KEGG   Hippoglossus stenolepis (Pacific halibut): 118120949
Entry
118120949         CDS       T08308                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsp03036]
    118120949 (kdm4b)
Enzymes [BR:hsp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118120949 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118120949 (kdm4b)
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118120949 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 DUF7141 PHD_NSD 53-BP1_Tudor Tudor_5
Other DBs
NCBI-GeneID: 118120949
NCBI-ProteinID: XP_035032388
LinkDB
Position
14:9530180..9573229
AA seq 1232 aa
MATDMPMDTVPASSPDPTSPPVLSSSATQDRIPTQEPAIAETPHTAVSSVPDAAPDHSPA
QPADPEMAKGLVSDSELPPAPLLPPLPPVSAKNPSCKIMTFRPTMEEFKDFAKYVVYMES
QGAHRAGLAKVIPPEGWKPRRSYDTIEDMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGE
YRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIREWNIGHLNTL
LDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYAIPPEHG
KRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQNEGEFMITFPYGYH
AGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRSLQPNRYELWKQGK
DSMVLDHLKATELNSPELERWREHRVTFRENLLRRAMQKMKLFRRLKLEEVKVLAEEGIE
LNAAEYQRQLEERDAKRKQEREERLAREAMMTLEAMEREDQKAAEAAAAEAALAAETPAI
EGEDEEREAKPQNLTEDGEKKKQKKLKKISNVQNAITGFEAVFEQFAKGGIRNSDNAMVS
DPEVGNPLTPQQSDFTADNKLDACYPKMKMPTGVKKSRRHPLTKPPMLSPLSIVKQELTS
DKDLSSPVPLDSDMKKQEHLWQNHSPNFLAEKAFNAAVAPLQPYCAVCSLFCPYNSPHKD
VSSEAPVTPLPRPGSMTRPLVPEMCFSVGSGNTEPPPTNHHIGEDGTSLLLCCSSCKMQV
HASCYGVKPESVSESWMCSRCAAGAWTVNCCLCNLRGGAFKRTVDNCWVHIICAIAVAEA
RFVNAIEREPVDISAVPETRKNLKCVFCHGKNSSSNRGACIQCSNENCATSFHVTCAQIA
GVVMKPADWPYVVSVTCHRHTKVPTKSRSAPKAPPCPNLGQRVIGRNADGWYYHCTIIGM
ATQTFYEVNFDDGSYCDNLHPENLLSHDCLRNGLPEVGELIVVCTSEGQVLNAYFIKQHT
HKLYQVEFQDQTQLMLKHSEIHQLDLELPKRVRARLAINAPQDEAPPADEAKAAKRRRLP
PGPAQPTETPTNIINPPSCPLLAALVDAPAATRNSISSPTTSQPLSPPHMYPLGSPAPTN
GIHVDAETPMDTSAILREALTESSLASDPTLTPQMTPFRSTLNSDPLLSAPSPPPPPQHM
SDSYTPSSSYVSYMETLLHSHFPQDDGPGPLY
NT seq 3699 nt   +upstreamnt  +downstreamnt
atggctaccgacatgcccatggacacggtgcctgcctcatccccagacccgacctcacct
cctgttctcagctccagtgcaacccaagaccggattcccacccaggagccagccatagct
gaaacccctcacacagcagtgtcctcagttccagatgctgctccagatcacagcccagct
cagcctgccgacccagagatggccaaaggacttgtttctgactcggagctgcccccagcc
cctctgctgccacccctgccaccagtcagtgccaagaaccccagctgcaagatcatgacc
ttccggcccaccatggaggagttcaaagacttcgccaaatacgtggtctacatggagagc
caaggagctcaccgtgccggcctggcaaaggtgattcccccagagggctggaagccgcgg
cgctcctacgacaccatcgaggacatggtgattccagctcccatcatgcaggtagtgact
ggtcagtcgggtctgttcacccaatacaacatccagaagaagtctatgaccgtgggcgag
taccgcaagctggccaacagcaagaagtactgcacaccccgccacaaagactttgacgac
ctagaaaggaaatactggaaaaatttgacatttgtgtcacccatttatggtgcagatgtc
agtggctccatctatgatgaggacattcgagagtggaacattggccacctcaacacgttg
ctggacatggtggagcaggagtgcggcatcgttattgagggtgtcaatactccttatctg
tatttcggcatgtggaagaccacatttgcatggcacactgaggacatggacctctacagc
atcaactacctgcacttcggacaatccaagtcctggtacgccatcccacctgaacacggc
