Hippoglossus stenolepis (Pacific halibut): 118120665
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Entry
118120665 CDS
T08308
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118120665 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118120665 (usp24)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118120665 (usp24)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118120665 (usp24)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118120665 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
DUF3517
UBA_RAD5A
UBA_7
Motif
Other DBs
NCBI-GeneID:
118120665
NCBI-ProteinID:
XP_035031701
LinkDB
All DBs
Position
14:20678693..20711527
Genome browser
AA seq
2628 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGSGSSGDGENSGRTGTGGFDPPPAYHDVVDSERSNDENGNCSGGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHSLADADENCKRFIDRCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERVKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKASQRN
WAEVFGEEANMFAVSPSNTYQKEPHGWLVDLVNRFGELGGFTAIQSKLNTEEIEIACVSA
LVQPLGVCAEYLNSSLVQPMLDPVIHKMIKYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVAVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWRIQAGQSSTVIENI
HTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLE
VLWELAHLPSLPTSLVQQALEEHLGILSDAYAVKEAVKRSYIIKCIEDIKKTHTQEDSKG
SDTQSSFLSGSWSKKKANALAKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITGSLVCCHRLAATAAGNNGLSGSTLVDGRYTYQEYLDSHLRFLAFF
LQEASLYLVWNRAKELWECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVTLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVLTIEDMYSVPRTILPHG
ASYNGHPVTLHITYESTKDTFTLETHSNETIGSIRWKISEHLSCPVDNVQIFANDSVVSL
LTMNRDQKLLSQLGFNDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEK
SLPGVVMALVCNVFEMLYQLANLDESRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVW
SHQKTLFSQGTGSRSPSMASKQQHQPSAASILETLFRSSAPGMSTFRVLYNLEVLSSKLM
PTSDDEMAKTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFL
LVGQSMPASLDDDVIRDGEALSSRPFRNAGRAGRQLSLCGTPEKSSYRQMSLSERSSIRV
EEIVPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRETHTSLLPQGVR
TRVSSTGSNCSSSSEGETIPTALHAGICVRQQSVSIKDTIIAREALSLLVTCLQLRSQQL
CSFYNLPSVNDFIIDVLLGSPSGEIRRVACDQLYTLSQSDTSGFPEVQKPNLFLLSVILT
AQLPLWSPTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEALKVSAATMLEDEISWL
DNFEPSWSSEMETSEADNVLLAGHLRLIKTLLSLCGNEKEHLGPSLIQQLLDDFLFRASR
IIINSSNPTPSPAPSHDFHPKCSTASSRLAAYEVLVMLADSSLSNLRLITKELLSMHHQS
DPSLCKEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIEDDTDQ
PEESVFYQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLD
EHLKKMGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFV
RGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRF
PWVLNMEPYTVSGMARQDCSGEGGEGRGDGTSGGSPRKKVTISENYELVGVVVHSGQAHA
GHYYSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVR
RRYWNAYMLFYQKISDQNSPVQPKKSRVSIMRQEAEDLTLSAPSSPDVSPQSSPRPPRAN
NDRLTLLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNRDVYNSDYFNFTLSLTSV
NATKLKHPDYQPMAKESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVDVLLSKSSEACQW
MVQYLVGPEGREITRVCLLECSMREVRVVVAAILEKTLESALHFGDPGLDGLTDALLSLL
DKDVPENVKNCAQYFSLFSNFAQRGCGPCQLLLKHSAYRRMLMFLLGPNRQNNQNRRWSP
AQAREFLHLHSTLALITLQSDLGPQRTHSPGGFKLRVVNVPSSSPLLPLHTDILTSLFTP
EGQPYLLEVMFAMRELSGPLSLLIEMVTYCSFCNEPFSLGVLQLLKIQLETAPPHELKNI
FQMLQELLVAEDPLQTQRLKHAFESDKGLLALMHQSNNMDSRRCYQCVKFLVTLAQKCPP
AKEYFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTLAYATAL
LNEKEQSGSSNGSDGSPANENAERSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7887 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacataacgacgctcctctgcatgggcttcccagacccc
gacgtgatacggaaggcgctccggctggcaaagaatgacatcaacgaggctgtggcgctc
ctgacgaacgaaagccccggactcgggtatggatacgagccgatggagagtgggcctgcc
ccgggctcgggctcgagtggagacggggaaaacagcgggcggacggggacaggagggttt
gacccgccgcctgcgtaccacgatgtggtggatagcgagaggagcaatgatgagaatggg
aactgctctgggggaagcatggagttccccaccaccaacctgtatgagctggagagtcga
gtcttcactgatcactggtcgataccttacaagagagaggagtccctgggcaagtgcctg
atcgcatccacctgcctcgccaggcacagtctcgctgacgctgatgagaactgcaagcgg
tttattgatcgctgcatgccggaggcctttaaaaagttgctgacgagcagtgctgtacac
aaatggggcacagagattcatgaggggatctacaacatgctcatgttgctggtggagctg
gtggcagagagggtcaagcaagaccctgttcctgtaaacctgatgggagtcctgactatg
gccttcaaccccgataatgagtaccattttaagaatcggatgaaggcctctcaaaggaac
tgggctgaagtgtttggagaagaggccaacatgtttgctgtctctcctagcaacacctat
cagaaagagcctcatggttggctggttgatttggtgaatcggtttggagagttgggagga
ttcactgccatccagtctaagctcaacactgaggaaatcgagattgcctgtgtatcagct
ctggtccagcctctcggagtttgtgcagaatacctgaactccagccttgtccagccgatg
cttgatccagtcatccacaagatgatcaaatatgtacagaacttggaggaaaaggatctt
aaagacaagcgcctggtgagcatcccagacctcctgtcggccatcaagctgctgtgtatg
aggttccagagggaactggtcgctgtggtggatgatctgcggctggacacgctgctgcgt
atgctcaaaactccccacttctccaccaagatgaactccctcaaagaggtgacaaagtta
atagaagagagcacggtgtccaagacggtgaaaaacgctattgacacagataaactgctg
gactggcttgtagagaactcagttctgtcaatagcactggaaggtaacatcgatcaagct
cagtactgtgagaggattaagggaatcattgagctgctgggcagtaaactttctctggat
gaactctctaagatctggagaatccaggcgggccagtcatcaactgtgatagaaaacatt
cacacaatcatcgctgctgctgctgtgaagttcagctttgatcaactcactcacctcttt
gtgctcatacagaagagctgggaggttgagagcgaccgtgtgagacagaagctgctcagt
ctgatagggaggatcggcagagaagctcgctctgaaaccacaactggaaaggtgctggag
gtgctgtgggagttggctcatcttccctccctgcctaccagtctagttcagcaggcgttg
gaggagcacctggggattctgagtgatgcttatgctgtcaaagaggcggtgaaacgcagt
tacatcattaaatgtattgaggacattaagaagactcacactcaggaggacagtaaaggc
agcgacactcaaagctcttttctttctggctcttggagcaagaagaaagctaacgctttg
gccaaagcctctcagcagagcagtcctcaggcagtctgggttgttcctgctctccgtcag
ctgcacgagatcacccgttctttcatcaagcagacctatcaaaaacaggacaagagcatc
atccaggacctgaagaagaactttgagatcgtcaaactgatcacaggatccctcgtgtgc
tgccatcgactggccgcgactgctgcgggaaataatggactttcaggctcgaccctggtg
gatgggcgatacacctaccaggagtatctggacagccacctgcgcttcctggccttcttc
ctccaggaggccagcctctaccttgtctggaatagggccaaagagctctgggagtgcctg
gtgtcggggccggacgtctgtgaacttgaccgtgagatgtgtttcgagtggttcaccaaa
