Hippoglossus stenolepis (Pacific halibut): 118120775
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Entry
118120775 CDS
T08308
Symbol
patj
Name
(RefSeq) LOW QUALITY PROTEIN: inaD-like protein
KO
K06092
InaD-like protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118120775 (patj)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
118120775
NCBI-ProteinID:
XP_047198791
LinkDB
All DBs
Position
14:complement(747374..817589)
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AA seq
1927 aa
AA seq
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MFENVLTVSSAERQQVLGALDRLHSKLVQKEEWTHSDSVGNLRETLQSPLFNHILTLQHS
IKQLRHQLSSMPPDACSEFSFSKKGQLIMSATSSSAPPTLSASSSSILTNGSSPPINQNP
PTLDVLQKWILIAAQGRHTELVRLTRPLSGGLGFSVVGLNPAGSSSQGVFVKHVQPGGIA
HRDGRLQERDQILVINGHPLEPGVDQQQALTLLQQPGETVELMVARDRPPSAPSPITLVN
KDQWSHVEEIELVNDGSGLGFGIVGGKTSGVVVRTLIPNSVADKDGRLRTGDHILRIGAT
PTTGLTSDQVVKALQGCGSHVTMLIARDPRGQRSTGPHPPPPPDSAPVSSLSPRPPELPL
QRPDHAPQRRLSKTPNLEGYEIHEVPLTKNDGQSLGISIIGYNPLTSQDAVGVFVKHVVP
GSAADQSGNILVYDRLMAMDGVSLHGMTNHEVLEVMKQTGQTVVLTVVRKKPRALERSLD
KVERESSRVSLQRSLEVKSRSSGSSTMKLEQMHLSTAQLSREAELRAKWDQALGPTYQVV
ELDPVIEDDAELQKSSKLLPVHTLRLGVELDSFDGHHYISSVAPGGPVDKHGVLRPEDEL
LEVNNVQLYGKTRREVVSFLKEVPPPFTLVCCRHPTSDLEPEPEPEPESESESEPASGPG
RGAAGRSQPSVEEIELKLSSMLCSQTVLRDQQQQVVTQEEEEEVEEEESQHSQEEDEEEE
EEDDEGELALWSPDVQMLELQKERDKGLGFSILDYQDPLDPGRCVMVIRSLVPGGSAERH
GGLLPGDQLVSVNHIQLDLLTLAQSVEVLKSIPSGTVRLGIRKPLVVEATERSRKDDNTT
SLSNTQLPVPKGFGDGSILPEDLRREEEEEEEEPELILDGGLPRYATSCMTSVLLPVEEG
REMAVDEEEMKTTEEREEEKMGSLSRKPPPSWEEWRLTSSSRGRPEESWSHKQDDEQTSE
RESIVSEGNQILDFRDSEAESELTLTDTDTESVRMIDMGRRKRRTQGGASLPIRGGHRNL
PEREEGEGEETPAFSHWGPPRRVEVWAEEDESLGLSIVGGHHVIKRLRNGEELKGIFIKQ
VLPKSPAAKTLCLKTGDKILEVSGVDLRAASHEEAVSAIKSAPSPIVFIVQSLCATPRPV
SLTAPSYIKHKGKTMDSLKTTPPLRQPPPYTAPSQSENELNSDLEQAKERWCERYGDLQG
ELLCVEVEKERQGLGLSLAGNRDRSRLSIFVVGLSPGGAAARDGRIRVGDELLEINNQIL
YGRSHQNASAIIKSAGSKVKLILLRNEDAINQMAVPLPPPPPPPVLSLECVSPAAPGVPA
PSDGPCPPDSLVLHPPPPSSSSSSSSETQVSLCGEAEVVPVTDPSPPDKTNDEAEHNRNR
SSVSAPQSLSEADALRKRQKESPVDELQAPRALLEQQSCRSYSSSSKQTAAAPLISPDLQ
TVNRDPSCCAVVPGQEMMLEICKGRSGLGLSIVGGRDTQLDAIVIHEVYEEGAAARDGRL
WAGDQILEVNGVDLRGASHEEAIAALRQTPAKVCLMVLRDEAQYRDEDNLDMFKVELQKR
SGRGLGLSIVGKRSGSGVFISEVVRGGVAQLDGRLMQGDQITSVNGDDTRHASQETVAAI
LKCARGPVLLELGRLKAASWISSRRISQGSQMSHVSGASSGVVAPPLTQPPASSDPPASN
PPAVTSSVTLLLNNNVTSSSDITSSSDITSSSANNTDAGSRTVTVTRGVSDSLGVSIAGG
KGSPLGDIPIFIAMIQANGVAAKTHQLKVGDRIVSINSQSVEGLSHSEVVTMLKNSYGGI
NLQVVADTNISAIATQVESLSGGFSLTDNTDTHTAEPEGPRPRSISLEKGSEGLGFSIVG
GFGSPHGDLPIYVKTVFSKGAAAVDGRLKRGDQILSVNGESLQGATHEQAVAILKKQRGS
VTLDILS
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatgtcctgacagtgtcctctgccgagcggcagcaggttctcggagctctg
gaccgtcttcactctaaactggtccagaaggaggagtggactcacagtgactctgtgggg
aacctgagggagacgctgcagagccctttgttcaaccacatcctgacactgcagcactcc
atcaaacagctgagacaccagctgagcagcatgcctcctgacgcctgcagcgagttcagc
