Hippoglossus stenolepis (Pacific halibut): 118120489
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Entry
118120489 CDS
T08308
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04137
Mitophagy - animal
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118120489 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118120489 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118120489 (zgc:136908)
03009 Ribosome biogenesis [BR:
hsp03009
]
118120489 (zgc:136908)
04131 Membrane trafficking [BR:
hsp04131
]
118120489 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118120489 (zgc:136908)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118120489 (zgc:136908)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118120489 (zgc:136908)
Membrane trafficking [BR:
hsp04131
]
SNARE
SNARE associated proteins
Others
118120489 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118120489 (zgc:136908)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118120489 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
CDC48_2
Vps4_C
RNA_helicase
AAA_14
NPHP3_N
AAA_28
ATPase_2
Parvo_NS1
Mg_chelatase
DUF815
nSTAND3
AAA_7
ATPase
AAA_18
IstB_IS21
ABC_tran
AAA_17
NACHT
AAA_24
TsaE
ResIII
Sigma54_activat
NB-ARC
PhoH
Viral_helicase1
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
118120489
NCBI-ProteinID:
XP_035031377
LinkDB
All DBs
Position
2:10345221..10354830
Genome browser
AA seq
807 aa
AA seq
DB search
MPGSGAADPKGEDFSTAILKQKHRPNRLVVDENVSDDSSLVSLSQNKMEELQLFRGDTVV
LKGRKQRQTVCIVLSDDTCADERIRLNRVTRSNLRVRLGDVISIHACSDIKYGKKIHVLP
IDDTIEGLTGSLFDVFLKPYFLEAYRPVHNGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVMYCEGDPIKREDEEENLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDPTGRLEILQIHTKNMKLSDDIDIEKIARETHGHVGADLAALCSEA
ALQAIRKKLTLIDLEDESIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEVPQVNWAD
IGGLEEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGGGDASGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRSAILN
ANLRKSPIARDVDLALLSDITDGFSGADLTEICQRACKLAIREAIEAEIKAERQRQNRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
NRSGDQGSGSGSGRPNLYREEGDDDLY
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctcaggagcagcagacccgaagggagaagatttctccaccgccatcctgaag
cagaaacacaggcccaacagactcgtggtggatgaaaatgtcagtgacgacagcagcctt
gtcagcctgtcacagaacaagatggaggagctgcagctcttcaggggggacacagtggtg
ttgaaggggcggaaacaacgtcagaccgtgtgcatcgtcctgagtgacgacacctgtgcg
gacgaacggatccggctgaatcgtgtgacgcgcagcaacctgcgagtccgcctcggtgat
gtcatcagtatccatgcctgcagtgacatcaagtatggcaaaaagatccacgtcctcccg
atagacgataccatcgagggcctgactgggagcctcttcgatgttttcctcaaaccatac
ttcctggaagcttaccggcccgtacacaacggtgacatcttcctggtgaggggcagcatg
cgggcggtggagttcaaggtggtggagacggaccccagtcctcactgcatcgtcgccccc
gacaccgtcatgtactgtgagggagatccaatcaaaagagaggacgaggaggagaacctc
aatgacatcggctatgacgacatcgggggctgtcggaagcagctggcccagattaaagag
atggttgaacttcctctcaggcacccgggtctcttcaaggcaataggagttaagcccccc
aggggcatcctgctgtacggccctgcaggaacagggaagaccctggtggcccgagccgta
gccaatgaaactggggccttcttcttcctcattaatggtcctgagatcatgagcaagctg
gcaggagagtccgagagcaacctgagaaaggcgtttgaggaggcagagaaaaatgctcca
gccatcatctttattgatgagctggatgcaatcgctcccaagagagagaagacccatggt
gaggtggagaggcgtatagtgtcccagctcctgaccctgatggatggcctgaagcaaaga
gctcacgtggttgtcatggcagcaacaaaccgaccgaacagcgtggaccctgctctgaga
cgctttggcaggttcgaccgggaaattgacatcgggattccagatcctaccggcagactg
gagatcctgcagattcacaccaagaacatgaaactgtctgatgacatcgacattgagaag
atcgccagagagacccacggacatgtgggcgccgacctggctgctctgtgctcagaagct
gctctgcaagccatccgcaagaagttgactctcatagacctggaggatgaatccatcgat
gctgacctgctcaactcactggccgtcaccatggatgacttccagtgggcgctgagtcag
agcaacccatcggctctgagagagactgttgcagaggtgcctcaggtcaactgggcggac
atcggaggactggaagaggtcaagagagagctacaagagctcgttcagtacccagtcgag
tatccagacaagttcctgaagttcgggatgacgccgtctcgtggtgtgttgttctacggt
cctccgggctgcgggaaaaccctccttgccaaggctattgccaatgagtgccaggcaaac
tttatctccataaaaggccctgagatgctcaccatgtggtttggagaatcagaggccaat
gtcagagacgtttttgataaggccagacaggcggccccctgcatcttgttctttgacgag
ttagactccattgccaaatccagaggaggcggtgggggggacgcaagcggtgccgccgac
agagtcatcaatcagatcctcacagagatggacggcatgtccgacaaaaagaacgttttc
atcattggtgccacaaacagacctgacatcatagactcggccatcctgcggccgggccgt
ttggaccagctcatctatatcccactcccagacaagccatctcgctcggccatcctgaac
gccaacctacgcaaatctcctatcgcacgagatgtggatctggccctcctgtccgacatc
acagacggcttctctggagcggacctgacagagatctgccagcgagcttgcaagctggcc
atccgcgaggccatcgaggccgagatcaaggcagagcgtcagaggcagaacagaccaggc
atccccatggatgaggactttgatcccgtccctgagatcagaaaggaccactttgaagag
gcgatgcgatttgcccgtcgctctgtcagtgacaatgacatccgcaagtatgagatgttt
gctcaaactctgcaacagagccgaggttttggaaacttcaggttcccctctgctactggt
aatcggtctggagatcaggggtcaggctccggttcagggaggccaaatctctacagagaa
gaaggcgatgacgatctctattag
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