ggacagcatgaccttgagagtgatgttcagcagcagctcttcaaagagaagatcttaaaa
cttgagccttatgagatcaccatgaacggttttaatctgtttaagaccttctttgagaat
gttaatctatgtgatcatcgcctgaaacgtcaaggaactcagctgtgtgttgagcgcctt
gacctggcagggatggattttatctggcgcatcgccatggaaacccctgatgaagaaata
gctaatgaagcaatccagctcataatcacatacagctacaccaacctcaatcccaagatg
aagaaggattctgtaactttgcataagaagttcattgctgattgttacaagagactagag
gcagcgagttcggctctgggtggtccaactttgacacatgctgtgactagggcaaccaag
atgctgacagccaccgccatgccgactgtggccacatctgtacaatcaccatccaggtac
agaggggggtttggatccactaagctggtaataatcgaaagactgctgctattggctgag
cgctacgtcctcactatagaggacatgtactcagttcctcgcactattctacctcatggg
gcctcgtacaatggacaccctgtcactcttcacatcacctatgagtcaaccaaagacacg
ttcaccttagagacccacagtaatgagacaataggaagtatccggtggaagatatctgag
cacttgagctgtccggtggataatgtccagatctttgccaatgatagtgtggtaagtctt
ctgaccatgaatcgggaccagaagctgctgtcacagcttggttttaacgatgaacagagc
ctgactgtgaagagctccggcactggcaccccatctggcagctccgagtcctcggcctca
gcctctagcagttccagctccgcggtcttcaactctgcctacgccttggagcaggagaag
tccctgcctggtgttgtgatggctttggtgtgtaatgtgtttgaaatgctttaccagctg
gctaaccttgatgaatccagaatcacccttcgtgtgaggaagctgctgctgttgatccca
acagacccagaggtgcaggatgctctggacaactttgttcccaaagaatccagtgtctgg
agccaccagaagacactgttcagccagggtacaggctctcgatctccatccatggcctcc
aagcagcagcaccagcccagcgctgcatctatattggagacactgttcagatcctcggca
cctggcatgtccaccttcagagtgctgtacaacctggaggtgttgagttcaaagctcatg
cccacatctgatgatgagatggccaaaaccagcagcaagtccttctgtgagaacttcctg
aaagcaggaggtctcagtctggtggtgaatgtgatgcaaagggactccatcccgtcagag
gtggactacgagaccagacagggagtctactcaatctgtcttcagctggccaggttcctt
ctggttggtcagagcatgcctgcatcactggatgatgatgtcatcagagatggcgaggcg
ctgtcatcccgtccgtttcgtaatgcaggaagagcagggcggcagctgtctctctgtgga
acgccagagaagtcctcctacaggcagatgtctttgtctgagcgctcgtccataagagtg
gaggagattgtacctgctgctcgtgtggccattcagaccatggaggtgggtgatttcacc
tccactgtggcctgcttcatgcgtctgacctgggcagcggcagctggccggttggatctg
gttggcagccctcagccaatcagagagacccacacatcccttcttccacagggagttcgc
accagagtcagcagtacaggaagtaactgcagctccagcagtgagggggagaccatcccg
acagcgttgcatgcagggatatgtgtcagacagcagagtgtctccatcaaagacaccatc
attgcccgcgaggctctgtcactgctggttacctgtctgcagctacgctctcagcagctg
tgttctttttacaaccttccctccgtcaatgatttcattattgatgttctgctgggatct
ccaagtggagagatccgccgtgtggcttgtgatcagctgtacactctcagccagtccgac
acctcaggcttccctgaagtccagaaacccaacctgttcctgctctcagtcattctcact
gctcaactgccactgtggagtcccacatcggtcatgagaggagtcaaccagaggctgctg
tcccagtgcactgagtactttgacctaagatgtcagcttctggatgacctaaccacatcc
gagatggaggcgttaaaagtgagcgcagccaccatgctggaggatgagatctcctggctg
gacaactttgagcccagctggagctctgagatggagaccagcgaggcagacaatgtcctc
ctggctggacacctccgcctcatcaagaccttgctctcactctgtggcaatgagaaggaa
catcttggtccatctctgatccagcagttgttggacgacttcctgtttcgagcctcacgc
atcattattaacagctccaaccccacaccatccccagctcccagccatgacttccatccc
aagtgcagcacagccagcagcagactggcagcctacgaggtgctggtgatgctggctgac
agctctctctcaaacctccggctcatcaccaaagagttactgtccatgcatcaccagtct
gatccttctctctgcaaggagttcgattatctgcctcctgtagagagccgatcagtctca
