Hippoglossus stenolepis (Pacific halibut): 118120466
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Entry
118120466 CDS
T08308
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
hsp04517
IgSF CAM signaling
hsp04519
Cadherin signaling
hsp04530
Tight junction
hsp04810
Regulation of actin cytoskeleton
hsp05100
Bacterial invasion of epithelial cells
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118120466 (arpc1a)
04519 Cadherin signaling
118120466 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118120466 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
118120466 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118120466 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118120466 (arpc1a)
05100 Bacterial invasion of epithelial cells
118120466 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118120466 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118120466 (arpc1a)
Membrane trafficking [BR:
hsp04131
]
Others
Actin-binding proteins
Arp2/3 complex
118120466 (arpc1a)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
118120466 (arpc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_Gbeta
RMC1_N
Beta-prop_HPS5
Rax2
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
118120466
NCBI-ProteinID:
XP_035031319
LinkDB
All DBs
Position
2:24783819..24789186
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQLAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QMKTEFLPLLSVLFISENSLVAAGHDCCPMLFRCDDGGTLTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcatcagttcctgctggagcccatcacctgccacgcgtggaaccgcgacagg
acacaactcgccatcagtcccaataaccacgaagttcacatctacaagaagagcggcaac
cagtgggtgaagacccacgagctgaaggagcacaatgggcacataacaggtatcgactgg
gctcccaaaagtgaccgtatagtgacgtgtggcgccgaccgcaacgcctacgtgtggtcc
cagaaggagggcgtgtggaagcccacgctggtcatcctcaggatcaacagagccgccacc
ttcgtcaagtggtctccactggagaataagtttgcagtcggcagtggagctcgactcatc
tctgtctgctactttgagtctgagaatgactggtgggtgagcaagcacatcaagaagcca
gtccgctccacagtcctcagtctggactggcatcccaacaacgtgctgctggcggctggg
tcctgtgacttcaaatgcagggtgttctcagcctacattaaggaggtggaggagaaacca
ggacccacaccctggggcagcaagatgccatttggggctgtgttagcagaatttggagga
gcgggtggaggaggttgggtccactctgtctctttctctgcatctggtaaccgcctggcc
tgggtcagccacgacagcactgtcactgtggtggacagctccaagactgccagtccttca
cagatgaagacggagttccttcctctcctcagtgtcctttttatctcagagaacagtcta
gtagcagcgggccacgactgctgccccatgctgttccgttgcgacgacggtggaacgctg
acattcgtgtcgaagctggacctcccgaagcagagcatccagaggaacatctccgccatg
gagcgcttcaggaacatggacaaaagagccaccaccgaggaccgcaacaccgccctggac
acactgcaccagaacagcatcacccaagtgtctatctatgaaggagacaaaagggattgt
cgcaagttctgcaccacaggcatcgatggagcaatgactatttgggatttcaagagtcta
gaagcttctatccagggtctccgcatcatgtga
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integrated database retrieval system
