Hippoglossus stenolepis (Pacific halibut): 118120755
Help
Entry
118120755 CDS
T08308
Name
(RefSeq) dynein intermediate chain 2, ciliary-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118120755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118120755
04812 Cytoskeleton proteins [BR:
hsp04812
]
118120755
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
Dynein arm
118120755
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
118120755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
WDR55
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
DMAP1_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
118120755
NCBI-ProteinID:
XP_035031897
LinkDB
All DBs
Position
14:complement(23578959..23581507)
Genome browser
AA seq
678 aa
AA seq
DB search
MSGPNSKVAASVKKGSTAQKVPGVKPTKVAKKGKDDEECVDKGVGWDESHRKGPIKPEDQ
LELTEAELKEDITRILDAKNPHAPENIVRYSFKDNSYKPVVVEQVAIHFVLEGSLIHQDS
DEAKRMIAGEGLPGEAVTEETGAEPDEEKNETLATPVEDEGEVEGVGEEDRPDSVASKKQ
KKRPNQINFSERASQTLNNPLREKSIQTDPPPRINFSANANQWENYDAHVEELLKLEKNK
EKQKDTVPERVILMESDDLTEVGKASKIFERMIHQNTFDDKAQNFKYFEDASDEFKDQEG
TLLPLWKFHYDKAKTLSVTALCWNNKFDDLFAVGMGSYDFRNQGFGMVVFYSFKNSSFPE
YIYPTKSGVLCLDIHKQHSNLVAVGFYDGCVAVYNLNNEGVEPVLKSTAKTGKHTDPVWQ
VRWQNNDMDNNHNFYSVSSDGRVVSWTLVKNELLYTDIIRLSLIGAVSEGPEDAQLPMFT
CGTAFDFHKQIDSLFLVGTEGGKIHKCSKTYSSHILETYNAHSMAVDAVKWNCFHPKVFV
SSSLDWTVKIWNHTVNTPLLTFDLNAAVGDVSWSPYSSTVFGAVTADGKVHVFDLSINKY
EPICRQSVVAKGTKLTHLEFNPINPTITVGDDRGYVTSFKLSPNLRTKPKAKKGQELLEG
PEVEVAKMETLLRLLQEM
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggccaaacagcaaggttgcagcctcggtgaaaaagggctcaactgctcagaag
gtacctggagtgaagccaaccaaagttgctaaaaagggaaaggatgatgaggaatgtgtg
gataagggtgttggctgggatgagtctcataggaaaggacctattaaacctgaagatcaa
ctggagctcactgaggctgagttaaaagaggacatcacaaggatcctggatgccaaaaac
ccacatgcacccgaaaatattgtacgctacagcttcaaggacaactcctacaagcctgtt
gttgtggaacaagtggctattcactttgtgttggagggcagccttatacatcaagactct
gatgaggccaaaagaatgatagccggagagggtctcccaggagaggctgtaacagaggaa
acaggagctgaacctgatgaggagaaaaatgaaaccctggctacacctgtagaagatgaa
ggggaagtggagggagttggagaagaagacagaccagatagtgttgcctccaagaagcag
aagaaacgtcctaaccagatcaacttcagtgagagggccagccagaccctcaataaccca
ctaagggaaaaaagcatccagactgatcctcctccacgcatcaacttctctgccaatgct
aatcagtgggagaactatgacgcgcacgtggaggagctgctaaaactagaaaaaaataaa
gagaagcagaaagacacagtaccggagagggtgatattgatggagagcgacgacctcact
gaagtaggaaaagcatccaagatctttgaaagaatgatccatcaaaacacatttgatgac
aaagcacaaaatttcaaatactttgaagatgcctctgatgagttcaaggaccaggagggc
acccttctccctttgtggaagttccattatgacaaagctaaaacactgtctgtcaccgcc
ctctgctggaataacaaatttgatgacctgtttgctgtgggtatgggatcgtacgacttc
aggaaccagggatttggcatggttgtcttctattcgtttaagaactcatcgtttccagag
tacatctaccccaccaagtctggcgtcctgtgtctcgacatccacaagcagcattctaac
ctggtggccgtgggcttctatgatggctgtgtggccgtctacaatttgaacaacgaggga
gtggagcctgtgctcaaaagcacagctaagactggcaagcacactgaccctgtctggcag
gtacgctggcagaacaatgacatggacaacaaccacaatttctattctgtgtcatctgat
ggccgtgttgtgtcttggacacttgttaagaatgagctgctctacacagatattatcaga
ctgtcactgattggtgctgtatctgaagggccagaagatgcacagctgcccatgttcact
tgtggtacagcgtttgacttccacaaacagatcgactctctcttcctagttggcacagag
ggagggaaaatacacaagtgctccaagacttactccagccatatactggagacctacaat
gcccacagcatggcagtggatgctgtgaaatggaactgcttccacccaaaagttttcgtc
tctagcagtttggactggaccgtcaagatctggaaccatacagtcaacactccattgcta
acctttgacctgaatgctgctgtcggagatgtttcctggtctccatattcctccactgta
tttggtgctgtcacagcagatggcaaagttcatgtttttgacctcagtatcaacaaatat
gagcctatctgtcggcagtctgttgtggccaaagggacgaagttgacgcacctggaattt
aaccccatcaatcccaccatcacagtgggtgacgacagaggctatgtcaccagcttcaaa
ctctcccctaaccttcgcacgaaacccaaggctaagaagggtcaggagctgctcgaaggt
ccagaagtggaagtagccaaaatggagacgctgctcaggctgctgcaggaaatgtag
DBGET
integrated database retrieval system