ttctctaagaagggtcagcttatcatgagcgccaccagcagctcggccccgcccaccctc
tctgcctcctcctcctccatcctgaccaatggctcgtcaccgcccatcaatcagaacccg
cccacactagacgtcctccagaagtggatcctcattgccgcccagggccggcacacggag
ctggtgcgtctgactcggcctctctctggaggtctgggcttcagcgtggtcggtctgaat
ccagcaggaagcagcagtcagggggtctttgtcaaacacgttcagcctggaggcatcgct
cacagggacggacgtctccaggagcgagaccagatcctggtgattaacggtcaccctctg
gagccgggggtcgaccagcagcaggccctgaccctcctgcagcagcccggagagactgtg
gagctgatggtggcccgggatcgcccacccagtgcgccgtcgcccatcacactggtcaac
aaggaccagtggagtcatgtggaggagatcgagctggtgaatgacggatctggtttgggc
ttcggcatcgtgggggggaagacgtcgggggtggtggtcaggacgctcatccccaacagt
gtggcggacaaggatggacgtctccgcacaggtgaccacatcctccgaattggggcgacg
cccaccacgggcctcaccagcgaccaggtcgtcaaggctctgcagggatgtgggagtcac
gtgaccatgctgattgccagggatcctcgaggtcagaggtcaacaggtcctcatccccca
ccacctccagactctgcccccgtctcctccctatccccccgaccccctgagctgcccctc
caacgccctgaccacgccccccaacgccgcctcagcaagacgcccaacctggaaggatac
gagatccacgaggttcctctcaccaagaatgacggtcagagtctcggtatctccatcatc
ggctacaatcctctgaccagtcaagatgcagtcggagtgtttgtgaaacacgtggttcca
gggagcgctgctgaccagagcgggaacatcttggtctacgaccgactgatggctatggac
ggcgtcagtcttcacggaatgaccaatcatgaggtgctggaggtgatgaagcagacgggt
cagactgtggttctcactgtggtcaggaagaaacccagagccctggagaggtccctggat
aaagtggagagggagtcgtctcgtgtgtctctgcagaggtcactagaggtcaagtctcgc
tcttctggctcctcgacaatgaagctggaacagatgcacctgagcacagcacagctcagc
agagaagcagaactgagagctaaatgggatcaggctctgggaccaacataccaagtggtg
gagttggatcctgtcattgaagatgatgcagagctgcagaaatcctccaaactgctgcct
gtgcacacgctgcgtctcggggtggagctggactcgttcgacggtcaccattacatctcg
tctgtggcccctggaggccccgtggataaacatggagtgttgagaccagaggacgagctg
ctggaggtgaacaatgttcaactgtacgggaagactcgtcgtgaagtggtgtcgttcctt
aaagaggttcctcctccattcactttggtctgctgccgacacccgacctctgacctggag
ccagagccagaaccagaaccagagtctgagtctgagtctgaaccggcgtcaggacccgga
cgaggagcggcaggacgatcgcagcccagcgtggaggagatcgagttgaagttgtcgtcg
atgctctgcagtcagacggtcctgagagaccaacagcagcaggtagttacacaggaggag
gaggaggaggtggaggaggaggagagtcaacacagccaggaggaggacgaggaggaggag
gaggaggatgatgaaggggagctggctctgtggtcaccagacgttcagatgttggagctg
cagaaggagcgagacaaaggcctcggcttcagtatcctcgattaccaggacccgttagat
cctggtcgctgtgtgatggtgattcgctctttggttcctggcgggtcagctgagcgtcac
ggtggcctacttcccggagaccagctagtttcagtcaaccacatccaactggacctgctc
accttggcccagtctgtggaggtcttaaagtctatcccatctggcactgtccgcctgggt
atccggaagcctctggtggtggaggcgacagagaggagcagaaaggacgacaacacgacg
tctctcagcaacacgcagctgcctgttccaaagggcttcggtgatggctccatcctgcct
gaagaccttcgacgggaagaagaggaggaggaggaggagccagagcttatcctggatgga
ggtctgcctcgctacgccacctcctgcatgacctctgtcctcctgcctgtagaagagggt
agggagatggctgtggacgaggaggagatgaagacgacagaagagagagaagaggagaag
atgggctctctctccaggaaacctcccccgtcatgggaggagtggaggctcacctcctcc
agccgaggtcgaccagaggagagctggagtcacaagcaggatgacgagcagacgtcagag
cgagaaagtatcgtgtctgaaggaaaccagatcctggacttcagagacagtgaagcagag
tctgagctcactctgacagacaccgacacagagtctgtcaggatgattgacatggggagg
aggaagaggcggacccagggaggagcctctctaccaatcagaggaggccacaggaatctt
