Hippoglossus stenolepis (Pacific halibut): 118120801
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Entry
118120801 CDS
T08308
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp02010
ABC transporters
hsp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118120801 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118120801 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118120801 (abca7)
Transporters [BR:
hsp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118120801 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
CDC27
AAA_23
Motif
Other DBs
NCBI-GeneID:
118120801
NCBI-ProteinID:
XP_035031996
LinkDB
All DBs
Position
14:complement(9183772..9209660)
Genome browser
AA seq
2392 aa
AA seq
DB search
MGFFRQLFLLLWKNITYRRRNKLQLIIELLWPLFLFVILISVRQSHPPYKQKQCHFPNKA
LPSAGTLPWIQGIVCNINNPCFHSPTPGETPGQFGNFDNSILSRLFVDAHTILSYGGNWS
FSGFQDLMESVRSLGDRPGAWPIETVQNYMKANETLSPFLLTNTTLSPVTVDQLMKARLN
FQVSVAGAQMQLKDLVCNASMLRQFLTVDGGEAAMNDLQTQLCDLPADVLQEAERLFLSQ
LDFTKFFTRNRLMANAANLRDISQAVTSVSQELAVLMDDFSSLSSFAEMSAALRLLSPEN
RTALPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDTNLDRDNNTTP
FCKSLIQGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAIKQVMKEVNKTFEDLQILQQLN
EAWMEVGPQVKRYMESSVQIQLLKDLLRRPEVAVLVNLRLENTSWTASRISRFLATPSPD
APRNPGAPLTWLDIYNDISHTITTLAQVTECFSLNKLEGLESEGHMIDRALELLEDRQFW
AGVVFLLPNSTSAELPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFSDMRYIWGGF
VYVQDLVEQAVSRVLTGVKQTTGIYIQQMPYSCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSVVPFLVSAALLIAMLKCGDILPYS
DPSVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTT
THRILASFLSPVAFGFGCEYFSQYEEQGVGIQWHNLRSSPVEGDAYSFTISIIMLYVDAF
IYAVAAWYIEAVFPGEYGIPRPWYFIFQINYWGGVPLEAGMPIPPAPADQGEDHIEAEPS
NLILGVSIKNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRHDMDIIRKMLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEEEVNAELD
TLLDNVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLSCCGSPLFLKSKLGSGYYLTVVKRE
GLNTSTPSSTSICTSTSISTNKLPPLKDSESSLSEDTGLGSEENSSYLAALLALAQHHIP
GARLVEESRREAVINLPQEAAKNSSLAVFLSDLDQRRTELGISSYGISDSSLEEIFLRVA
EETEVNAESELQDESPDGQRPPAGQRVEIQCAEEPETGRKRLRKQESQETDPLSGDGRGG
IPMTGWWLTWQQMRALFVKRWLYARRSRRGIFAQIVLPAVFVLVALLFSLIVPPFGKYPN
LQLQPWMYGQQYTFFSNDAPGNPAMENLLEALLDQPGFGTKCMETEEEDNITSRQCEGER
DGLFMRPQVSYSTWQLFNRGNWSRDRPSPECQCSTEDVRRMLPDCPQGAGGLPPPQIRRL
TGDVLQNLTTYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGGATQTLPQVHHVQ
DSVMAIRSRYRVPQNSSLNNLLNRLPDVLGVLNSQNNVKVWFNNKGWHAMVSFVNVMNNG
LLRASLPPGPERRRHGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASF
VLFLIEERVSKAKHLQFVSGVKPILYWLANFSWDMLNYTVPATMVVLIFIAFQQQSYVSE
TNLPALVLLLLFYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLELFV
DEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGSRPNLDPLHWDFIGKN
