Hippoglossus stenolepis (Pacific halibut): 118120660
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Entry
118120660 CDS
T08308
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118120660
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118120660
09144 Cellular community - eukaryotes
04510 Focal adhesion
118120660
09142 Cell motility
04820 Cytoskeleton in muscle cells
118120660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118120660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118120660
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118120660
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Phagocytosis
Opsonins
118120660
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118120660
Exosomal proteins of colorectal cancer cells
118120660
Exosomal proteins of bladder cancer cells
118120660
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118120660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
118120660
NCBI-ProteinID:
XP_035031693
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All DBs
Position
14:complement(9478760..9489206)
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AA seq
791 aa
AA seq
DB search
MWVLLGTKGRKLCWNQVCTRSTDTELKDGARARRDVKMARGKTILWLLVLTCVLSMGGHV
TEGQRDGEIISQIKLTNIALAEIKELLKQQIKEIVFMKNTVMECEACGMGGMKPRPSCVP
NPCHPGVTCMETPQGPKCGPCPDGMEGNGTHCSDVDECTVMPCHMGVRCINTSPGFRCGS
CPAGYTGPQVQGVGFAYATANKQVCKDINECEGPNNRGCVENSVCMNTPGSFRCGPCKTG
YIGDQRRGCKPERACGNGQPNPCHASAECIVHREGKIECQCGVGWAGNGYLCGSDIDIDG
IPDEKLECPEKNCNKDNCLTVPNSGQDDADSDGMGDACDEDADGDGILNMQDNCVLVPNV
DQRNIDEDDFGDACDNCRAVKNNDQKDTDVDKFGDECDEDIDGDGILNYQDNCKRVPNAD
QKDRDGDKVGDACDSCPYVPNPDQMDADNDLIGDPCDTNKDSDGDGHQDSRDNCPAVINS
SQLDTDKDGKGDECDDDDDNDGIPDLLPPGPDNCRLIPNPLQEDSDGNGVGNVCERDFDN
DTIVDSIDVCPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVVLNQGREIVQTMNSDPGL
AVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQVEQIYWQANPFRAV
AEPGIQLKAVKSNTGPGENLRNALWHTGDTSDQVKLLWKDARNVGWKDKTSYRWFLQHRP
ADGYIRVRFYEGPQMVADTGVIIDTTMRGGRLGVFCFSQENIIWANLRYRCNDTLPEDFD
TYRAQQVHLVG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgttgctggggacaaaaggacgaaaactatgctggaaccaggtttgcacgagg
agcactgacactgagctcaaggacggagcgagagcgagacgagacgtgaagatggccaga
ggtaaaaccatcctgtggctcctggtcctgacctgtgtgctctccatgggaggacacgtc
acagagggacagagagatggagaaatcatcagtcagattaaattgacgaacattgcgctg
gctgagattaaagagcttctgaaacaacagattaaagagatcgttttcatgaagaacaca
gtgatggagtgtgaagcctgtgggatgggaggaatgaagccccgtccctcctgtgtcccc
aacccctgccacccgggggtgacgtgcatggagacgcctcagggtccaaagtgtggaccc
tgtcctgacggtatggagggtaacggtacccactgctcggacgtggacgagtgtacagtg
atgccgtgccacatgggtgtgcgttgcatcaacacctccccgggcttccgctgtggctcc
tgtcctgctggatacactgggccccaggtgcagggcgtcggcttcgcatacgccaccgcc
aacaagcaggtgtgcaaggacatcaacgagtgtgagggccccaacaacagaggctgtgta
gaaaactcagtctgcatgaacacacctggctcgttcaggtgcggcccctgtaagacgggc
tacattggcgatcagcgacgtggctgcaagcctgaaagagcctgtgggaacggccagccc
aacccctgccacgccagcgccgagtgcatcgttcatcgagagggaaagatcgagtgtcag
tgcggagttggatgggctggtaacggctacctctgtggctctgacattgacattgatggt
atccccgatgagaaactggagtgtcctgagaagaactgtaacaaggataattgtctcact
gttcccaactctggtcaagatgatgcagacagtgacggaatgggagacgcctgcgacgag
gacgcagatggagacgggatcctcaacatgcaggataactgtgtgttggtgcccaacgtg
gatcagaggaacatcgatgaggacgacttcggcgacgcctgtgacaactgccgtgctgtg
aaaaacaacgaccaaaaagacacagatgtggacaaatttggtgacgagtgcgatgaagat
attgatggcgatggaatcctcaattaccaggataactgcaaacgggttcccaacgccgac
cagaaagatcgagatggagacaaagtgggagacgcctgcgacagttgtccttatgttccc
aaccccgaccagatggacgcggataacgacttgatcggagacccctgcgacaccaacaag
gacagtgacggtgacggccaccaggactctcgggacaactgcccagctgtcatcaacagc
tctcagctcgacacagacaaagacggaaagggagacgagtgtgacgacgatgacgacaac
gacggcatccctgacctgctgccacccggtcctgataactgccgcctgatcccgaaccct
ctgcaggaggactctgatggcaatggtgtgggtaacgtatgtgaaagggatttcgacaac
gacaccattgtcgactccattgatgtttgtccagaaaatgctgaggtcaccctcacagac
ttcagagagtaccagaccgtcgttttagatccagagggagatgcacagatcgaccccaac
tgggtggtgctgaaccagggacgagagatcgtccagacgatgaacagtgatcctgggttg
gctgttggttacactgctttcagcggtgtggactttgaagggacatttcatgtaaatacg
gtcacagacgacgactacgcaggatttatcttcggctaccaggacagctccagtttctac
gtggtgatgtggaagcaagtggagcagatctattggcaggcgaacccgttcagagctgtg
gccgaacccggcatccaactgaaggcagtgaagtcaaacacgggtccaggagagaacctg
aggaacgccctgtggcacaccggtgacaccagcgaccaggtcaaactcctgtggaaagat
gctcgtaatgtcggctggaaggacaagacttcgtaccgctggttcctccagcaccggccc
gctgacggctacatcagagttcgtttctacgagggtcctcagatggtggcagacacgggc
gtcatcatcgacaccacgatgagaggaggccgactcggagtcttctgtttctcgcaggag
aacatcatctgggccaacctgcgttatcgctgcaacgatactcttcccgaggactttgac
acctacagagctcagcaggtccatctggtgggctga
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