Hippoglossus stenolepis (Pacific halibut): 118120886
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Entry
118120886 CDS
T08308
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
118120886 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
118120886
NCBI-ProteinID:
XP_035032215
LinkDB
All DBs
Position
2:complement(21325512..21357081)
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AA seq
3137 aa
AA seq
DB search
MAGCLQSSQLCKKWAFLRCLLVTFSFSFCFASAKAEPFDPAHLYRHRSGPNEDNIIIANN
GIRVPFGRSVYLDPVSDLVTEVQPGDRCHITVLDNDPLAQKPGMLTPKKFPCSFGPDEVK
YTHFGSRSPSKDRVKLQLRYDSQTDTVIIPFMLEVEVVFQQLEILTRNMPINVEKFNGDS
NPIDKKGLEFSFEDGVTQCKITTLVGAGGLPRYGTLLNNPNNGQLIDCDEFVKKGLRYKH
TAKTKSPNRDYIPMMVELQDNDGNTIMQEHFQMMVRIREGSENSGPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDVESDPDDLIFNITSYLSPQQGYIISTDDQNLPITSFYQRDIKDLK
IAYKPPSEDSEVERIFQLEFEIVDTDGAVSDTFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSSQNLEISDEDNLEDVTITVVDGLKHGELTMLGSRRKFFTPADLDAGIVVYQHD
GSDTYSDNIIFRMTDGSNEVEFLFPITIAPTDDEPPIINANTGVVLFKNEVMQISPFILS
ATDIDSEDSTIKFVLEVPYSTVGELLLRQVEPPSDPSTWKFSETDEMFEQVVTEWFQQDI
LDGKLFYRHIGPHSTTTVIDQFVFRVQDDNDPPNQSGEHMFTIKIHPVDDLSPELFPGTT
LHMTVQEYELTHFKKKFLCYSDLDSDDRDLKYTIVKPPTDTDENNPAPLGEIVLTDSPDT
LITEFTQAQVNHHKVAYMPPDQELGITPKVAQFTFIVEDTAGNTADGLFTIFLQPVDNKP
PVITNTGFTVMERNTYIITRKELHATDTDTDDENIVFTVTQIPRYGQLQYFGIDMSNGET
FVLEDVANGRLAYLHGGEESVNDLIKLDVSDGFHEVPIIIKITIEPVDDETPTIMLPAGL
LGAAIDVLENGATEITSNVIQGRDEDTDDFMLTFIVEEPPRLGEILVNGAPAERFTQEDI
INGVVVYAHTSGEIGPVRGYDSFNLTLSDMSDQWVVGGNKVQGVTVYVTILPVDSIPPIV
SVIEQFVVVEGEKNVITLDHIQAEDIDTDNDDILCTIIVQPTSGYVENIAPAAGSEKSRA
GTAITAFSIKDVAQGHIHYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPANDE
KPEIFIREFVVMEGMSLVIDTPILNAADSDIPGDELYFEIIKNPTHGTIVQQLSTGTIPV
DTFNLEQIKEASNIVYEHDDSETKEDSFEIRLSDGKHKVEKTVLIMVIPVDDETPRMAIN
DGLEVEIGETKVISNRVLKATDLDSEDKDLMYIVRYGPGQGYLQRISKFGDVLGNITLGM
NFTQNEIDKQLIQYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGRVTLTTDLLSTTDINSPDEYLSFSITRAPSRGHLESTDYPGVPISTFTQLQLA
GNKIYYIHTSDDEMKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTINRLVVEEGET
KLVTPFELTAEDRDTPDNHLRFIVTQVPVHGQLLFNKTQPITTFTKQDLNENLISYKHDG
TETNEDSFSFTVTDGTHTDFYVFPDTVYETRKPQMMTIHINTVDNGVPQIVVNKAAASLK
VMQTGHVGFVITSKALRSEDRDSANRVLKYSVSEAPLHGFIMNTAQGNDSIKTFTQADIN
DMKICYVLLDKTNATSDIFYFTVEDNGGNKLKPQPFRLNWAWISLEQEYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDGTAKNDKDFRGKAQKQVQFNPGQTTATWRVKIITDQEFE
ISETFEIQLSDPVMAVLEFPDIATVEIVDPGDESTVFIPQAEFKIEEDIGELLVPVRRSG
DASQELMVVCFTQQATATGTMPSTVLSYSDYITRPEDHTSVLRFDKDEREKLCRIIIIDD
SLYEEEESFNISLSMPMGGQVGANFPSARVTILADSDDEPSLYFGEPEYIVDESSGYVEV
KVWRTGTDLSKTATVTVRSRKSEPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPELEGPETFDLVLRMPMNAVLGEPSKTTITINDSVTDLPKVQFKEGSYKVDESDSEVKA