LFAMAAQGVIFFIFTILLQYKFFINFRPWWTEHETPPLGPEDEDVARERERVKSGKAQSD
ILTMTDLSKVYKAGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTPITYGEA
SLNHYSVLTEMEQVHQLMGYCPQFDAISDLLTGREHLELYARLRGVQEESVPKVAQWGVK
KLGLTQYAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSV
TKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLADTKP
SPDLCPVSSYMKSSFPSIELKERHHNVLQYQLPSHACCLARVFDVLANNYEELGISDFSV
SQTTLDQVFVNFAKEQTDDDDGLTDVVISNGTVQTNLTVLPLRINPPTIPPHPPVTPPQQ
SKTPQPQTISSDSKPKEGKSKKAKSSKGKSKEGKSNGEKSNSMAMTKLPQAVEKDQEMPR
TSRRGSSGSDSSNNGVQGQSSKSRKSKHRVQSSSKDPSALFIVGSNSQDSEL
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcagacagctcttcctcctgctctggaagaacatcacataccgcaggagg
aacaagctccagctgatcatcgagctcctctggccgctcttcctctttgtcatcctcatc
tccgttcgccaatcacaccctccttacaaacagaagcaatgtcatttcccaaacaaagcc
ctgccatcagcaggcaccttgccctggattcagggcatcgtctgcaacatcaacaacccc
tgcttccacagcccgacaccaggggagaccccgggacaatttggcaactttgacaactca
atactgtctcgtctcttcgtggacgcccacactattctgtcctacggtggaaactggagc
ttctcaggctttcaggatctgatggagagcgtccggagcctgggagacagacctggagct
tggccaatcgaaacggtacaaaattacatgaaagccaatgagactctttccccgttcctc
ctcaccaacaccactctgtcacctgtgaccgtggaccagctgatgaaggctcgtcttaac
tttcaggtttctgtggctggagctcaaatgcagctgaaggacttggtgtgtaatgcaagc
atgctaagacagttcctgacggtggatggaggagaagctgctatgaatgatcttcagact
cagctgtgtgatttgcctgctgacgtcctgcaagaggccgaacgtctttttctctctcag
ctcgacttcaccaagttcttcacaagaaaccgtctgatggccaacgctgcaaacctcagg
gacatcagtcaggctgtcacctcagtttcccaggagctggctgtcctcatggatgatttt
tcctccctctccagttttgcggagatgagcgcagcgcttcgtctcctgtcaccggagaat
cgcacggcgctgcccagagagagtttccgagccttctcgaggatcatgtgcggtcaccct
gaggttggtggtgaacgcatcccttcactcaactggtatgaagacaatgacatcaagtcc
ttcttaggcaaaaacggcactgaggacaccaacctggaccgggacaacaacaccactcct
ttctgtaaaagtttgatccagggtctggagtccaaccccctgtctcgcattgtgtggcga
ggaatcaaacctctctttattggaaaactgctgtacacaccagacacacctgcaataaaa
caagtcatgaaagaggtgaacaaaacgtttgaggacctgcagatcctccagcagctgaac
gaagcctggatggaggtgggacctcaagtcaagagatacatggagagcagcgttcagatt
caactgctgaaggatttgttgaggcggccagaggttgcggtcctggtcaacctgcgtttg
gaaaacacatcctggacggcctcacggatctcacgattcctggccacaccctcaccagac
gcccctaggaatcctggagcacccctgacctggctggacatctacaatgacatcagccac
accatcaccactctcgcccaagtcactgagtgtttctctctgaacaaactggaggggttg
gagagtgagggtcacatgattgacagagcacttgagctgctggaggacaggcagttttgg
gccggtgtagttttcctgctgcccaactctacatctgctgagctgccgcctcacgtcacc
tacaagatccgaatggatattgatgatgtgactcggaccaacaagataaaggacaggttt
tgggatcctggcccagcagctgacccattcagtgacatgcgctacatttggggcggcttc
gtgtacgtgcaggacctggtggagcaagctgtgagtcgtgtcctgaccggagttaaacag
actacgggcatctacatccagcagatgccctactcctgctatgtggatgatgtttttctc
cgagtgttgaaccgctccctgccactcttcatgactttggcctggatctactcagtcgcc
atgatcataaaaggtgtggtgtacgagaaggaggcgagactgaaggaaaccatgaggatt