cctgaacgagaggagggggagggagaggaaactccggccttcagtcactggggacccccc
cgcagggtggaggtgtgggcggaggaggatgagtctctgggcctgagcatcgtgggaggt
catcacgtcatcaagcgtctgaggaacggcgaggagctgaagggaatcttcatcaaacag
gttctgccaaagagtcctgccgccaagacgctttgtctgaagaccggagacaagatcctg
gaggtgtcaggtgttgacctacgagctgccagtcacgaggaggcggtcagtgccattaaa
tcagctccgagtccgatcgtcttcatcgtccagagtctttgtgcgacgcctcggcctgtc
tctctaacagctcccagctacattaaacacaaagggaagacgatggactctctgaaaacc
acgccccctctgagacagcccccgccctacactgctcccagccaatcagagaacgagctg
aactctgacctggagcaggccaaagagcgctggtgtgagcgttacggagacctgcagggg
gagctgttgtgcgtggaggtggagaaggagcgtcagggtttgggtctcagtctggcagga
aacagggatcgttcccgcctcagcatcttcgtggttggactcagtcctggaggagcggcg
gctcgagacggacgcatccgggttggagatgaactgttggagatcaacaaccagattctt
tatgggcggagtcaccagaacgcctcggccatcattaagagcgccggctccaaggtgaaa
ctcatcctgctcagaaatgaagatgctataaaccagatggctgtcccccttcctcctccc
cctcctccccctgtgctcagccttgagtgcgtctctccagctgcccctggtgtccccgcc
ccctcagacgggccgtgcccccccgacagcctggtgctccacccgccaccaccatcctca
tcctcctcttcttcatctgagacacaggtgagcctgtgcggtgaagctgaggtggtccca
gtgacggacccgtcgccaccggacaagacgaacgatgaggccgaacacaacaggaacaga
agcagcgtgagcgccccccagagtctgagcgaggccgacgccctcagaaagagacaaaag
gagtccccagttgacgagctgcaggctccgcgggcgttgctggagcagcagtcctgcagg
tcgtacagcagctccagtaaacagacagcagctgctcctctgatcagccctgacctgcag
actgttaacagagacccatcatgctgtgccgtggttcctggtcaggaaatgatgttggag
atctgtaaaggtcgatcgggacttggactgagtatagtgggaggaagagacacacagctg
gatgccatagtgatccatgaggtgtatgaggaaggagctgcagccagagatggtcgactg
tgggcaggagaccagatactggaggtcaacggtgtagacctccggggagcgtcccacgag
gaggcgatcgccgccctgcgtcagacgccggcaaaggtttgtctgatggtgctgagggac
gaggctcagtacagagacgaggacaacctggacatgtttaaggtggagctgcagaagagg
agcggcagaggactcggactcagcatcgtcgggaagaggagtggcagtggtgtgtttatc
tctgaggttgtcagagggggcgtggctcagctggacggtcgtttaatgcagggagatcag
atcacgtcagtgaacggagacgacacgagacacgcctcccaggaaactgtggccgccatc
ctgaagtgtgctcggggtccggtcctgttggagctcggccgactcaaagctgcatcctgg
atctcatccagacgtatctcacagggaagtcagatgagtcatgtgagtggagccagctca
ggtgtcgtagctccgcccctcacacagcccccagcctcatctgacccccccgcctccaac
cctccggccgtgacctcctccgtgaccctgctcctcaacaacaacgtcacttcctcctct
gacatcacttcctcctctgacatcacttcctcctctgccaacaacacagatgcaggctct
cgtacagtgacagtcacaaggggcgtcagtgactccctcggggtgagtatagcggggggg
aagggtagcccgctgggcgacatcccgatcttcatcgccatgattcaggccaatggcgtc
gccgccaagacgcatcaactcaaggtcggagacaggatcgtcagtattaacagtcagtct
gtggaaggtctgtcacacagtgaggtcgtcaccatgctgaagaacagctacggaggcatc
aacctgcaggtggtcgcagacaccaacatcagcgccatcgccactcaggtggagagtttg
tccggcggctttagtctgacggacaacaccgacacacacacagcagaaccagagggtccg
cggccccgcagcatcagtctggagaaaggctctgaaggactcggctttagcatcgttgga
ggattcgggagtccacacggagacctgcccatctacgtcaagaccgtcttcagcaaggga
gcggcggcggtggacgggcgtctgaaacgaggcgatcagatcctgtcggtgaacggagag
agtcttcagggagcgacgcacgaacaggccgtcgccatcctgaagaaacagagaggaagt
gtcacactggacatcctgtcataa
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