IVYRSGDISLVSTVRCYTRQGSAQVMMDYSERPNTDASIITFQPGETEKPCVVSLMDDTV
HEEDEEFRLVLGSPKSKSPYGASVGEQKEALVTVTDEKDKPIIRFAEIKYSIREPQVKGD
VAIVKIPILRIGDTSKVSVVRVHTKDGSATSGEDYNPLSEDVEFKEGEKEHFVEIEILYD
GQREMREAFIVHMKPDDNMVAEVQMNKAIVYIEEMDSVADVTFPAVPQVVSLLMYDDTVK
TKDKPQPQNGYPVVCVTACNPKYNDFDKTGSICSSENINDTLTQYRWLVSAPTGSDGVTS
PMREVDTNTFFTNTKSITFDSIYFQAGSRVQCAARAFNANGDAGLELSSPIAVISKEEGM
CQPRVQGTVGAEPFSAKIRYTGPDDPDFPNLIKLTVNMPHMDGMLPVISTRHMSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETSPYQYSNIMRSANSLRFYR
NLNLEACLWEFTSYYDMSELLNDCGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPESELQGAMYPTSMRINEEGRLVVHFKTE
ARFRGQFVMSHPGSSVSSMVMCADHPGLTFTLGLVRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKMTPCIASPNGEFSIPPVCHPREPLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
KELWLSDGSLGFGEGTDAAFSDGSMIYGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTNKEYGCLADASTLLYRFKILDKAQPDTQASAFGDVAFKATLAQDTAGALSLVRQP
GSDGFTLSSSPLFQVAAGREWFIHTIYTVRSKENANRNIGKRSVEYLHHSVSSAEQPHTR
HRRAAPALSSPNVPQDIGVDNNRGTNMQHIALDRADRMVVSQRQPWSPNHDALLERPQLE
SSGREPADTSTLPMLVGLIGLVLLVCLIATVVILLLRRKRREKSSQFPPYTTSSSSAYGG
HSQGPAGMWSSSDSSEV
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaagttcccaactttgtaaaaagtgggcatttttgagatgcctg
cttgtgacattttcttttagcttctgttttgcctcagcaaaggctgaaccttttgaccct
gctcacctctatcgccacagatcaggacctaatgaagacaacatcatcattgctaacaac
gggatcagggtgccttttgggaggtctgtatatctagaccctgtgagtgacctggtaaca
gaagtgcagcccggcgaccgctgccacatcacagttttggacaatgacccactggcccag
aaacctgggatgctgacccccaaaaagttcccctgctcctttggaccagatgaggtgaag
tacacacattttggatctcggagccccagcaaggaccgtgtgaagctgcagctacgttat
gactcgcagacggacacagttatcatcccgttcatgctggaagtggaggtggttttccag
cagcttgagatcctcaccaggaatatgcctattaatgtcgaaaagttcaacggtgacagc
aaccccattgacaaaaagggtctggagttttcctttgaggacggtgtcacgcagtgtaag
atcaccactctggtcggcgctggaggacttcccaggtatggcactcttttgaataacccc
aacaacggccaattgattgactgtgatgagtttgtgaaaaagggccttcgctacaagcac
acagctaaaaccaagtcaccaaacagagactatattccaatgatggtggagctgcaggat
aatgacggcaacactataatgcaagaacatttccaaatgatggttagaatcagagagggt
tcagagaacagcggtcctaaacccagctttgtagccatgatgatgatggaggttgatcag
tttgtgatgacagctattacaagcgacatgctggctgctgaagatgtcgaatctgaccct
gatgatttaatcttcaatattacttcatatctgagccctcagcagggttacatcatcagc
accgatgatcagaacctgcctatcacctccttctatcagagagacatcaaagatcttaaa
atagcctacaaacccccctcggaggactcggaggtggaaaggattttccagcttgagttt
gaaattgttgacactgatggtgccgtgtctgatacatttgcttttatgattgtggtgaag
cctatgaatacactggctcctgtagcaaccaaaaatacagggcagctattgtttgaaggg
cagtcccgggcgctctccagctcccagaatttagagatcagtgatgaggacaacctagaa
gacgtgacaattactgttgttgatggcttaaagcacggagagctgaccatgcttggtagt
cgcaggaaattcttcacacccgccgacctagacgccggcatcgtggtgtaccaacacgac
gggagcgatacctacagcgacaacattatttttagaatgactgatggcagtaatgaagtg
