Hippoglossus stenolepis (Pacific halibut): 118120846
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Entry
118120846 CDS
T08308
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118120846 (brat1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118120846 (brat1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT
TOR1L1_N
MMS19_C
Cnd1
FAD_binding_5
Motif
Other DBs
NCBI-GeneID:
118120846
NCBI-ProteinID:
XP_047199397
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Position
2:25398853..25404150
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AA seq
894 aa
AA seq
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MDRECVSLLPRVCEVLRGSGSSLPDDTSLEKLLDWFTGLTEAGGSVQETCPCLLEFISAV
VLQTSSDPGVICFTLKLSGLIAATEDGFKTLQGSVLDMAFNPQHWRDAGLWEDPCIRIGW
IQGLRNMLQHSKAFTFFVQADFLVPLLQLQTDSSLFVASAANQTLAHTLIFFQPGCDGTF
KDHGKVKRTQTSITDVEPSSQDYSAVLGTISQFLKESLLPKENTRLHQSQQILKLLALLL
ARARQPLRDKLLGTVADSLEELVAAGYSQLTLPLMDIILASYSSSSTDDCVPDQRVTRLL
SSMLNITKPSDLIGAAAAFLRGGRHHQDTVHTARAVRILLLPLHIITGQTLLGTDTTGEE
HHFSIAEQLKIKTSCISMMCVCLTHTPPITLVPRDSLPCPPVSIITAVLSLLRIVSGDSS
SLSSGCSEVFRNLVGSGKVQKCALEVLTGLSSSPGMKDKLTEVVTVLIQYLNNPDSDPTV
IHKSYQALLKWMSVCEGVSLLTEKLKQDLIDVVKKRVCDMRWEVRDSTVEFLGKLAGVLK
QGEETCDALLGGCWSTPLLREALQDPESYVRASAIAALAQTLEHSWHQGAAVTQEQTDVV
TRLLEILSQDTEGFARRAVVQYFIAWFSSRSSHTSPLSSPSSSSSSSSSLRMNSVSSVLS
LGSADLDWEVKVHTLELAELLMDEACSGHRGYRKGSETPPALRHPYAGISDQTLGEGVES
DVAGALSNLVEQGVVSALLSGLVDCDRPVGLKACQLLITLRETVCPRPPLDAPPATATVA
KVSCELPGCGWGREVRKIPGMKRFDRVKEADIAHRTRCAEVGMEVASEGGDSVCVGVCDM
LRSLGLDEKLDILSQSSDHVHNSALSLLQDILTASAAHTQQDAEPGQEVIVDCY
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggagtgtgtgtcgctgctgccccgggtgtgtgaggtgctgcggggctcaggg
tcctctctgcccgatgacaccagcctggagaagctgctggactggttcacgggactgacc
gaggctggtggatctgtgcaggagacgtgtccatgtctgctcgagttcatctccgctgtg
gttctccaaacctcatcagaccctggtgtcatctgcttcaccctcaaactctctggttta
atagccgccaccgaggacggcttcaaaacacttcagggctctgttctggacatggcgttc
aaccctcagcactggcgtgacgccgggctctgggaggatccctgtatacggattggctgg
atccagggcttgaggaacatgctgcagcattcgaaggcttttactttctttgtacaagca
gatttccttgtgccgctcctacagcttcagacggactcgagtctgtttgttgcctcagct
gcaaatcaaacgctcgcccacaccctgatcttctttcagccgggatgtgacggcacattt
aaggatcacggcaaagtcaagaggacacaaacctccatcactgacgtggagccctccagc
caagattactctgctgtgctcgggacaatctcacagttcctcaaggagtcgctgcttccc
aaagaaaacacccggctccatcagagtcagcagattctcaagctgctggctctgctcctg
gctcgggcccggcagcctctccgggacaagctgctcgggacagtcgcagactccctggag
gagctggtggcggcaggatacagtcaactcaccctccctctgatggacatcattctggct
tcatacagcagctccagcactgatgactgtgtcccggaccaacgtgtcactcgtcttcta
tcgtccatgctgaacatcaccaaaccctcggacctcattggtgcagcagctgcttttctg
cgcggaggtcgtcatcatcaagacaccgtccacacagctcgggctgtgagaatcctcctg
ctgcccctccacattatcactggtcagactctcctgggcacagacaccacaggagaagag
catcacttttcaattgcagagcagctgaagattaaaacctcctgcatctcaatgatgtgt
gtgtgtctgacccacacgccaccgatcacactcgtgcctcgtgactcactcccctgtcct
ccggtttcaatcatcactgcggttctgtccttgttgaggatcgtcagtggagactcttcc
tccttgtcctcgggctgttctgaggttttcaggaaccttgttggatctggaaaagttcag
aaatgtgctctagaggttctgacgggtctcagcagcagcccaggaatgaaagacaaactg
actgaggtcgtcacagttctgatacaatatctgaacaaccctgactctgaccccactgta
atacacaagtcgtaccaggccttattgaagtggatgagtgtgtgtgaaggcgtctctttg
ttaacagagaagctcaaacaagatctcatcgacgtggtgaagaaacgtgtgtgcgacatg
cgctgggaggtgagagactccactgtggagtttctgggaaaactggcaggtgtcctgaaa
caaggcgaggagacgtgcgacgctctgctgggcggctgctggagcactcctctcctcagg
gaggcgctgcaggatccagagagctacgtgcgggccagtgccatcgctgcactggcacag
acactggagcatagctggcaccagggggcagcagtcacacaggagcagactgacgtcgtg
acccggctgctggaaattctctcgcaggacacggagggattcgccaggagagcagttgtg
caatatttcatcgcctggttttcttctcgttcctcccacacatctcctctgtcgtctccc
tcctcctcctcctcctcctcctcctctctgcggatgaactctgtgagctccgtcctctct
ctaggcagcgccgatctggactgggaggtcaaagttcacactctggagctggccgagctg
ctgatggacgaagcctgttcaggtcaccggggttacaggaagggctccgagacgcctcct
gctctgcgtcacccatacgctgggatttctgatcagactcttggagagggggtggagtca
gatgtggccggcgcgttgagtaatctggtcgagcagggagtcgtctcggctttgctgagt
ggtctggtggactgcgatagacccgtgggtctgaaggcctgtcagctcctgattacactc
agagaaactgtctgccctcggccgcccctggatgctccccctgccacggcaacagtcgcc
aaggtgtcctgtgaactgccgggatgcggctggggccgggaggtcagaaaaataccgggg
atgaagaggtttgatcgggtcaaagaggcagacatcgctcatcggactcgttgtgctgag
gttgggatggaagtcgcgagcgagggcggcgacagtgtgtgtgtcggcgtgtgtgacatg
ttgaggtctctgggtttggacgagaaactggacatactgagtcaaagcagtgaccacgtc
cacaactctgctctctctctgctgcaggacatactgactgcgagcgccgcacacactcag
caagacgcagaaccaggacaggaagttatagtggactgttactga
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