITDCGQL
NT seq
9246 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagtaaggctgaagtggaccggtacgtctcctccgcgcagagttcctctccc
tcgctcaaagagaagccaaccaaggggtttctatttgctaaattgtactttgaggcaaag
gaatatgagcttgctaaaagacatgtgtcagaatatctcaaagtccagcagagggatcct
aaagcacacaaattccttggacatctctacgagagagagggagacatcggcaaggctgta
ggatgttacaagcggtcggtggacttgaaccctgcccagggggacctggtgttgaaggtg
gctgagttactggtcagtcaggaggaatttgacggcaaagcagaattctgggtggacaaa
gctgccaagatgctgctgccaggaaaccctgctgtcttcaacctgaaggagcgcctgttg
agtcgtcagggtcagcagggttggaaccggctgtttgacctcctccaggctgagctggca
gcgaggccaggtgatgcacatgtgaacgtgaagctggttcagctcttctgtcaggatggt
cgactggatgaagccgtcaagcattgcctcgctgctgagaacaggggcttgctaagccac
agtctggactggtacacagtggtggtgcgcacactgcaggaatatttggctcagcccagt
gtttctagtaatgaaaagtcgtgtcggcgactccagaaggagctgctattggcccactgc
aacctgctgagaatcacactgtctgagagcagtgtgcagcccagctgtgacgcactcaag
agttttgatcaagctatgcagacactgagcagcattgcgggctgccacgcagatgatctt
tgtgaggtgtttgtggagatgagaggtcacctctaccttcatgctgcaacactgctggtg
aagctggcacaggaccgccagcagacctggagggatgtcattgacatggctgcactgtgc
tacctgctagcataccaggtctccagaccaaagcctaaaatgaccaaaagagaccagcca
gccccaccgcttctagagctgctggccaacgatcgacagagtcaggctggacacatgttg
ctcaatctgagcactgatttatccaacttaatcagagaggtggttgaggtatttggaaac
cgcagtggtcaggattcgctgttcgaattgctatttggaacccaggcctccactggatct
tcatttattgccaatgatgacattcgtaccaccaacaccatggttccagagctctctcaa
ctggccaaatgggacactggctccatccttctacatggtggtgacctgcaacatctgagc
tggttggggctacagtggactcttttggcccaaagaccagcactgagagattggctagcg
cagctctttccgaggttaaccctggaaacctccaaactggacacaaatgcaccagagtcc
atctgcctactggacctggaggtgtttttatatggtgtggtgttctgtagccactgtcaa
ttccaggaaacagcgaaaatcagcagttcattgaaccagcagcaacaacagcagctctat
gagccgcgctgcctcccacttcctctccttcgcctcctgaccactgacagacagagggag
tggtgggacgccctcaacagccttattcataaacagacagccaccggcatgtctggcaag
cggcgaatgattgtgcaacatggactgagcactctgagagccggagagaaacatgggctt
caaccagcactggccatccactgggcacagtgtctcagccagacggctaatatgactgtg
aactcgtactatgaccaaacggactacattggtcggagtgtgcactactggaaagtcgcc
ctcccactgttggaaaagatcaaaaacagacgtggcatacccgaacccctcgaccccctc
ttcatgcactttccctctaaagatattcagatttcttctgtgaagggttatgaagaggaa
ttcaagatagcgtacgcagctcttcttgagattgagggcaggacagaggaggccattgct
accttggaaaccatcaataacatgtcatccttctggcatttggctcagatctaccagcgg
ctctcagaggaggccagcaatggggttgaggagacccaagacaggtgcatcactttcctg
agaaagttcaggacctacctgtctaagatctacaatgccaatgccgacgacattgagaag
ctgcctgtgtccatggaggaagttgtggacctcctgaatgatgtgaaccaacagctgggg
gagagtggagaggccatagatgaagaggaggagaaagaggagggtcagagaggaccagcg
cactctagtcctgctcatcccatagaaaccagtgccacaatatcccacattaagttttcc
agtccttctccaaacaaaagcatagtctctcctgccaaaagactgatttctcccaagacg
caacctcattgggtggaggaccagaaaagtctccttcagatgctgtgtcagcaagttgaa
gccctcaagaatgaagttcatgatctaaggcacaactcttcagggaatgcaggctctcct
cgtcataagatgtatggggagagctatggggctgagggcgttcaggattcttttacccca
gtccagtcgtaccatggtgcccccctaacagttgccaccacaaccccctctgcgtactac
aaccagtctccagcttataactctcagtatctcctgcgcactgcagtaaatgtaaccccc
accaagggcccagtgtacggtatgaaccgtatgccacctcagcagcatatgtatgcttac
cagccgcccactcacacacctccattgcaaacagccccaccctgcatttaccctcctcaa
gaacaagtctttggtgcccctctgcgatttgaatcgccagccacaagccttctttcacca
tacagtgaagaatactatggccagagtgtaacccaacaaaccactaaccctcctctgcct
gaacctggctacttcaccaaaccatctgtagtccccgttcagccaccaaagagcatagac
