Hippoglossus stenolepis (Pacific halibut): 118120871
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Entry
118120871 CDS
T08308
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
118120871 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hsp03051
]
118120871 (psmd1)
Proteasome [BR:
hsp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
118120871 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Zip
Nop52
CIS_TMP
Atrophin-1
PA26
Piezo_TM1-24
Cnd1
Motif
Other DBs
NCBI-GeneID:
118120871
NCBI-ProteinID:
XP_035032175
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All DBs
Position
14:complement(11670215..11703868)
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AA seq
982 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLDSIVNDFWAEISGSVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFEESLNYALGAGELFNVTDNSEYVETIIAKCIDHYTKLRVENAELPE
EEEKKSIDPRLEGIVNKMFLRCLDDHKYKQAIGIALETRRLDMFEKTILESTDVSGLLAY
SLKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPTPDKDSDAMET
DDKAGSSPAGKPAETKDEPKDQNAKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGAL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYSVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFILFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALISSALIMIQQSEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKKEKEEEKMEVEVQEAEKEKKDEKEKEKEKEKEKEKEKEKEKEKEKEKEKKKEA
EPNFQLLENPARAMPAQLKVLNMPETCRYQPFKPLHTGGIIIMKDTSEEEEELVEPVSAH
GPKIEEEEQEPEPPEPFEYIDE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgataacatctgccgctggaattatttccctccttgacgaggaagagccgcagctcaag
gagtttgctctgcacaagctagactccattgtgaatgacttctgggctgagatttcggga
tctgtagataaaattgaggtcttgtatgaggatgagacgtttcggagtcgagcattcgct
gccttggtggcttctaaggttttctaccacctgggagcctttgaggaatctctgaactac
gctcttggtgctggtgaactcttcaatgtcacagacaactcagaatatgtggagaccatc
attgccaaatgcattgaccactacaccaagctgcgggtcgagaatgccgagctgccagag
gaggaggagaagaaaagcattgatccccgcctcgaagggattgtcaacaagatgtttctg
cgttgccttgacgatcacaagtacaagcaggccattggcatcgccttggagaccaggcgc
cttgatatgtttgagaaaaccatcttggaatcgactgatgtgagcgggctccttgcctac
agcctgaaagtgtgcatgtcgctaatgcagaacaagaaattccgtaatgaggtgttgcgc
gtgctggtcaagctctacatgaacttggagaagcctgatttcatcaatgtctgccagtgc
ctgatattcctggatgacccacaggctgtgagcgacatcctggagaagctagtgaaggag
gacaacctgctgatggcctatcagatctgctttgacctgtacgagagcgctagccagcaa
ttcctctcctctgtcatccagaacctgaggactgttggaacaccgattcccgctgtacct
ggctctacaaatacaggaactgtgccaacgcctgacaaagacagtgatgcaatggagaca
gatgacaaagctgggagctcccccgctggaaagccagcagaaacgaaagatgagcccaaa
gaccagaatgccaagatgatcaaaatcctcagcggggagatggccattgagctgcacttg
cagtttctaattcgaaataacaatacagatctaatgattctcaaaaacacaaaggacgca
gtccgaaattctgtgtgccacacagccacagtaatagccaactctttcatgcacacagga
acaacaagtgaccagttcctcagagaaaacttagaatggcttgcgagagccaccaactgg
gcaaagttcacagcaacagcaagtctgggtgtcatccacaagggccatgagaaagaggct
ctccagttaatggccacgtacttgcccaaagacacttcccctggctcagcctaccaggaa
ggaggaggcctgtacgctctgggactcattcatgccaaccatggtggcgacattatcgac
tacctgctcagtcagctcaagaacgcaagcaatgatatcgtccgtcatggtggtgctctt
ggccttggcttggctgctttgggcacagccagacaggatgtttatgacctcctcaaatcc
aacctgtaccaggatgatgctgtaactggtgaagctgcaggtctggctctgggtctcgtc
atgttgggctccaagtcggcccaggccattgaggacatggtcggctatgctcaggagacg
cagcatgagaagatcctgcgtggcctggcagttggaatcgccatggtgatgtatggacgc
atggaggaggctgatgccctcattgaaagcctctgcagagacaaggaccccatcctgcgg
cgctctggaatgtactctgtgggaatggcctactgcggctctgggaacaacaaggccatt
cggcgtctgctacatgtcgctgtgagtgacgtgaacgacgacgtcagaagggctgctgtc
gagtccatcggcttcatcttgttcaggaccccggagcagtgtcccagtgtggtgtctctg
ttgtccgaaagctacaaccctcatgttcgctgtggagctgccatggctctgggcatctgc
tgtgctgggacaggcaacaaggaggccatcaacctgctggagcccatgaccaatgaccca
gtcaattatgtcaggcagggggccctcatttcctcagccctcatcatgatccaacagtct
gaagtcacttgtcccaaggtgaaccagttcaggcaactttattcaaaggtcatcaacgac
aagcacgatgacgttatggccaagttcggcgccatcctcgcccagggaatcctcgatgca
ggtggacgtaacgttaccatctctctgcagtccaggaccggtcacactcacatgccgtcg
gtggtcggcctgctggtcttcacccagttctggttctggttccccctctcccacttcctg
tcattggccttcacaccaactgctattattggcctcaacaaggacctcaagatgcccaag
gtgcagtaccgctccaactgtaagccctccaccttcgcctacccaccagccctggaagtt
ccaaaggagaaagagaaggagaaggtatccactgctgttctctccatcacggccaaagcc
aagaaaaaggagaaggaaaagaaagaaaaggaggaggagaagatggaagtggaggtccag
gaagccgagaaggagaagaaggatgagaaggagaaggagaaagagaaggagaaggagaag
gagaaagagaaggagaaggagaaagagaaggagaaagagaaggagaagaagaaagaggca
gagccaaacttccagctcctggagaatccggccagagcgatgccagctcagctcaaagtc
ctcaacatgcccgagacctgccgataccagcccttcaaaccgctccatacaggaggcatc
atcatcatgaaagacaccagtgaggaggaggaggagctggtagagcccgtctcagcccac
ggccccaaaatcgaggaggaggagcaggagcccgaaccccccgagcctttcgagtacatt
gacgagtag
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