gagtttttgttccctatcactattgctcccactgatgatgagcccccgattatcaacgct
aacaccggtgtggtgcttttcaagaatgaagtcatgcagatctctcctttcattctgagc
gcaacagatatcgattcagaagactccaccattaagtttgtcttggaggttccttactcc
actgtcggggagctgctgctgagacaagtcgagcctccatccgatccgtctacctggaag
ttcagtgaaacagatgagatgtttgagcaggtggtaactgagtggtttcagcaggatatt
cttgacggaaagctgttctatcgtcacatcggaccccacagcaccaccactgtgatcgat
cagtttgtgttcagggtccaagatgataatgaccctcctaatcagtcaggcgagcacatg
ttcaccatcaaaatccatcctgttgatgacctctccccagagcttttcccaggcaccacc
cttcacatgacagttcaggagtatgagctgacacacttcaagaagaaattcttgtgctac
agtgatttggattcagatgacagggacctcaagtatactatcgtcaagcccccgactgac
acagatgagaacaatccggcccccttgggcgagatcgtactgactgatagtcctgacact
ttaattacagagttcacacaggcccaggttaatcaccataaagtagcttacatgcctcca
gaccaggagctgggcatcactccaaaagtggctcagttcacattcattgtggaagacaca
gcaggtaacacagcagatggactattcaccattttcttgcagcctgttgacaacaaacca
ccagttatcacaaacacagggtttactgttatggaaagaaatacatatatcatcactagg
aaggagctgcatgccactgacacagatacagatgatgaaaatatcgtctttactgtgacc
cagattcctcggtacgggcagctgcagtattttgggatcgacatgtcaaacggtgaaaca
tttgttcttgaagatgttgcaaatggccgtctggcttatctccatggtggagaagaatct
gttaatgatcttatcaagcttgatgtaagtgatggtttccatgaggtacccatcatcatt
aagatcaccatcgagcccgtcgatgatgagacccccacgattatgctcccagccggcctg
ctcggtgccgccatcgatgtcctggagaatggagcaacagaaattacaagtaacgtgatt
cagggccgtgacgaagacacagatgacttcatgcttacttttattgttgaggaacctccc
aggctgggtgaaatcctggtcaacggtgcaccagctgagagattcacccaggaagacatc
attaatggtgtggtagtgtatgctcacacatccggtgaaatcggtccggtcagagggtac
gactccttcaacctcactctgtctgatatgtccgatcagtgggtcgttggcggcaacaag
gtccaaggtgtgacagtttacgtcaccatccttcctgttgacagcattccacctattgtt
agtgtcatagagcagtttgttgttgttgagggagagaaaaatgtcatcactctggaccac
atccaagctgaagatattgacacagacaatgacgatatcctgtgcaccatcatcgtccaa
ccaacatctggttacgtggaaaacatcgcccccgccgcaggctcagagaaatccagagca
gggacagctatcacagcattcagcattaaagatgttgcccaaggtcatatccactatgtc
caaagcatccacaaaggtgttgaaccggtagaagatcgtttcacatttcgttgttcagat
ggtattaatttctctgaacgccatttcttccccatagtcatcattccagccaatgacgag
aagcctgaaattttcattcgagagtttgtggtaatggagggtatgagcctcgtaattgat
acaccaattctgaatgcagctgattctgatatccctggggatgaactgtactttgagatc
atcaaaaaccccacacatggtacaatagttcagcagctcagcactggcaccatccctgta
gatacattcaacttggaacaaatcaaagaggcgtccaacattgtctacgaacatgacgac
tctgagaccaaagaggacagctttgaaatcagactctcagatgggaaacacaaagtggaa
aaaacagttcttatcatggttattcccgttgacgatgagacgcccaggatggctataaac
gatggccttgaagtggagatcggagagacaaaagtcatcagcaacagggttttaaaggcc
acagatctcgactctgaagacaaagacctcatgtatattgtgcggtacggccctggacaa
ggctacctccaacgaatcagcaagtttggtgatgttttaggtaacatcacgctggggatg
aatttcacacagaatgaaatcgacaaacagctcattcaatatgtacacaccggccaggag
ggaatccgagacctgttgaaatttgacgtcacagatggaatcaatccccttatcgatcgt
tacttttacattaacatcggaagcattgacatggtcttcccagacgtaatcaacaaaggc