atgggtctgggaacgggaacgctgtggctcagctggttcatcagcagcgtggttcctttc
ctggtttctgcagcgcttcttattgctatgctcaagtgtggggacatcttgccgtacagc
gacccgtctgttgtctttttcttcctcatggcgtttgccacggccaccatcatgcagtgt
tttctcattagtaccttcttctccaaagccaacctggctgctgcctgtggggggctcata
tactttagcctctacctgccttacgtactgtgtgttgcctggagagaccacctcaccact
acacacagaatcctcgctagttttctctctcctgtggcgtttgggttcggctgtgagtat
ttctctcagtacgaggagcaaggtgttggcatccagtggcacaacctgcgctccagcccc
gtggaaggagacgcctacagcttcactatctctatcatcatgctttacgtggatgccttc
atctacgccgttgcagcctggtacatcgaagccgtgttccctggtgaatatgggatcccg
aggccttggtatttcatcttccagattaactactggggtggagttcccctggaggcaggc
atgccgatcccgccggcacccgcagaccagggtgaagatcacattgaagcagagcctagt
aacttgatcctgggcgtgagcatcaaaaacctggtgaaaatctacaagaagggagctaaa
ctggccgttaaccacctcaacctgaagttctatgagggacagatcacctcgttcctcggc
cacaacggagctggcaagaccaccaccatatccgttctgacgggcctgttcccaccaacc
tctgggaccgtctacatcaaggggatggacattcgccacgacatggacatcatccgaaag
atgctgggagtttgtccacaacacaatgtcctgtttgacatattaacagtggaggagcat
gtgtggttttatggatgtctgaagggtttgtctgaagaagaggtgaatgccgagctggac
actctgttggacaacgtcggtctgctgcacaaacgacacgaacagaccaaaaacctctcc
ggtggcatgcagaggaagctgtctgtggccatagcgtttgtagggggatccaaggtggtt
gttttggatgagcctacagctggagttgatccttactcccgcagagggatctgggatctg
ttgctcaaatatcgcaaagaccggaccataatcctgtccactcactacatggatgaggcc
gagctgttgggtgaccggattgccatcatctcccaggggaagctctcctgctgcggatca
ccgctcttcctgaaatccaagctgggatctggttattacctcactgtggtgaagagggaa
ggactgaacaccagcactcccagcagcaccagtatctgcaccagtaccagcatcagcacc
aacaagctgcctcctctcaaggacagcgagtcgtcactgagtgaagacactgggctggga
agtgaagagaacagctcatacctggcggcattgctcgccttggcacagcaccacatcccg
ggagcgaggctggtggaggagtcaagacgagaggccgtgatcaacctgccgcaggaagct
gctaagaacagtagcctggccgtcttcctgtccgacctggatcagaggcgcaccgagctg
ggcatcagcagctacggcatttcagacagctcactggaggagattttcctgcgagtggca
gaggaaaccgaagtgaatgctgaatctgagctgcaggatgaatcccccgacggccaacgg
cccccagcaggacaaagagtggagatacaatgtgctgaagaaccagagacaggaaggaaa
aggcttcgtaagcaagaatcccaggagaccgatccgctgagcggagacggccgaggtggg
atccccatgaccggctggtggctgacgtggcagcagatgagggctctctttgttaaacgc
tggctttacgctcggaggagccgcagaggcatcttcgctcagattgttcttcctgccgtg
tttgtcctggttgcccttctcttcagtttaatcgtacctccgtttgggaagtaccccaac
ctgcagctgcagccgtggatgtatggacaacagtacaccttcttcagcaacgacgcccct
gggaacccggccatggagaacttactggaagctctacttgaccaaccgggttttggtacc
aagtgcatggagacagaggaagaggacaacatcacgagtcgtcagtgtgaaggtgagcgg
gacggtctgttcatgcgaccacaggtgtcttactccacttggcagttgttcaacagagga
aactggagcagagacagaccctctcctgaatgtcagtgcagcacagaggacgttcgacgg
atgctccccgactgtccgcagggtgcaggaggactgccaccgccacagattaggaggctg
actggagacgtcctccaaaatctaacaacttataatatctctgattatctggtgaaaact
tactctcagatcctcaagaaaagcctgaaaaccaagaagtgggtgaatgaattcagatat