gggaaacctatggactttgggaagctgtccttcagccaacaggcgcctgctgaagccccc
aaagtgcctagttttggagcaggggcagttgcccagtcaacacattcatcttcgttcaaa
ttcaactccaactttaaatccaacgatggcgatttcactttctctgcttctcaggctaag
cacagtgaaagtctgcttggtctccttacatctgacattcccactaaaacggatgctgtt
ccagagaagctttccgctcaggagcagcctactagccaaacaggcattttcaccttcggc
accaaaagtccgactagcttttcctttgtcgattctgcagagagtaccgacactgcaagt
ctgtttggaaaagtggaccagccgtttaaatttggggattctgacaccgccaagccagtg
tttgggttatccagttacacaccagaggcagaaaaagcagcagagagtgacaatgagagc
actcatgttgaggaggatgaggatggccctcattttgaacccattgtacctcttcctgat
aaagtagatgtgaaaacgggtgaggaagaggaggaggagatgttttgtaacagggcaaag
ctgtatcgctttgacacggagacaaaagagtggaaggagcgaggtattggcaatgttaaa
atcctaaaacacagcactaaggggaaagtccgcctcttaatgagaagggaacaggtcctc
aagatctgtgccaatcactacatcaatgctgatatgctactaaaaccgaatgcaggctct
gacaaatcctgggtctggaatgccattgattatgcagatgaagagcctaagccagaacag
ctggccatccgctttaaaacagcagatgaggcatcacttttcagagccaagtttgaggaa
gcccagaaaattgtccttgaatcaccagaagagcaaagtcaagtggaggagaaagaggag
agcatcaaagattctcaatcactggcagcccaatttgcacttaaacaaggtgaatgggaa
tgcgatgcgtgctatgtaagaaataaacccacagacgtgcggtgtgttgcatgtcaaacc
gccaatcccaattcttcatcaaaaccagacattcaggctgctggtgacaccaaaccgagt
ccatttagtttcaaatttgggacagattcatcaaaacccagtagttctggctctacattt
tctggatttggtgcttttggagcttctataccctcttcatttacctttgggaccagttcc
ttaaaacctgctgacacagtaacaagtgcgtttggttctggctttgtagctccgtttgga
aagaagccggggcagtgggactgcgacaaatgttctgtaagaaatgaggccaattcagac
acttgtgtttcttgtaatgctctaaaagcctcagctaaaacaactgctacagcagaaacc
acaccacctgcagatgcacctgaagtggagccctctacatgttctgtgggctctgggttt
ggtgcccagtttgggaagaagcctgggcagtgggattgtgatatatgcgcagtaagaaat
gaagcctctgctaacaaatgtgtagcttgttatagcccaaatcctgctgctaaatcaaca
gaggggcctccagaagcatcacatctgccagcagtgtcaggttttgggtctggttttgaa
aagaaggatgaacagtgggactgcgatgtctgcctggtcagaaatgatgcatcagctaat
gaatgtgtttcatgccacgccccaaatgaaacgccctctttagaagccatgtttgccagg
aaggatgacgaatgggactgcgacatttgtctagtgagaaacaatggctctgccaataag
tgtgtggcttgtcagacaccaaaccccaacgctaaaagcacaagcagtgctgctcccaca
gcctccagcttcagctttgcctttggatccaagagttcatcaagtcagccacctgcaact
ggattcaaactgccgtttggagctggcagcactttccagtttggccacaacaaagataaa
agctctgcagattctttcaagtttgaaactcctcagtctggatctagtagcacaagtgct
tcaggcttctctttctcaatgcctaatgcaggtggtggcttcaagtttggcattcaggat
actgcctcaactgatgatccaacacctccatctgggtcagcatctagctttcttaaaagc
atagctgacaaacataatgagaaacaagatgtgtctacaccttcagaggaccaaacggaa
caagaccaaaatccattaattactggaaaacccaatacattcagtttttctgacctggca
cagtcctctggatcagacttccagttaagcgagaaagacacagaatttaaaggtttctct
ggggccggtgagcagatgttctcatcgttacaggcaacccctactaagacggttgcctct
catgaagtggaggatgacgacatgtataaaacagaggaaaatgacgatattcagtttgaa
ccagtggttcagatgcctgataaggtggatctggtgacaggggaggaagatgaactggtt
ctttactctcagcgtgtcaaactgttcagatttgacaccagcaccaacaccagtcagtgg
aaagagcgcggtgtagggatactcaaattcctgaaaaacaccacaaatggcagactcagg
gtgctcatgagaagagagcaggtgctgaaggtgtgcgccaaccactggatcaccaccacc
atgaatcttaagcccttggcagggtcagataaagcatggatgtggctggccaatgacttt
gctgagggagatgctagacttgaacagttagctgccaagtttaaaaccacagagctggct
gaggagtttaaagtgaagtttgatgagtgtcagaggcttcttttggacatccccttgcaa
accccccacaagctggttgacacaggccggacagcgcatctcattcagaaagcagaggaa
atgaagtctggtttgaaagacctgaaattctttttgacagatgagaaaacaaagatcaaa
gatgatgacaaacagggagatataacatccagcaatgtttcaagccttgtaatcaagggt