gtgactctcaaggaaggggggagagtcactctcaccactgacctcctcagcaccactgac
atcaacagtcctgatgaatatctcagctttagcatcacaagagcgccaagcagaggccac
ttagagagcaccgactacccgggtgttcccatttccaccttcacccaactgcagcttgcg
ggcaacaaaatctactacatccacacctctgatgatgagatgaaaatggacagcttcgag
ttcgaggtaacagacggttacaatcccgtcttccgaaccttcagagtgtccatcactgat
gtagataacaagaaacctgtcctgactataaacaggctggttgtggaggagggagaaacc
aaactcgtcacgccatttgagttgacagccgaggatcgggacacacccgacaaccatttg
cgcttcatagtcacccaggtgccagtgcacgggcagctgcttttcaacaaaacccaaccg
atcacaacctttaccaagcaggacctaaatgagaatctgatcagctataagcacgacggc
actgagaccaacgaagacagcttctccttcacggtcacagacggaacacacacagatttt
tacgtctttcctgacaccgtgtacgaaacacgcaaaccccagatgatgaccattcacatc
aacacagtggacaatggtgtgccccagattgtggttaataaggctgcggcctcactgaag
gtcatgcaaactggccatgtgggctttgtgataaccagcaaggcccttcgctcagaggac
cgcgacagtgccaacagggtcctgaagtacagtgtgtctgaggcgcctctgcacggcttc
atcatgaacactgcccagggcaatgacagcatcaagaccttcacacaagctgatatcaat
gacatgaagatctgttacgtgctgctggataagaccaacgccacaagtgatatcttctac
ttcacggttgaagacaacggtggaaacaaactcaagcctcagcctttccggctcaactgg
gcctggatctctctggagcaggaatactacctggtggacgaggacgccaaattcctggag
gtgacactgaagcgcagaggatacctgggggaaacctcctttgtcagtattgccacgaag
gatggcaccgccaagaatgataaggacttccgtggtaaagctcagaaacaggttcagttc
aaccctggtcagaccacagcgacttggagggtgaagatcatcaccgaccaggagttcgag
atctcggagaccttcgagatacagctgtccgacccggtaatggcggtgctggagtttcca
gacattgccacagtggagattgtggatcccggagatgagtcgacggtgtttattcctcaa
gcagagttcaagattgaggaggatattggggaactgctggtaccagtgagacgctcggga
gacgccagccaggaactcatggtcgtttgtttcactcagcaagccacggccaccggcacc
atgcccagcactgtcctgtcctactccgattacatcacgcggcctgaggaccacaccagc
gtgctgcggttcgacaaagacgagcgtgagaaactctgtcgcatcatcatcatcgacgac
tcgctgtatgaggaggaggagagcttcaacatcagcctcagcatgcccatgggcggccag
gtgggcgccaactttccatccgccagggtcaccatcttggcagacagcgatgatgagccc
tcgctgtactttggggaaccagagtatattgtagacgagagttcaggctacgtcgaggtg
aaggtttggaggacagggactgatctgtccaagacggccactgtcaccgtgcgctccaga
aagagtgaacccgtctctgcagaagccggactcgactacgtcggcattagtcgcaacctc
gacttcgctcccggagtgacgatgcagacgttcagagtgaccatcctggacgacctgggt
cagccggagctggaggggccagagacctttgacctggtgttacggatgcccatgaatgcc
gtgctaggagaaccaagcaagaccaccatcaccatcaatgatagcgtcactgacttgccg
aaggttcagtttaaagaaggcagctacaaggtggatgagtctgacagtgaggtaaaagcc
atagtgtaccgcagtggagacatcagcctcgtgtccacggtgcgctgttacacccgccag
ggctctgctcaggtcatgatggactacagtgagaggcccaacaccgatgcatccatcatc
accttccaaccaggtgagacagagaagccgtgtgtggtcagcctgatggacgacaccgtc
cacgaggaggacgaggagttccgcctggtcctgggatctccgaagagcaagtctccgtac
ggagcctctgtcggggagcagaaggaggcgctggtcacagtcacagatgagaaagacaag
cccatcatccgtttcgctgagatcaagtacagtattcgtgaaccccaggtcaaaggtgat
gtggcgatagtgaagattcctatcctgcgtatcggagacacatccaaggtctcagtagtg
agggtgcacaccaaagacggctctgcgacctctggggaggactacaacccgctgtcagag
gatgttgagttcaaggagggtgagaaggaacactttgtggagatcgagatcctctacgac
