Hippoglossus stenolepis (Pacific halibut): 118120870
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Entry
118120870 CDS
T08308
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118120870 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118120870 (sart1)
04121 Ubiquitin system [BR:
hsp04121
]
118120870 (sart1)
Spliceosome [BR:
hsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
118120870 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
118120870 (sart1)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118120870 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
118120870
NCBI-ProteinID:
XP_035032179
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All DBs
Position
2:23824190..23827003
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AA seq
779 aa
AA seq
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MGSSKKHKEKSRDKDTEDRRREHKKHRHKERDASERDATRAKDKRKRSRSRDRSGREGRS
KGDKGSGEPRVKKEKEDAAYEESHAEVQPQSASGDASLSIEDTNKLRAKLGLKPLEMNEN
KKELGTKEDPMVAATINPVLIKKQKDMREKLAALKEKRILNKKLGKVKTLAEEDWVDDTS
AWVERSRNMAKEKELADKRAKLLEEMDQEFGVSSLVEEDFAQSKNDSYTCRDLKGLKVQH
KVESFTEGQTIVLTLQDKGVLEEEEDTLVNVGLVDKERADRNVELKKKKPEYKPYEEDES
VDDMITLKSHSVLSKYDEEIDGEKKKSFRLNTGGFADGEREREIQAMRETLRNQAQTLEM
PALAIASEYYTPQEMVGFKKIKSRVRKIRKKEKQTAADELRIDDTRSTDFGSRSRGRGRR
KVDIDGEEIKEEEGEEKEKEESKPPHIIPLLSDDIRMAEMEMSDDDDFTPPEPAVIEEDE
AELELQKQLEKQRKLRQKQLLKDSGEKVAEQIKELDKGESDNDPERKNNIVFNATSEFCR
TLGDIPTYGLSGNREDQEEIMDFEQEEEKDDAGGSDSEIDENIGWSTVNLDEEIKQPDFA
TASATILDEEPIVNSGLAAALHLCKNKGLLDTQMQKVARVKATKGALPNDNYCIEDKMGF
DDKYSRREEYRGFTQDFKEKDKYRPDVKIEYVDESGRRLTPKEAFRQLSHRFHGKGSGKM
KTERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggggtcctcgaagaaacacaaggaaaagagccgcgacaaggacacggaggaccggcgc
cgtgaacacaagaaacatcgccacaaggagcgagacgcctcggagcgggacgccacccgg
gccaaggacaagcggaagcgctccaggtccagagataggagcggacgagagggtcgcagc
aaaggggacaagggcagcggtgagccccgggtgaagaaggagaaggaggacgctgcatac
gaggagagccatgcagaagtgcagcctcagtctgcgagcggagacgcgtccctcagcatc
gaggacacgaacaaactcagggccaagctgggtctgaagcctctggagatgaacgagaac
aagaaggagctcggtaccaaggaggacccgatggtggccgcgaccatcaacccagtcctc
atcaagaagcagaaggacatgagagagaagctcgccgctttgaaggaaaaacgcatcctg
aacaagaaattggggaaagtgaagaccctggctgaggaagactgggtggatgacacgtct
gcttgggtggagagaagcagaaacatggcaaaggaaaaagaattggcggataaaagagcc
aaacttctggaggagatggaccaggagttcggtgtgagcagcctggtagaggaggatttc
gctcaaagcaagaatgactcctacacgtgtcgagatttgaagggactcaaggtgcagcac
aaggtggagtccttcaccgagggtcagaccatcgtcctgaccttacaggacaaaggtgtg
cttgaggaggaagaagatactctcgtgaacgttgggctggtggacaaggaaagggcagat
aggaacgtggaattgaaaaagaaaaagccagaatacaagccttatgaagaagatgagagc
gtggatgacatgattacgttaaagtctcactctgttctttcaaagtatgacgaggaaatt
gatggcgaaaagaaaaagagcttccggttgaatactgggggctttgctgacggggaacga
gagcgggagatccaggccatgagagagactctgcgaaaccaggcccagaccttggaaatg
cctgccctcgccatcgcctcagagtattacacacctcaggaaatggtgggcttcaaaaag
ataaaatccagagtgaggaagatcaggaagaaggaaaagcagacagctgcagatgaactt
cgcatcgacgacacccgcagtactgactttggctccagatcacggggtcggggccgcaga
aaggtggatattgatggcgaggaaataaaggaggaggagggggaggagaaggagaaagag
gagagcaaaccgccacacattatccccctgttgtccgatgacatcagaatggcagaaatg
gagatgagcgatgatgatgatttcacaccccccgagccagctgtaattgaggaggacgag
gccgagctggagctgcagaaacaactggagaagcagaggaagctgaggcaaaagcagctc
ctcaaagactctggggagaaggtggcagagcagatcaaagagcttgataaaggcgagagt
gacaatgatcctgaaaggaagaacaacattgttttcaacgcaacctcagagttctgcaga
actctgggagatattccaacttatggactgtccggtaacagagaggaccaagaagaaatt
atggacttcgaacaggaggaagagaaggatgatgctggaggctcggactcagaaattgat
gaaaatattggatggagcacagttaacttggatgaggagataaaacaacccgacttcgcc
acagcctctgccaccattttagatgaagagcccattgtcaactccggccttgctgctgcc
ttgcatttgtgcaagaacaaaggtctgctggacactcaaatgcagaaggtggcccgcgtc
aaagcaacaaagggcgccctgcccaatgacaactactgcatcgaggacaaaatgggcttt
gatgacaagtacagtcgccgagaagaatacagaggcttcacacaagatttcaaggagaag
gataagtacaggcctgatgttaagattgagtatgtggacgagtctgggcggagactcact
ccaaaagaagctttccggcaactttctcaccgattccacgggaaagggtctggaaagatg
aagacggagaggaggatgaagaaacttgaggaggaggccctgctgaagaagatgagcagc
agtgacactcctctggggaccgtggctctgcttcaagagaaacagaaatctcagaaaaca
ccatatattgtgctaagtgggagtgggaaaagtatgaacgcaaacaccatcactaaataa
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