cacggtgaaaccactggtcccaccttggagtgggataactacgacctacgagaagatgct
ttagatgatactgctgacacatcagtctatgcctctcccatcactagtagccccttgaga
aagaacctgttccgctttggagaatccactagtgggttcagcttcagcttccaacctggc
atcagcccgtccaagtctcctgctaagcctaaccagagcagaacgtcagagggtactgac
gatgagcaggatgtaacccaggatgaggagagggatggccagtactttgagcctgtagtc
cccttgcctgatctggtggatatttcaacaggagaggaaaatgagcaggtggtcttcagt
cacagggccaaactgtatcgctacgataaggagctgggtcagtggaaggagaggggaatc
ggggacctcaagatcttgcagaattttaccaccaaacaagtgaggttgataatgaggaga
gaccaggtacttaagatatgtgccaaccactggatatcagcagccatgaagctggagcct
atgaaaggcgctgagaaggcctgggtgtggagtgccatggactttgctgaagaaggagag
ggtactattgagcagttggctgtgaggttcaagctgcaggatactgcaaacgcattcaaa
caagtctttgaagatgccaaggtcgctcaagaaaatgaggaacttatgactccagtgacc
tctgtagttcccacatctccggacactgcatctgcaggatctacaaagactgcaacagct
gtatgtgggaaggcagccatcgctgttctagaggagaccacaaaagaacgtacagagctt
ttccccgacattaagccatgttcacccagttctccgggtccaggcaactcctcaaagacg
gtggtgtctcctcctaagtttgtctttggcactgatagccttcagaagatttttggctcc
ccgagatctccctctgagggtgaggaatctgcatccggtctgaaagctaaagatgctgga
catccttcacctgcatcacctgcattcaaagtcccagagaaagggctggattttaggctt
ttcaaagataacccaatggctttttggaccagcacatcaaccacccaatttgaaccccca
gggccctcacaggcagaagaaggtggtgcagggtcggatgaggactcagaagtagagatc
ttgtatgtcagggaacccactgctgaacaggctgctttagccagggagctcctgctgcca
ctcaccttcttctgctaccagaacgaaccaggatacgtcagcgatgatcaaactgatgac
gaggactttgagtccgcagtaaaagccttgaatggaaagctctaccccgatgctcctgag
aaaggggcctcagcgtgtagcgatgcccttatcttgagtgtgccgccttcagagccagac
tgccaggtggtgtgggagaagaagccgacgccgcaggaagaggagaaggccaaaagcctc
ttgcttccacccactttcttctgcggcctgagcaccacagacagtgatacagaccacgac
aagacggaggacttcgagacagaagtccgcaaggcacagcgagaactggatgcccagtta
aatacaggagcagaagcccccagcagctctgcagttgccccagaagagcagacaccagct
ccgtcatccagcagctcagacactgcaggcaacacgtctacgccacaggagccgaccccg
gagcagccagtggagacttgtagtcaagttcccagcagcagcatcagcagcagcagctgt
cccatcgacctgtcaacaaagaagagctcagagccggagtccaacactgaggcaacagtt
tctaccacttctactacaactggtcaagacctctccagctttggcttcaaagatgttagt
ggcttctcatttgctgacttggcccaaacgacagaaggttattcatttggatctacagac
tccaacttctcgtgggcaaatgctggagcgacagtgtttgggtgtgcagtgccctcagca
ccaaaaaatactggagaagaggggggcactgatgatgagtcttcaaacaatgtggacatt
cattttgaaccaatagtgtctctaccagaggtggagaccaaatctggagaggaggacgag
gaaattctgtttaaggagcgtgccaagctgtaccgatgggaccgggacctcagtcagtgg
aaagagcgcggagtaggtgacctcaagatcctcttccacccgtccaaacatttctaccga
atcctgatgcggcgagagcaagttctgagggtttgtgcaaaccacaacatcactgaggtg
atggagctcaaacctatgaacgcctcggctaactcgctgatatggaccgctaccgactac
tcagatggcgatggtgaagtagagcagctggcggccaagttcaaaacccccgagatagca
gaatcattcaagaagacattctgcgagtgtcagaaccgaataggccagagcggcagcgat
gactcgtctgtcttgtcgccacagatgtctagaattcaagagcactccagagacagtaac
ccacaggtgttcttcaaagtgtcagccggcgaccaaacactgggcaccatcaccatagag
cttttctcccatattgtgcccaagacggcagaaaacttcaaggttctctgtaccggggag
aaaggcttcggactgcggaactccgtcttccacagagtcataccggacttcatgtgtcag
ggtggtgacatcacaaaaggtgacggcacgggaggcaagtccatctacggcagcaagttt
gaggatgagaacttcgacgttcggcatacgggcccaggaatcctgtcaatggccaactgt
gggcgcgacaccaacaactcccagttcttcatcacgctgaagaaagccgagcacctggac
ttcaaacacgtggtttttggttgggtgcgggacggcatggacgtggtgcagcagatgggg
gagctgggcacgaagggaggcgtgcccacgaagaagctggtcatcacagactgtggacag
ctgtag
DBGET
integrated database retrieval system
