Hippoglossus stenolepis (Pacific halibut): 118120793
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Entry
118120793 CDS
T08308
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118120793 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118120793 (rubcn)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Other autophagy associated proteins
Others
118120793 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
Motif
Other DBs
NCBI-GeneID:
118120793
NCBI-ProteinID:
XP_035031985
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All DBs
Position
14:complement(11446216..11470064)
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AA seq
957 aa
AA seq
DB search
MEIAAEEEAEERRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLQKDMNNILSHGL
KNEQVYYKQRDYWPFVWCVRYVSPHLASHVEQFSKLEPVLSSGMQSTGESFKAERWLLHS
LQVHMLSAQLRPLLRHLGHARKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKGPQCLGLLKSQSLCVLPGAGGAWRNRDAVPRGETLNRRLTTSNCSLREAVFTSH
KSGPSTGVRSQNSNSTNTTSPAGIVGPPWVCVSRPGESERGITSPPGSVSVPCITLKEST
TPTHPQPEAGDSGDGDYDDGPEYLAIGNLGQRSRRDSQSSTHSSEQGVTPGHSMERRSQA
PPPPRRSSFSEVQRGSGRGSRGHTRSFSDTGINQKLRNESPVDECCLKDYSPFSPQCSDS
SDPSSLYMESYGSQYSSVPDGMFRKPSEGQSLISYLSEQDFGSCADLEKENAHFSISESL
IAAIELMKCNLRRREEEGEEEGDSDCEIQQLKQKIRLRRQQIRHSRLPPCTTSHPIIHST
DSGGSRRSSQDSYQGLSDSGSAEEVEECELRDGCEGQSLLAVSQNGLSLSLASLFSDADI
KRSVSSRSFLSSESISPSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEHDAPQKL
LPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKKKIVVAKQNYRC
AGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFSKYYVSNFARDLL
SKIAGDPLFNPNDINSGLYKKVKPLEAVRVLRVQLFHMKNLFKTCRFAKGVLDHFDSLPG
HLTEDLHLFSLNDLSAVRNGELAPRMKELIKLGTVHVDGCVLCQAKGFVCEFCGNDKDII
FPFQLNKCQRCEECHACYHRNCFRAGKECPRCLRLAERRERMARKNMEEQEDEGGGT
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcggcggaggaagaggcggaggagcgcaggagggagcactggaagctgctg
tccagcctgaagaccacagtggagggtctcgtgtccactaacaaccccaatgtgtggtcc
cgctatggcggcctgcagcggctccagaaggacatgaacaacatcctcagtcacggcttg
aagaatgagcaggtttactacaagcagagagactactggccgtttgtgtggtgtgtccgc
tacgtcagccctcacctcgcctcacacgttgaacagttcagtaagctggagccggtgctg
agcagcgggatgcagagcactggtgaaagcttcaaggccgagcgctggctgcttcacagc
ttacaggttcacatgctgtcagctcagctccgacctctgctcaggcatctgggacatgca
cgtaaatactataatgatgatgcgtttctgctgagcgagcctcacgtgacagccatgttt
cagtgtctggaagctgtggaacagaacaatcccaaactgctggcccaagtagacacagtt
gggctgtcccctctgaagggcccacaatgtctgggtctgttgaagagccagagcctgtgt
gtgttgccaggggccggtggggcctggagaaaccgtgacgcagtgcctagaggagaaact
ctaaaccgcagacttaccacctccaactgctcgttgcgtgaagcagtcttcaccagccac
aaatctggaccctctacgggagtccggtcccaaaacagcaacagcacaaacactacctct
cctgccggcatcgtcggacctccctgggtgtgtgtgtccaggccaggggagagcgagcga
ggcataacatccccccccggctccgtctcggtcccttgtatcaccctaaaggagtccaca
acgcccacccatccccaacctgaagctggggactctggtgatggtgactatgacgacggg
ccagagtacctggctatcggtaacctggggcaacgcagtcgccgtgactcccaaagctcc
acccacagtagcgagcagggtgtgaccccggggcattccatggagcgaagatcccaggcc
ccgcccccacctcggcgctcgtctttttctgaggtccagagggggtcgggccgtgggtcc
cgaggacacacccgctcgttctcagacacagggatcaatcagaaactcaggaatgaatcg
cccgttgacgaatgctgcttgaaggactacagccccttctctcctcagtgcagtgattcc
agcgatccaagttccctctacatggagtcttatgggtcccagtacagcagtgtgccagat
gggatgttcaggaaaccgtcagagggccagagcctcatcagctacctgtcagagcaggac
tttggcagctgtgctgaccttgaaaaggaaaacgcccatttcagcatttccgagtccctt
attgcagcaatcgagttgatgaagtgcaacctgcggcgtcgggaagaggagggcgaggag
gagggagacagtgactgtgagattcagcagctgaagcagaagatccgcctacgcaggcaa
cagatccgtcacagccgcctgccaccctgcacaacctcccaccccattattcactccact
gacagtggaggctccaggaggagctctcaggactcctaccagggcctgtcggactcaggc
tcagctgaggaggtggaggagtgcgaactaagagatggctgcgagggtcagtccctgctg
gcggtgtctcagaacggcctctccctgtcactcgcctccctcttctcagatgcagacata
aagcgcagtgtgagcagcagatcttttctcagctcagagtccatctctccatccttcctt
cagtctaactctgctgagtcagtagccatgggtttgctcaggcagtttgagggcatgcag
cttcctgctgcctcggagctggactggctggtcccagaacacgacgctccacagaagctg
ctgcccatccctgactctctcccgatctcacctgacgatggtgaacacgcagacatctac
aagctgaggattcgtgtccgaggcaacctcgagtgggcaccgccgcgaccgcagatcatc
ttcaacatccaccctgcccccaagaagaagatagttgtggctaaacagaactaccgctgc
gctggctgtggcacccgcatcgacccagactatattaagcgactgcgttactgtgagtac
ctcggccgttacttctgtcagtgctgccatgagaacgcccaggcggtggttcccggtcga
gtgctgaggaagtgggacttcagcaagtactacgtcagcaactttgcccgtgaccttctg
agcaagattgctggagacccactgttcaaccctaatgacatcaacagcggcctctacaag
aaggttaaacctctggaggctgtacgggttttgagggtgcagctgttccacatgaaaaat
ctcttcaagacctgtcgctttgctaaaggggtgctggaccacttcgacagcctgccaggt
cacctgactgaggaccttcacctcttctccctcaatgacctcagtgctgtgcgcaacgga
gaactggccccccggatgaaagagctgattaaacttggtaccgtgcacgtagatggttgt
gtgctttgccaggcgaagggttttgtgtgcgagttctgcggcaacgacaaagacatcatc
ttcccctttcagctgaacaagtgccagcgctgcgaagagtgtcatgcgtgttaccatcga
aactgcttccgggcgggtaaagaatgccctcgatgtctgcggctggcggagcggagagag
aggatggcacggaaaaacatggaggaacaagaagacgagggaggagggacctag
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