ggttttgtcgggctgaagaacggaggagccacatgttacatgaatgctgtgttccagcag
ctctacatgcagccaggtctgccagaggctttcctctccattgaggatgacacagaccag
cctgaggaaagtgtcttctaccaggtgcagtctttgtttgggcatctgatggagagcaaa
ctgcaatactatatacctgagaacttctggaagatcttcaagatgtggaacaaggagttg
tatgtgagggaacagcaggatgcttacgagttcttcactagcctggtggatcagctggac
gagcatctaaagaaaatgggtcgagagcagatcttcaaaaacacatttcagggaatcttc
tctgaccagaagatttgtaaagactgtccacacaggtacgagcgtgaagaaaccttcatg
gcgttgaaccttggagtaacttcatgtcagagtctagagatctcattagaccagtttgtc
agaggagaggtgcttgagggtagcaacgcctactactgtgagaaatgcaaggagaagaga
accacagtgaaaaggacatgtatcaaatccctacccagcgttctctgcattcacctcatg
cgctttggcttcgactgggaaagcggacgctccatcaaatacgatgaacagattaggttc
ccctgggtgttgaacatggagccctacactgtctctggaatggctcgtcaggactgcagt
ggagagggtggcgaggggcgaggagatgggacgtcaggagggtcgcccaggaagaaagtc
acaatttctgagaactacgagcttgtgggagttgttgtccacagcggtcaggcacatgcc
ggacactactactccttcattaaagacaggcgtggtagtgcccggggtcgttggtacaag
ttcaacgacaatgtggtggaggagtttgatatgaatgatgaaactctggagtacgagtgt
ttcggtggagagtaccgccccaaagtctacgaccagtccaacccgtaccctgatgtgcgg
aggagatactggaatgcctacatgttgttctatcagaagatcagcgaccaaaactcaccg
gtccagcccaaaaaaagtagagtcagcatcatgaggcaagaagcagaggaccttacactg
tctgccccgtcctctcctgatgtttccccgcagtcctctcctcgccccccacgggccaac
aatgaccgtctcaccctcctcacccgtctggtccgcaaaggagagaagaagggcttattt
gtagagaagatgcctgccagcatctatcagatggtgcgagatgaaaatctcaagttcatg
aggaacagagacgtctacaacagcgactacttcaacttcacactctcgctcacctccgtc
aatgcaacaaagctgaagcatcctgactaccagcccatggccaaagagagtctccagctg
gctgttcactttctcttccacacatacctgcacaccaaaaagaaactccgggtggacacg
gaggagtggatggccacagtagatgtgttgctgtctaagagcagtgaggcgtgtcagtgg
atggtgcagtacctggtcggaccagagggacgtgagatcaccagggtttgtctgttagag
tgcagcatgagggaggtgagggtggtcgtcgcagccatcctcgaaaagaccctggagagc
gcacttcacttcggagacccaggattggacggtttgaccgacgccctgctgtccttactg
gacaaagatgtccctgagaatgtgaaaaactgtgctcagtacttcagcctcttcagtaac
tttgctcagaggggttgtggtccttgtcagttgttgttgaaacactcagcttatcgccgg
atgctcatgttcctgttgggaccaaacaggcagaataaccagaaccggcgctggagtcca
gcacaggctcgggaattccttcacctccacagcactctggccctcatcaccctgcagtct
gacctcggcccacagcggacacactctccaggtggttttaagctgcgtgtggttaacgtc
ccgtcatccagcccactcctccccctccacacggatatcctgacctcactcttcactcca
gagggacagccttaccttctagaggtaatgtttgccatgcgtgagttgtcaggcccgctg
tctctcctcatagaaatggtgacctactgctcattctgtaatgagcccttctccctgggt
gtgctgcagctactcaagattcagctggagacggctccacctcatgaactgaagaacatt
tttcagatgctccaggagctactagtagctgaagaccctctgcaaacccagagactcaaa
catgcttttgagtcagacaaaggcctgttagccttgatgcaccagagcaacaacatggac
agcagacgctgctaccagtgtgtgaagttcctggttacattagcccagaaatgtcctcca
gccaaggaatacttcaaggacttgtctggtcactggagctgggcagtgcagtggctacag
aaaaagatgacagaacactactggactccacagagcaacgtctccaatgagacatccacc
aacaaaaccttccaacgcactatctccgcacaggataccttggcctatgctacagcgttg
ttgaacgagaaggagcagtctggcagcagtaacggctctgacggcagcccagcaaatgaa
aacgccgagcgcagcctccgacaggggtcagagtctcccatgatgcttggcgattccaag
agcgatctagaagacgttgacccatag
DBGET
integrated database retrieval system
