Hippoglossus stenolepis (Pacific halibut): 118120761
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Entry
118120761 CDS
T08308
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00260
Glycine, serine and threonine metabolism
hsp00270
Cysteine and methionine metabolism
hsp00450
Selenocompound metabolism
hsp00670
One carbon pool by folate
hsp01100
Metabolic pathways
hsp01230
Biosynthesis of amino acids
Module
hsp_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118120761 (cth)
00270 Cysteine and methionine metabolism
118120761 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
118120761 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118120761 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118120761 (cth)
Enzymes [BR:
hsp01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
118120761 (cth)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118120761 (cth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
118120761
NCBI-ProteinID:
XP_035031909
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All DBs
Position
14:12095847..12107523
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AA seq
409 aa
AA seq
DB search
MDPKQKTDDRGDVFAGFRSTFKSFATEAIHVGQEPEQWKSMAVVPPISLSTTFKQHGPGN
HAGFEYSRSGNPTRNCLEKAVAALDGAKYSLALASGLAATVTITHMLKTGDGIVCMDDVY
GGTNRYFQRIATEVGLEVSFADCTKPELVKAALKPNTKLVWIETPTNPTMKVVDIKACSD
LIHEHNKDIVVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSTNRDDLN
ERLRFLQNALGGVPSPFDCFLCNRGLKTLHLRMERHFKNAMGAAKFLEADPRVERVIFPG
LPSHPQHEVMKKQCTGCPGMITFYIKGTLEHASTFLSNLKIFAIAESLGGYESLAEHPAI
MTHASVPEKERCLLGISDTLIRLSVGLEDEADIIADLEQALAAAHPMKN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaagcagaagaccgatgatcggggcgacgtgttcgccggtttccgctcgacg
ttcaagtccttcgccaccgaggccattcacgtgggtcaggagccggagcagtggaagtcg
atggccgtggtgccgccgatctccctctccaccaccttcaagcagcacggaccggggaac
cacgccgggtttgagtacagccgcagtggaaatcctacaaggaactgtcttgagaaggcc
gtggcagctctggatggagcaaagtacagccttgctctcgcctcagggcttgctgccaca
gtgacaataactcacatgctcaaaacaggtgatgggatcgtctgcatggatgacgtgtac
ggaggaacaaatcgctacttccaaagaatcgccactgaagtcggcctggaggtgtcgttt
gctgattgtacaaaaccagagctggtgaaggcggcactgaagcccaacacaaaactggtg
tggatcgagacgcccaccaaccccacgatgaaggtcgtcgacatcaaggcctgctccgac
ttgatccacgagcacaacaaagacattgtggtggttgtggacaacaccttcatgtccgcc
tacttccagcgtcctttggctttgggagctgatatttgtatgtattcagccacgaaatac
atgaacggtcacagtgatgtggtgatgggtctggtttcaacgaaccgggatgatttgaat
gagcgactgaggtttctgcaaaacgcactgggtggtgtaccatctccatttgactgcttc
ctgtgcaaccgcggactcaagacgctacaccttcggatggagcggcacttcaagaatgcc
atgggggcagccaaatttctcgaggctgatcccagggtggagcgagtcatctttccaggc
ctgccctctcacccgcagcacgaggtgatgaagaaacaatgcaccgggtgtccaggcatg
atcaccttctacatcaaggggaccctcgagcatgccagcaccttcctcagtaacctcaaa
atatttgcgatagccgagagtctcggtggttacgagagtttagctgaacatccggcgatt
atgacccacgcatcagtgccggagaaggagaggtgtttgctggggatcagcgacacactg
atcagactctctgtgggcctggaggatgaggccgacatcattgcagacctggagcaggcg
ctggctgctgctcatccaatgaagaattga
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