Hippoglossus stenolepis (Pacific halibut): 118120876
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Entry
118120876 CDS
T08308
Name
(RefSeq) calpain-2 catalytic subunit isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
hsp04210
Apoptosis
hsp04217
Necroptosis
hsp04218
Cellular senescence
hsp04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118120876
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118120876
04217 Necroptosis
118120876
04218 Cellular senescence
118120876
09144 Cellular community - eukaryotes
04510 Focal adhesion
118120876
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118120876
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
118120876
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C2: calpain family
118120876
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Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
118120876
NCBI-ProteinID:
XP_035032193
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Position
2:30856166..30870051
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AA seq
698 aa
AA seq
DB search
MAGVASTLAKQRALAAGFGTNANAVRYLNQDFGSLRAKCRSAGRLFCDPTFAAAPESLGF
KELGQSSHKTRGVTWKRPTELVSNPEFILGGATRTDICQGALGDCWLLAAIASLTLNEYV
MARVVPTDQGFGDDYAGIFHFQFWQYGEWVDVVIDDRLPVKDGELMFVHSAEGREFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLKQPPSNLFQIIKKSLEAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVNYRGRQEKLVRIRNPWGQVEWTGAWSDG
SSEWNSVQGDCPNANAEDGEFWMSYSDFLRHYSRIEVCTLTPDTIEDDSVKHWSVSTFDG
TWRRGSTAGGCRNNPYTFWTNPQFVIKLDEEDDDPDDGEVGCSFVVGLIQKNRRKLRKQG
EDMHTIGFAIYEVPKQFQGQREVHLDKNFFLSHAQTAKSETFINLREVSSRFKMPPGEYL
IVPSTFEAHLNGDFCIRVFSEKQSETQPCDDPVEAELEDETVSDEEVDAGFRGLFSKLAG
DDMEISAVELKTIMNKIVGKRTDIKTDGFSMETCRVMVNLMDQDSGNGKLGLGEFATLWK
KVQRYLSIYKKNDSDNSGTMSTPEMRVAFKDAGFSLNNTIYQQLVARYSDPDMTIDFDNF
VGCLMRLEMMFNIFRKLDAHNSGSIELDFNQWINFAMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtggcctccactctggccaagcagcgcgccttggccgcgggcttcgggacc
aacgcgaacgcggttcggtacctgaaccaggacttcggctcgctccgggccaagtgccgc
tccgccgggcggctcttctgcgacccgacgttcgccgccgcccccgagtctctgggcttc
aaggagctgggccaaagctcccacaagacccggggcgtcacctggaagaggcccacggag
ctcgtctccaatcctgagttcatcttgggcggagccaccaggacggacatctgccaggga
gctctgggtgactgctggctgttggcggccatcgcttccctgaccctgaatgaatatgtg
atggccagggttgttcccaccgaccagggcttcggtgacgattacgccggcatcttccac
ttccagttctggcagtacggggagtgggtggacgtggtgatcgatgatcgtctgcccgtc
aaagatggagagctgatgttcgtccactcagccgaggggagggagttctggagcgctctg
ctggagaaggcctacgccaaagtgaacggctgctacgaggcgttgtccggaggttcgacc
accgagggcttcgaagatttcacgggaggcatcgctgagaactacgacctcaaacaacct
ccgtccaacctgttccagatcatcaagaagtccctggaggctggagcgctgctgggctgc
tccatcgacataactagcgccgcagactctgaggccgtcactcgccagaagctggtgaaa
ggccacgcctactcactgaccggcgccgtcgaggtgaactaccgtggtcggcaggagaaa
ctggtgaggataaggaacccctggggtcaggtggagtggaccggagcctggagcgacgga
tcgtccgagtggaactctgtgcagggagactgtccaaacgcaaacgctgaggacggagag
ttctggatgtcctacagtgacttcctgcgtcactactctcgtatcgaggtttgcaccctg
acccccgacaccatcgaagacgactccgtcaaacactggagcgtcagcacgtttgacggc
acctggaggagaggatccaccgccggaggctgcagaaacaacccctacacattctggacg
aatccacagtttgtgatcaagctggatgaggaggatgatgacccagatgatggtgaggtg
ggctgcagctttgtagttggtctgatccagaagaaccgcaggaagctgcggaaacaagga
gaggacatgcacaccatcgggtttgccatctacgaggttcccaaacagttccaggggcag
cgtgaggtgcatctggataagaacttcttcttgagccacgctcagacggcgaaatcagaa
accttcatcaacctgcgcgaggtcagttctcgcttcaaaatgcctccaggagaatatctg
atcgtcccatccacattcgaggctcacctgaacggagacttctgcatccgagtgttctcc
gagaaacagtcagagactcaaccgtgtgatgatccagttgaagctgagcttgaagatgag
acggtgtcagatgaggaggtggacgcaggatttagaggcctcttctctaaactcgccgga
gatgacatggagatttctgcagtggagctgaagaccatcatgaacaagattgtcggcaaa
cgaactgacatcaaaactgacggcttcagtatggagacgtgcagggtgatggtcaacctg
atggaccaggacagcgggaacgggaagctcggtctcggagagttcgccacactgtggaag
aaggttcagagatacctgtccatttacaagaagaacgactctgacaactctgggacaatg
agcactccagagatgagagtcgccttcaaagacgcaggtttctccctcaataacaccatc
taccagcagctggtggctcgatactccgaccccgacatgaccatcgacttcgacaacttt
gtgggatgtctgatgaggctggagatgatgttcaatatcttcaggaagctcgacgctcac
aacagcggttccatcgagctcgacttcaaccagtggataaacttcgccatgatctga
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