ggtcagagagagatgagagaggccttcatcgtgcacatgaagcctgacgacaacatggtg
gctgaagtacagatgaacaaagccatcgtctacattgaggagatggacagtgtagcagac
gtcaccttccctgcagtgccgcaggtggtctccctgctcatgtacgatgacactgtgaaa
accaaagacaagccccagccacaaaacggataccctgttgtttgtgtgacggcctgcaac
cctaagtacaacgactttgacaaaactggctccatctgctcttcggagaacatcaacgac
accctcacccagtaccgctggctggtcagcgctcccaccgggtccgatggtgtgaccagc
cccatgagggaggtggacaccaacactttcttcaccaacaccaagtccatcacctttgat
tcaatctacttccaagccggctccagggttcaatgtgcggcgagagccttcaacgccaac
ggagacgcaggcctggagctgtccagtcccatagctgtgatcagcaaggaggagggtatg
tgtcagcctcgcgtccaagggacggtcggagccgaacctttctctgctaagatccgttac
accggcccagatgacccagacttccccaacctcatcaaactaactgtcaacatgcctcac
atggatggcatgttgccggtgatctccacacgccatatgtccaacttcgagctcaccctg
agcccggacggcacacgtgtgggaaaccaccgctgctccaacttactggacttcaatgag
atccaaacgggccacggcttcatcaccgacgccacaaagaacccggagatcatcggcgag
acctcaccctaccagtacagcaacatcatgcgttcggccaactctctgcgcttctacagg
aacctcaacctggaggcctgcctctgggagttcaccagctactacgacatgtcggagctt
ctgaatgactgcggaggctccatcggcacagatggacaggtgctgaacctcgtccagtcc
tacgtcaccttgcgtgtcccactcttcgtgtcctacgtcttccactctcccgtggctgtg
ggaggctggcagcatttcgacctgcagtccgagctcaaactcaccttcgtgtacgatacg
gctattctgtggcaggacggaatcggcagccctcctgagtctgagctgcaaggagccatg
taccccaccagcatgcggataaatgaggagggccgtctggttgtccacttcaagaccgag
gctcgcttcaggggacagtttgtgatgtctcatccagggagcagcgtgtcctccatggtg
atgtgcgccgaccaccccgggctgacgtttaccctcggcctcgtcaggactgagcccacc
tacaaccagccaatgcagcagtggagcttcgtctcagactttgctgtgcgagattactct
ggaacctacacggtgaagatgaccccctgcatcgcctcccccaacggagagttcagcatc
cctcctgtctgccacccaagagagcctctgacctttgacatggacattcgcttccagcag
gtgagcgacccggttgcagcagagttcagcctcaacactcagatgttcctgttgtccaag
aaggagttgtggttgtccgatggctccctgggcttcggagaggggactgatgctgctttc
tcagacggctccatgatctacggccgtgtgatggtggacccggtccagaatctgggcgac
tcgttctcctgcagcatcgagaaagttttcctctgcacaggagcagacggttacgttccc
aaatacaacccaaccaacaaggagtatggctgcctggcagacgcttcaactctgctttac
agattcaagattctggacaaggcccagccggacactcaagcttcagcgtttggcgatgtc
gcttttaaggccacactggcccaagacacagctggagctctgtctttggtcagacagccg
gggtcagacgggttcacgctgtcgtcatctccacttttccaggtggctgccggtcgagaa
tggttcatccacactatctacaccgtccgctccaaagaaaacgccaaccgtaacatcggc
aagcgtagtgtggagtacctccatcacagcgtgtcctccgctgagcagccccacactcgc
caccgccgcgccgcccccgctctctctagccccaatgtgccccaggacatcggtgtcgac
aacaaccgtggcaccaacatgcagcacatcgctctggaccgggcggaccgcatggtggtc
agccagcgccagccctggtccccaaaccacgacgctctcctggagcgcccccagctggag
agctctggtagggagccggccgacacctccaccctgcccatgttggtggggctcatcggc
ctggtcctgctcgtctgcctcatcgccaccgtcgtcattctgctgctgcgacgcaagagg
cgggaaaagagcagccagttcccgccgtacaccacctcatcttcttctgcgtacgggggc
cacagccagggcccagcgggcatgtggagcagctcagacagctctgaggtctag
DBGET
integrated database retrieval system