ggaggcttctccctcgggggcggcgccacccagactttacctcaggtccatcatgtccag
gactcagtcatggcaatcaggagtcgctacagagttccacagaacagttcattgaataat
cttcttaaccggctgccggatgttctcggagtactgaacagtcaaaacaacgttaaggtg
tggttcaataacaaaggctggcacgccatggtgtcatttgtcaacgttatgaacaatggt
ctgctgagagcgagtctaccaccaggtccagagaggaggagacacggcatcactgcctac
aaccacccgctcaacctcaccaaagagcaactcacagaaatggccatgatgacgacatca
gtggacgttctggtttccatctgcgtcatcttcgccatgtcctttgtgccggccagtttt
gtcctttttctgatcgaggagcgagtcagcaaagccaaacaccttcagtttgtcagcggg
gtcaaaccgatcctctactggctcgccaacttcagctgggacatgctgaactacacggtt
ccagccaccatggtggtgctgatcttcattgctttccagcagcagtcgtacgtttcggag
acaaacctgccggctctcgtcctgctgctcctcttttatgggtggtccattacccctctc
atgtacccagcatcctttgtgttcagcgtaccaagcacagcttatgtggttctgacttcc
atcaacctgttcattggaatcaacggcagcatcgccaccttcgtcctggagctgtttgta
gacgagcatctgaacgaggtgaatcggatcctaaagaaagtcttcctcatctttcctcat
ttctgtctgggacgaggtctcatcgacatggccaaaaatcaggccatggcagacgccttc
cagagactgggcagcagaccgaatctggatccgctgcactgggattttattgggaagaac
ttgtttgcaatggcagctcaaggcgttatcttcttcattttcaccatactgctgcaatac
aagtttttcataaacttcaggccgtggtggactgagcatgagacgcctcctctgggtcca
gaagatgaggacgtggccagggaaagagagagggtcaaaagtggcaaagcccagtcagac
atcctcaccatgaccgacctgagcaaggtttacaaagcgggcaggaagccagcggtggat
cgtctctgcctcgggatcccacggggagagtgtttcgggctgctgggggtgaacggagca
gggaagacctcgacatttcgcatgctgactggagacacacccatcacctatggagaagct
tccctcaaccattacagtgtgctgacagagatggagcaggtccaccagctgatgggttac
tgtccacagtttgacgccatcagcgacctgctgacaggtcgggaacatctggagctgtac
gcccgtctgcggggggttcaggaggaatctgtccccaaggtggcgcagtggggggtgaag
aagctggggctgacacagtatgctgaaagagaggctggaggctatagcgggggcaacaag
aggaaactctccactgccatctcccttattggagctccgcctgttatattcctggatgag
cccaccactggaatggacccaaaggccaaacggtttttgtggaactgcatcctcagcgtc
accaaagagggaagagctgtagttctcacctcccacagtatggaggaatgtgaggctctc
tgcaccagaatggccatcatggtcaatggcaggttccagtgtctgggatctgttcagcac
ctgaagaacaggttcggtgatggctacaccatcgttcttcgtctggcagacactaaaccc
agcccggacttgtgtcccgtcagcagctacatgaaaagctctttccccagcatcgagctg
aaggagcgtcaccacaacgtgctgcagtaccagctgccctcacacgcctgctgcctggct
cgcgtgttcgacgtgttggccaacaactacgaggagctgggcatctccgacttctctgtt
tcacagaccacactggaccaggtgtttgtcaactttgccaaagagcaaactgatgatgat
gatggcctcacggatgtggtcatcagcaacgggacagtacagaccaacctgactgtactg
cccttgaggattaatcctcccaccatcccaccgcaccccccagtcacaccccctcagcaa
agcaagaccccacagccgcagacgatatcatctgacagcaaaccgaaagagggaaaatcc
aaaaaagccaaatccagcaagggtaaatctaaagaaggcaaatctaacggagaaaaaagc
aacagtatggcaatgaccaaattacctcaggctgtggagaaggaccaggagatgcctcgg
acgagccgcaggggcagcagtggatcagacagcagcaacaatggagttcagggacaatcc
agtaaatccagaaagtccaaacatagagtacagagctccagtaaagatccatctgcactt
tttatagtgggcagcaactcacaggacagtgagctgtga
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integrated database retrieval system
