Hippoglossus stenolepis (Pacific halibut): 118120626
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Entry
118120626 CDS
T08308
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118120626 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118120626 (rad54l)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118120626 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
SWI2_SNF2
Mpp10
Motif
Other DBs
NCBI-GeneID:
118120626
NCBI-ProteinID:
XP_035031633
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Position
14:complement(27513109..27522877)
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AA seq
740 aa
AA seq
DB search
MRRSLAPSQVAKRRQGGDSCEDEEWTCRTDKKRKRDNEKRENHISPFRKPLTQLNNWPAC
VDGEKHEAFIRSILSKPFKIPIQNYTGALGIRALGLKRAGVRKALHDPFAEDALVLYEPP
NLSAHDLIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISESYGCIMADE
MGLGKTLQCIALMWTLLRQSPDAKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRITPVAID
GGSKDAIDKQLVNFMSQHGLRVPTPILIISYETFRLHTEVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDRDRHAGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELY
KRFLRQAKPVETLQEGKISVSSLSSITSLKKLCNHPALIYEKCVEGEEGFDGALDLFPPG
YCTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FTLNEETSSDTHDKFRCNRCVNGSEVRPPAEDSDCTSNLSQWNHCFNKKGLRDQVLKASW
DAAVSFVFHQRSHEDQKGVV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagtctggctcccagtcaggtcgctaagcggaggcaggggggtgactcctgt
gaggacgaggagtggacatgtagaaccgacaaaaaaagaaaaagagataatgagaagaga
gagaaccatatttctcctttcagaaagcctctgactcagctcaacaactggcctgcatgt
gtggatggtgaaaaacatgaggcatttattcgaagtatcctctccaagccatttaaaatt
ccgattcaaaattacacaggggcgctgggaatcagggcacttggtctgaagcgtgcagga
gtgaggaaagcacttcacgatccctttgcagaggatgctttggttctttatgagcccccg
aatctgagtgctcatgacctgatcaaagctgacaaagaaaaactgccagtccatgttgtc
gtggatccagttttaggaaaagtgctcagaccccatcagagagagggggtaaagttcctg
tgggagtgtgtgacaggcagacgcatctcagaatcatatggctgcatcatggctgatgag
atgggcttggggaagactttgcagtgcatcgccctaatgtggaccttgctacgccaaagc
cctgatgctaagccagagatagacaaggtcattgtggtttcaccttctagtctagttcgc
aactggtacaatgaagtaggaaagtggctgggaggacgcatcacaccagtggccattgat
ggaggttcaaaggatgcaatcgataagcagctagtgaacttcatgtctcagcatggtttg
agagttcccaccccaatcctgatcatatcctatgagacctttcgactgcacactgaggtt
ttacacaagggcaaagtgggacttgtcatttgtgacgagggccatcgactaaagaactct
gacaaccagacataccaggccctgaatgccatgagtgcacagaggagagtactcatatca
ggcacgcccatccagaatgatctgctggagtacttcagcctggtccactttgttaatgct
gggatccttggcacagctcaggagtttaaaaagcgctttgagcttcccatcctgaagggt
agagatgcagatgccagtgacagagacagacacgctggagaggagaaactcaaggagctc
atcagcatcgtcaacaggtgtctgatcaggagaacgtctgatatcttgtcgaagtatctc
cctgtgaaaattgagcaggttgtgtgttgcaggctgactcctctacagactgagctctat
aagcgtttcctgagacaggccaaacctgttgagacgttacaggagggcaagataagtgtc
tcctccctgtcttccatcacatcactcaagaaactgtgtaatcacccagcactcatctat
gagaagtgtgtggagggcgaggagggctttgacggggcgctggatctatttccaccggga
tactgcactaaagctgtggagcctcagctttctgggaaaatgctggttcttgattacatc
ctggcaatgacgaggacaacaactagtgacaaagtggtgctcgtctccaactacacacaa
acactggacctctttgagaaactatgtagatctagaagatatctctatgttcgattggat
gggacgatgtccatcaagaagagggccaagattgtggaaagattcaacaatccatcaagc
ccagagttcatcttcatgctgagcagtaaggcaggtggatgtggcctgaatctgattggt
gctaatcgcttggtgatgtttgatcctgactggaacccggccaatgacgagcaggcaatg
gcccgggtgtggagagacggccagaagaagacctgctacatctacagactgctctctacg
gggacaatcgaggagaagatcctgcagaggcaggcccataagaaagccctgagcagctgt
gtggtggatgaggagcaggacgtggagcgccacttctctctgggtgaactccgagaactc
ttcacgctcaacgaggagaccagcagcgacacacatgacaagtttcgttgtaaccgctgt
gtgaatggcagcgaggttcggcctcctgcagaggactctgactgtaccagtaacctttcc
cagtggaaccactgcttcaacaaaaagggcctgagggaccaggtgctaaaagcctcctgg
gatgctgcggtgtcctttgtcttccatcagcgctctcatgaggaccagaaaggtgttgtg
tag
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