aagaggctggagaggctggcacaaggattcttccctggcagttcccaaggctgcgatgct
ttccttcgccacaagatgacgctgatatctccatccatcctaaagaaatatagcattcca
tttgacaggatcactcagaatgaaggggagttcatgatcacctttccgtatggctaccat
gccggcttcaaccacggcttcaactgtgcggagtccacgaactttgccaccctgcgctgg
gtagactacggcaagatggccacccagtgcacctgtcgtaaggacatggtgaagatctcc
atggacgtgtttgtgcgcagcctgcagcccaatcgctacgagctgtggaagcagggcaag
gactccatggtgttggaccatctcaaggccactgagctcaacagccccgaactcgagcgc
tggagggaacatcgcgtcactttcagagaaaacctcctgcgaagggccatgcagaagatg
aaactgttccgtcgtctgaagctggaggaagtgaaggtgctggcggaagaaggcattgag
ctgaacgctgccgagtaccagcgtcagttggaggaacgcgatgccaagcgcaagcaggag
agggaggagcgtttagccagagaggccatgatgaccctggaagccatggagcgtgaggat
cagaaggccgctgaggcagctgcagctgaggcagctttagcagctgagactccagccatt
gaaggtgaggacgaagaacgtgaggccaagccacagaacctgacagaagacggtgagaaa
aagaagcagaaaaagctaaaaaagatttcaaacgtccaaaacgccatcactggatttgag
gcagtgtttgagcagtttgcgaaaggcggcataaggaattcagacaacgccatggtcagt
gatccagaggtggggaaccctcttaccccacagcagagtgacttcacagcagacaacaag
ctggatgcatgctaccccaagatgaagatgccaactggggtgaaaaagagtcggcgtcat
cccctcaccaaacctcccatgctctcccctctgtccatcgttaagcaagagctgaccagt
gacaaagatctgtcctcccccgtgccgctggacagtgacatgaagaaacaggagcacctg
tggcagaatcactcacccaacttcctcgcagagaaggccttcaatgctgcagtggcacca
ctacaaccttactgtgctgtctgttcactcttctgtccctacaactcgccacataaagat
gtgtccagtgaggccccagtcacccccctcccccgtccgggcagcatgactcgcccactg
gtcccagagatgtgcttcagcgttgggtcaggaaacaccgaacctccacccaccaaccat
cacattggagaggatggaaccagtctcctgctttgctgttcatcttgcaaaatgcaggtt
cacgccagttgttacggtgtcaaaccagagtctgtcagtgagtcctggatgtgttccaga
tgtgcagcaggagcttggacagtgaattgctgtctttgcaacctgcgtggaggagctttt
aagaggaccgtggacaactgttgggtccacatcatctgtgccatcgctgtggctgaggct
cgctttgtcaacgccattgagagggagccagtggacatcagtgctgttccagaaacgcgc
aagaatctgaagtgcgtgttctgccacggcaagaactccagttcgaaccgtggcgcctgc
atccagtgctcgaatgagaactgcgccacctccttccacgtcacctgcgcccaaatcgcc
ggagtagtcatgaaacctgcggactggccctacgtggtgtccgtcacctgccacaggcat
acgaaggtccccacaaagtcgcggtcagcacccaaagccccgccctgtccaaacctgggc
cagagagtgattggccgcaacgctgacggctggtactaccattgtaccattatcggcatg
gcaacgcagacgttctacgaggtcaactttgacgacggctcatactgtgacaacctgcac
ccagaaaacttattgagtcacgactgcctgcggaacggtctccccgaagtcggggagttg
atcgtggtctgcacgtccgagggtcaggtcctcaacgcttacttcataaagcagcacacc
cacaagctctaccaggtcgagtttcaggaccagactcagctgatgctcaaacactcagag
atccaccagctggacctggagctgcccaaaagggttcgagcccgacttgcgattaatgct
ccccaggacgaggcccctccagcagatgaagccaaagcagccaaacgccgccgtctgccc
cctggcccagcccaacctactgagacccccacgaatataatcaatccgccctcttgcccc
ctactggcagccctggtagacgcaccagcagcaacacgcaacagtattagttcgccgacg
acctcacaacctctgtccccgccccacatgtacccactggggtcccccgccccaaccaac
ggtattcatgtggacgcagagaccccaatggacacgagcgccatcctcagggaagctcta
acagagtcatccctggcctcggaccccacgctgactcctcagatgaccccctttcggtcg
actttaaactctgaccccctcctgtccgccccgtcccctcccccgccgccccagcacatg
tccgacagctacacgccgagcagcagctacgtttcctacatggagactctgctccattca
catttccctcaggatgacgggcccggacccctgtattga

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